RNA–Protein interactions for RNA: ENST00000256996.8

DDB2-201, Transcript of damage specific DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-201ENST00000256996 TRIM26Q12899 539 aaPredicted RBP19.42■□□□□ 0.7
DDB2-201ENST00000256996 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
DDB2-201ENST00000256996 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
DDB2-201ENST00000256996 RANGAP1P46060 587 aaPredicted RBP19.38■□□□□ 0.69
DDB2-201ENST00000256996 SYNJ2O15056 1496 aa19.33■□□□□ 0.69
DDB2-201ENST00000256996 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
DDB2-201ENST00000256996 GRIN2AQ12879 1464 aa19.31■□□□□ 0.68
DDB2-201ENST00000256996 FBLN2P98095 1184 aa19.28■□□□□ 0.68
DDB2-201ENST00000256996 ZEB1P37275 1124 aaPredicted RBP19.27■□□□□ 0.68
DDB2-201ENST00000256996 ARHGAP35Q9NRY4 1499 aa19.27■□□□□ 0.68
DDB2-201ENST00000256996 CTTNBP2Q8WZ74 1663 aa19.25■□□□□ 0.67
DDB2-201ENST00000256996 ARAP1Q96P48 1450 aa19.23■□□□□ 0.67
DDB2-201ENST00000256996 VPS8Q8N3P4 1428 aa19.23■□□□□ 0.67
DDB2-201ENST00000256996 KIAA0586Q9BVV6 1533 aa19.21■□□□□ 0.67
DDB2-201ENST00000256996 NUP160Q12769 1436 aa19.19■□□□□ 0.66
DDB2-201ENST00000256996 OSCARQ8IYS5 282 aa19.19■□□□□ 0.66
DDB2-201ENST00000256996 IQGAP2Q13576 1575 aa19.18■□□□□ 0.66
DDB2-201ENST00000256996 EFCAB5A4FU69 1503 aa19.18■□□□□ 0.66
DDB2-201ENST00000256996 CEP170Q5SW79 1584 aa19.16■□□□□ 0.66
DDB2-201ENST00000256996 P3H3Q8IVL6 736 aa19.15■□□□□ 0.66
DDB2-201ENST00000256996 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
DDB2-201ENST00000256996 UGGT2Q9NYU1 1516 aa19.11■□□□□ 0.65
DDB2-201ENST00000256996 SAMD9Q5K651 1589 aa19.11■□□□□ 0.65
DDB2-201ENST00000256996 JPH4Q96JJ6 628 aa19.07■□□□□ 0.64
DDB2-201ENST00000256996 CHD1O14646 1710 aa19.06■□□□□ 0.64
DDB2-201ENST00000256996 FMN1Q68DA7 1419 aa19.04■□□□□ 0.64
DDB2-201ENST00000256996 DISP1Q96F81 1524 aa19.03■□□□□ 0.64
DDB2-201ENST00000256996 APLP2Q06481 763 aa19.03■□□□□ 0.64
DDB2-201ENST00000256996 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
DDB2-201ENST00000256996 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
DDB2-201ENST00000256996 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
DDB2-201ENST00000256996 CASKIN1Q8WXD9 1431 aa18.98■□□□□ 0.63
DDB2-201ENST00000256996 KIAA0556O60303 1618 aa18.98■□□□□ 0.63
DDB2-201ENST00000256996 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
DDB2-201ENST00000256996 FYCO1Q9BQS8 1478 aa18.96■□□□□ 0.63
DDB2-201ENST00000256996 PCF11O94913 1555 aaKnown RBP18.94■□□□□ 0.62
DDB2-201ENST00000256996 PRG4Q92954 1404 aaPredicted RBP18.93■□□□□ 0.62
DDB2-201ENST00000256996 ATP1B4Q9UN42 357 aaPredicted RBP18.92■□□□□ 0.62
DDB2-201ENST00000256996 CLASP1Q7Z460 1538 aa18.92■□□□□ 0.62
DDB2-201ENST00000256996 TTBK1Q5TCY1 1321 aaPredicted RBP18.91■□□□□ 0.62
DDB2-201ENST00000256996 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
DDB2-201ENST00000256996 MAP3K1Q13233 1512 aa18.91■□□□□ 0.62
DDB2-201ENST00000256996 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
DDB2-201ENST00000256996 SHROOM2Q13796 1616 aa18.89■□□□□ 0.61
DDB2-201ENST00000256996 ARHGEF11O15085 1522 aa18.88■□□□□ 0.61
DDB2-201ENST00000256996 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
DDB2-201ENST00000256996 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
DDB2-201ENST00000256996 AEBP2Q6ZN18 517 aaPredicted RBP18.86■□□□□ 0.61
DDB2-201ENST00000256996 LRRC9Q6ZRR7 1453 aa18.82■□□□□ 0.6
DDB2-201ENST00000256996 PTPRGP23470 1445 aa18.81■□□□□ 0.6
DDB2-201ENST00000256996 PLB1Q6P1J6 1458 aa18.8■□□□□ 0.6
DDB2-201ENST00000256996 HECW1Q76N89 1606 aa18.8■□□□□ 0.6
DDB2-201ENST00000256996 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
DDB2-201ENST00000256996 CCDC18Q5T9S5 1454 aa18.79■□□□□ 0.6
DDB2-201ENST00000256996 CFAP43Q8NDM7 1665 aa18.78■□□□□ 0.6
DDB2-201ENST00000256996 ERCC6L2Q5T890 1561 aa18.78■□□□□ 0.6
DDB2-201ENST00000256996 EPRSP07814 1512 aaKnown RBP18.78■□□□□ 0.6
DDB2-201ENST00000256996 NUP153P49790 1475 aaKnown RBP18.77■□□□□ 0.6
DDB2-201ENST00000256996 RAPGEF6Q8TEU7 1601 aa18.76■□□□□ 0.59
DDB2-201ENST00000256996 LRRIQ1Q96JM4 1722 aa18.74■□□□□ 0.59
DDB2-201ENST00000256996 ABCA8O94911 1581 aa18.73■□□□□ 0.59
DDB2-201ENST00000256996 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
DDB2-201ENST00000256996 MTUS2Q5JR59 1369 aa18.73■□□□□ 0.59
DDB2-201ENST00000256996 CDK13Q14004 1512 aaKnown RBP18.72■□□□□ 0.59
DDB2-201ENST00000256996 UACAQ9BZF9 1416 aa18.69■□□□□ 0.58
DDB2-201ENST00000256996 CDK11AQ9UQ88 783 aaPredicted RBP18.67■□□□□ 0.58
DDB2-201ENST00000256996 MAGI3Q5TCQ9 1506 aa18.66■□□□□ 0.58
DDB2-201ENST00000256996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
DDB2-201ENST00000256996 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
DDB2-201ENST00000256996 EHBP1L1Q8N3D4 1523 aa18.65■□□□□ 0.58
DDB2-201ENST00000256996 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
DDB2-201ENST00000256996 ATP10BO94823 1461 aa18.64■□□□□ 0.57
DDB2-201ENST00000256996 ACIN1Q9UKV3 1341 aaKnown RBP18.64■□□□□ 0.57
DDB2-201ENST00000256996 RRBP1Q9P2E9 1410 aaKnown RBP18.63■□□□□ 0.57
DDB2-201ENST00000256996 CENPBP07199 599 aaPredicted RBP18.62■□□□□ 0.57
DDB2-201ENST00000256996 ABCC2Q92887 1545 aa18.61■□□□□ 0.57
DDB2-201ENST00000256996 NCOA2Q15596 1464 aa18.6■□□□□ 0.57
DDB2-201ENST00000256996 UHRF1BP1LA0JNW5 1464 aa18.59■□□□□ 0.57
DDB2-201ENST00000256996 CCNB3Q8WWL7 1395 aa18.59■□□□□ 0.57
DDB2-201ENST00000256996 PLEKHD1A6NEE1 506 aa18.58■□□□□ 0.56
DDB2-201ENST00000256996 TROQ12816 1431 aaPredicted RBP18.58■□□□□ 0.56
DDB2-201ENST00000256996 SUPT6HQ7KZ85 1726 aaKnown RBP18.56■□□□□ 0.56
DDB2-201ENST00000256996 MYOM3Q5VTT5 1437 aa18.53■□□□□ 0.56
DDB2-201ENST00000256996 KDM5BQ9UGL1 1544 aa18.52■□□□□ 0.56
DDB2-201ENST00000256996 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
DDB2-201ENST00000256996 CCER1Q8TC90 406 aaPredicted RBP18.49■□□□□ 0.55
DDB2-201ENST00000256996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.48■□□□□ 0.55
DDB2-201ENST00000256996 ADCY10Q96PN6 1610 aa18.48■□□□□ 0.55
DDB2-201ENST00000256996 FAM50AQ14320 339 aaKnown RBP18.47■□□□□ 0.55
DDB2-201ENST00000256996 MIA2Q96PC5 1412 aa18.45■□□□□ 0.54
DDB2-201ENST00000256996 KIF14Q15058 1648 aa18.44■□□□□ 0.54
DDB2-201ENST00000256996 ZCCHC11Q5TAX3 1644 aaKnown RBP18.44■□□□□ 0.54
DDB2-201ENST00000256996 ABCC10Q5T3U5 1492 aa18.42■□□□□ 0.54
DDB2-201ENST00000256996 GPATCH8Q9UKJ3 1502 aaKnown RBP18.41■□□□□ 0.54
DDB2-201ENST00000256996 ITGAEP38570 1179 aa18.41■□□□□ 0.54
DDB2-201ENST00000256996 TCOF1Q13428 1488 aaKnown RBP18.39■□□□□ 0.53
DDB2-201ENST00000256996 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDB2-201ENST00000256996 CFDP1Q9UEE9 299 aaPredicted RBP18.38■□□□□ 0.53
DDB2-201ENST00000256996 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
DDB2-201ENST00000256996 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms