RNA–Protein interactions for RNA: ENST00000257879.10

ITGA7-201, Transcript of integrin subunit alpha 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGA7, Length 4,120 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-201ENST00000257879 DAXXQ9UER7 740 aaPredicted RBP24.39■■□□□ 1.5
ITGA7-201ENST00000257879 EIF4G2P78344 907 aaKnown RBP eCLIP24.38■■□□□ 1.49
ITGA7-201ENST00000257879 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
ITGA7-201ENST00000257879 FAM9BQ8IZU0 186 aa24.36■■□□□ 1.49
ITGA7-201ENST00000257879 ANP32AP39687 249 aaKnown RBP24.35■■□□□ 1.49
ITGA7-201ENST00000257879 CUX2O14529 1486 aa24.34■■□□□ 1.49
ITGA7-201ENST00000257879 MRS2Q9HD23 443 aa24.32■■□□□ 1.48
ITGA7-201ENST00000257879 RBM19Q9Y4C8 960 aaKnown RBP24.31■■□□□ 1.48
ITGA7-201ENST00000257879 PPP1R15AO75807 674 aaPredicted RBP24.29■■□□□ 1.48
ITGA7-201ENST00000257879 IRX6P78412 446 aaPredicted RBP24.29■■□□□ 1.48
ITGA7-201ENST00000257879 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
ITGA7-201ENST00000257879 ZNF326Q5BKZ1 582 aaKnown RBP24.29■■□□□ 1.48
ITGA7-201ENST00000257879 CHIC2Q9UKJ5 165 aa24.27■■□□□ 1.48
ITGA7-201ENST00000257879 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
ITGA7-201ENST00000257879 ERICH3Q5RHP9 1530 aa24.24■■□□□ 1.47
ITGA7-201ENST00000257879 RRBP1Q9P2E9 1410 aaKnown RBP24.24■■□□□ 1.47
ITGA7-201ENST00000257879 ARHGAP35Q9NRY4 1499 aa24.24■■□□□ 1.47
ITGA7-201ENST00000257879 PPP4R2Q9NY27 417 aa24.22■■□□□ 1.47
ITGA7-201ENST00000257879 KCNH8Q96L42 1107 aa24.21■■□□□ 1.47
ITGA7-201ENST00000257879 ERICH6BQ5W0A0 696 aa24.19■■□□□ 1.46
ITGA7-201ENST00000257879 RRP7BPQ9NSQ0 103 aa24.19■■□□□ 1.46
ITGA7-201ENST00000257879 CCDC136Q96JN2 1154 aa24.17■■□□□ 1.46
ITGA7-201ENST00000257879 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
ITGA7-201ENST00000257879 ARID3CA6NKF2 412 aa24.12■■□□□ 1.45
ITGA7-201ENST00000257879 ARAP1Q96P48 1450 aa24.11■■□□□ 1.45
ITGA7-201ENST00000257879 BCL11AQ9H165 835 aa24.09■■□□□ 1.45
ITGA7-201ENST00000257879 TMC1Q8TDI8 760 aa24.08■■□□□ 1.44
ITGA7-201ENST00000257879 ZBTB47Q9UFB7 747 aaPredicted RBP24.06■■□□□ 1.44
ITGA7-201ENST00000257879 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
ITGA7-201ENST00000257879 FMN1Q68DA7 1419 aa24.04■■□□□ 1.44
ITGA7-201ENST00000257879 SLC4A1APQ9BWU0 796 aaKnown RBP24.03■■□□□ 1.44
ITGA7-201ENST00000257879 HSPA5P11021 654 aaKnown RBP24.01■■□□□ 1.43
ITGA7-201ENST00000257879 IGF1RP08069 1367 aa23.98■■□□□ 1.43
ITGA7-201ENST00000257879 NBR1Q14596 966 aa23.97■■□□□ 1.43
ITGA7-201ENST00000257879 ZNF777Q9ULD5 760 aaPredicted RBP23.97■■□□□ 1.43
ITGA7-201ENST00000257879 NPM2Q86SE8 214 aaKnown RBP23.96■■□□□ 1.43
ITGA7-201ENST00000257879 LRRC9Q6ZRR7 1453 aa23.95■■□□□ 1.42
ITGA7-201ENST00000257879 FHOD3Q2V2M9 1422 aa23.93■■□□□ 1.42
ITGA7-201ENST00000257879 B4GALNT3Q6L9W6 998 aa23.93■■□□□ 1.42
ITGA7-201ENST00000257879 PHLDB1Q86UU1 1377 aa23.93■■□□□ 1.42
ITGA7-201ENST00000257879 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
ITGA7-201ENST00000257879 PEG3Q9GZU2 1588 aa23.9■■□□□ 1.42
ITGA7-201ENST00000257879 NOP58Q9Y2X3 529 aaKnown RBP23.89■■□□□ 1.41
ITGA7-201ENST00000257879 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
ITGA7-201ENST00000257879 FANCIQ9NVI1 1328 aa23.85■■□□□ 1.41
ITGA7-201ENST00000257879 CCDC18Q5T9S5 1454 aa23.84■■□□□ 1.41
ITGA7-201ENST00000257879 MPHOSPH9Q99550 1183 aa23.8■■□□□ 1.4
ITGA7-201ENST00000257879 UACAQ9BZF9 1416 aa23.79■■□□□ 1.4
ITGA7-201ENST00000257879 TIAM1Q13009 1591 aa23.78■■□□□ 1.4
ITGA7-201ENST00000257879 FGD6Q6ZV73 1430 aa23.77■■□□□ 1.4
ITGA7-201ENST00000257879 SALL2Q9Y467 1007 aaPredicted RBP23.77■■□□□ 1.4
ITGA7-201ENST00000257879 CUX1P39880 1505 aa23.76■■□□□ 1.39
ITGA7-201ENST00000257879 CFTRP13569 1480 aa23.76■■□□□ 1.39
ITGA7-201ENST00000257879 TSPY4P0CV99 314 aa23.75■■□□□ 1.39
ITGA7-201ENST00000257879 TSPY10P0CW01 314 aa23.75■■□□□ 1.39
ITGA7-201ENST00000257879 L3MBTL2Q969R5 705 aa23.75■■□□□ 1.39
ITGA7-201ENST00000257879 MAP3K1Q13233 1512 aa23.74■■□□□ 1.39
ITGA7-201ENST00000257879 FBLN2P98095 1184 aa23.74■■□□□ 1.39
ITGA7-201ENST00000257879 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
ITGA7-201ENST00000257879 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
ITGA7-201ENST00000257879 BICRAQ9NZM4 1560 aa23.72■■□□□ 1.39
ITGA7-201ENST00000257879 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
ITGA7-201ENST00000257879 DEKP35659 375 aaKnown RBP23.71■■□□□ 1.39
ITGA7-201ENST00000257879 PRKRIP1Q9H875 184 aaPredicted RBP23.71■■□□□ 1.39
ITGA7-201ENST00000257879 CFDP1Q9UEE9 299 aaPredicted RBP23.71■■□□□ 1.39
ITGA7-201ENST00000257879 CASKIN1Q8WXD9 1431 aa23.71■■□□□ 1.39
ITGA7-201ENST00000257879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.7■■□□□ 1.38
ITGA7-201ENST00000257879 ZBED9Q6R2W3 1325 aa23.69■■□□□ 1.38
ITGA7-201ENST00000257879 CARD11Q9BXL7 1154 aa23.69■■□□□ 1.38
ITGA7-201ENST00000257879 DDRGK1Q96HY6 314 aa23.67■■□□□ 1.38
ITGA7-201ENST00000257879 FYCO1Q9BQS8 1478 aa23.67■■□□□ 1.38
ITGA7-201ENST00000257879 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.66■■□□□ 1.38
ITGA7-201ENST00000257879 HMGXB3Q12766 1538 aa23.66■■□□□ 1.38
ITGA7-201ENST00000257879 NUDCQ9Y266 331 aa23.65■■□□□ 1.38
ITGA7-201ENST00000257879 BIVM-ERCC5R4GMW8 1640 aa23.64■■□□□ 1.38
ITGA7-201ENST00000257879 FOXD1Q16676 465 aa23.64■■□□□ 1.37
ITGA7-201ENST00000257879 PPM1GO15355 546 aaPredicted RBP23.63■■□□□ 1.37
ITGA7-201ENST00000257879 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
ITGA7-201ENST00000257879 TDRD9Q8NDG6 1382 aaKnown RBP23.61■■□□□ 1.37
ITGA7-201ENST00000257879 CANXP27824 592 aaKnown RBP23.59■■□□□ 1.37
ITGA7-201ENST00000257879 FANCD2Q9BXW9 1451 aa23.59■■□□□ 1.37
ITGA7-201ENST00000257879 HFM1A2PYH4 1435 aa23.57■■□□□ 1.36
ITGA7-201ENST00000257879 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
ITGA7-201ENST00000257879 CNTLNQ9NXG0 1405 aa23.57■■□□□ 1.36
ITGA7-201ENST00000257879 EFCAB5A4FU69 1503 aa23.57■■□□□ 1.36
ITGA7-201ENST00000257879 WASHC2AQ641Q2 1341 aa23.57■■□□□ 1.36
ITGA7-201ENST00000257879 WDR43Q15061 677 aaKnown RBP eCLIP23.56■■□□□ 1.36
ITGA7-201ENST00000257879 SENP3-EIF4A1A0A087X0R7 540 aa23.55■■□□□ 1.36
ITGA7-201ENST00000257879 PLEKHD1A6NEE1 506 aa23.55■■□□□ 1.36
ITGA7-201ENST00000257879 IPO9Q96P70 1041 aaKnown RBP23.54■■□□□ 1.36
ITGA7-201ENST00000257879 CCDC7Q96M83 1385 aa23.54■■□□□ 1.36
ITGA7-201ENST00000257879 MAPKBP1O60336 1514 aa23.53■■□□□ 1.36
ITGA7-201ENST00000257879 ROCK2O75116 1388 aaKnown RBP23.51■■□□□ 1.35
ITGA7-201ENST00000257879 TCERG1O14776 1098 aaKnown RBP23.5■■□□□ 1.35
ITGA7-201ENST00000257879 NCOA2Q15596 1464 aa23.5■■□□□ 1.35
ITGA7-201ENST00000257879 RALBP1Q15311 655 aa23.5■■□□□ 1.35
ITGA7-201ENST00000257879 PKD2Q13563 968 aa23.49■■□□□ 1.35
ITGA7-201ENST00000257879 NEFMP07197 916 aa23.48■■□□□ 1.35
ITGA7-201ENST00000257879 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
ITGA7-201ENST00000257879 RAD54L2Q9Y4B4 1467 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms