RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 PRXQ9BXM0 1461 aa16.52■□□□□ 0.24
VRTN-201ENST00000256362 RAB3GAP2Q9H2M9 1393 aa16.51■□□□□ 0.23
VRTN-201ENST00000256362 CUX1P39880 1505 aa16.49■□□□□ 0.23
VRTN-201ENST00000256362 CLSPNQ9HAW4 1339 aa16.48■□□□□ 0.23
VRTN-201ENST00000256362 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
VRTN-201ENST00000256362 NBR1Q14596 966 aa16.45■□□□□ 0.22
VRTN-201ENST00000256362 CUX2O14529 1486 aa16.44■□□□□ 0.22
VRTN-201ENST00000256362 CFTRP13569 1480 aa16.43■□□□□ 0.22
VRTN-201ENST00000256362 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
VRTN-201ENST00000256362 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
VRTN-201ENST00000256362 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
VRTN-201ENST00000256362 CDK11AQ9UQ88 783 aaPredicted RBP16.37■□□□□ 0.21
VRTN-201ENST00000256362 IGF1RP08069 1367 aa16.35■□□□□ 0.21
VRTN-201ENST00000256362 CARMIL1Q5VZK9 1371 aa16.35■□□□□ 0.21
VRTN-201ENST00000256362 PRDM2Q13029 1718 aa16.33■□□□□ 0.2
VRTN-201ENST00000256362 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
VRTN-201ENST00000256362 SENP3-EIF4A1A0A087X0R7 540 aa16.31■□□□□ 0.2
VRTN-201ENST00000256362 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
VRTN-201ENST00000256362 ANP32CO43423 234 aa16.31■□□□□ 0.2
VRTN-201ENST00000256362 WDR97A6NE52 1622 aa16.31■□□□□ 0.2
VRTN-201ENST00000256362 MAPKBP1O60336 1514 aa16.3■□□□□ 0.2
VRTN-201ENST00000256362 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
VRTN-201ENST00000256362 FHOD3Q2V2M9 1422 aa16.29■□□□□ 0.2
VRTN-201ENST00000256362 RTN4Q9NQC3 1192 aaKnown RBP16.29■□□□□ 0.2
VRTN-201ENST00000256362 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.19
VRTN-201ENST00000256362 MSH5O43196 834 aa16.26■□□□□ 0.19
VRTN-201ENST00000256362 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
VRTN-201ENST00000256362 CHIC2Q9UKJ5 165 aa16.25■□□□□ 0.19
VRTN-201ENST00000256362 LRRC9Q6ZRR7 1453 aa16.24■□□□□ 0.19
VRTN-201ENST00000256362 DEKP35659 375 aaKnown RBP16.24■□□□□ 0.19
VRTN-201ENST00000256362 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
VRTN-201ENST00000256362 TIAM1Q13009 1591 aa16.23■□□□□ 0.19
VRTN-201ENST00000256362 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
VRTN-201ENST00000256362 PPP1R15AO75807 674 aaPredicted RBP16.21■□□□□ 0.19
VRTN-201ENST00000256362 PRKCSHP14314 528 aaPredicted RBP16.21■□□□□ 0.19
VRTN-201ENST00000256362 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
VRTN-201ENST00000256362 RRP7BPQ9NSQ0 103 aa16.19■□□□□ 0.18
VRTN-201ENST00000256362 POLR3GLQ9BT43 218 aa16.18■□□□□ 0.18
VRTN-201ENST00000256362 CCDC136Q96JN2 1154 aa16.17■□□□□ 0.18
VRTN-201ENST00000256362 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
VRTN-201ENST00000256362 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
VRTN-201ENST00000256362 MTUS2Q5JR59 1369 aa16.15■□□□□ 0.18
VRTN-201ENST00000256362 PCF11O94913 1555 aaKnown RBP16.14■□□□□ 0.17
VRTN-201ENST00000256362 NPM2Q86SE8 214 aaKnown RBP16.14■□□□□ 0.17
VRTN-201ENST00000256362 FHAD1B1AJZ9 1412 aa16.13■□□□□ 0.17
VRTN-201ENST00000256362 ANO8Q9HCE9 1232 aaPredicted RBP16.13■□□□□ 0.17
VRTN-201ENST00000256362 FOXD1Q16676 465 aa16.12■□□□□ 0.17
VRTN-201ENST00000256362 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
VRTN-201ENST00000256362 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
VRTN-201ENST00000256362 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.1■□□□□ 0.17
VRTN-201ENST00000256362 TDRD9Q8NDG6 1382 aaKnown RBP16.08■□□□□ 0.16
VRTN-201ENST00000256362 NESP48681 1621 aa16.06■□□□□ 0.16
VRTN-201ENST00000256362 EIF5BO60841 1220 aaKnown RBP16.04■□□□□ 0.16
VRTN-201ENST00000256362 PTPRKQ15262 1439 aa16.04■□□□□ 0.16
VRTN-201ENST00000256362 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
VRTN-201ENST00000256362 CCER2I3L3R5 266 aa16.02■□□□□ 0.16
VRTN-201ENST00000256362 DNMBPQ6XZF7 1577 aa16.02■□□□□ 0.16
VRTN-201ENST00000256362 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.16
VRTN-201ENST00000256362 HSPA5P11021 654 aaKnown RBP16.02■□□□□ 0.15
VRTN-201ENST00000256362 CCDC184Q52MB2 194 aa16.02■□□□□ 0.15
VRTN-201ENST00000256362 TOPBP1Q92547 1522 aa16■□□□□ 0.15
VRTN-201ENST00000256362 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.15
VRTN-201ENST00000256362 POLA1P09884 1462 aaPredicted RBP15.98■□□□□ 0.15
VRTN-201ENST00000256362 ZNF326Q5BKZ1 582 aaKnown RBP15.98■□□□□ 0.15
VRTN-201ENST00000256362 TIMELESSQ9UNS1 1208 aa15.98■□□□□ 0.15
VRTN-201ENST00000256362 MAP3K1Q13233 1512 aa15.97■□□□□ 0.15
VRTN-201ENST00000256362 CASKIN1Q8WXD9 1431 aa15.96■□□□□ 0.15
VRTN-201ENST00000256362 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
VRTN-201ENST00000256362 NOP58Q9Y2X3 529 aaKnown RBP15.96■□□□□ 0.15
VRTN-201ENST00000256362 ABCA10Q8WWZ4 1543 aa15.96■□□□□ 0.15
VRTN-201ENST00000256362 SALL2Q9Y467 1007 aaPredicted RBP15.96■□□□□ 0.15
VRTN-201ENST00000256362 WASHC2AQ641Q2 1341 aa15.95■□□□□ 0.14
VRTN-201ENST00000256362 ANP32AP39687 249 aaKnown RBP15.95■□□□□ 0.14
VRTN-201ENST00000256362 LAS1LQ9Y4W2 734 aaKnown RBP15.95■□□□□ 0.14
VRTN-201ENST00000256362 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
VRTN-201ENST00000256362 PAK3O75914 559 aaPredicted RBP15.94■□□□□ 0.14
VRTN-201ENST00000256362 CFAP43Q8NDM7 1665 aa15.92■□□□□ 0.14
VRTN-201ENST00000256362 FMN1Q68DA7 1419 aa15.92■□□□□ 0.14
VRTN-201ENST00000256362 MRS2Q9HD23 443 aa15.92■□□□□ 0.14
VRTN-201ENST00000256362 C11orf95C9JLR9 678 aaPredicted RBP15.91■□□□□ 0.14
VRTN-201ENST00000256362 EIF4G2P78344 907 aaKnown RBP eCLIP15.91■□□□□ 0.14
VRTN-201ENST00000256362 L3MBTL2Q969R5 705 aa15.91■□□□□ 0.14
VRTN-201ENST00000256362 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
VRTN-201ENST00000256362 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
VRTN-201ENST00000256362 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
VRTN-201ENST00000256362 NAIPQ13075 1403 aa15.91■□□□□ 0.14
VRTN-201ENST00000256362 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
VRTN-201ENST00000256362 LAMC3Q9Y6N6 1575 aa15.9■□□□□ 0.14
VRTN-201ENST00000256362 IL27Q8NEV9 243 aa15.9■□□□□ 0.14
VRTN-201ENST00000256362 FANCIQ9NVI1 1328 aa15.88■□□□□ 0.13
VRTN-201ENST00000256362 PPP4R2Q9NY27 417 aa15.88■□□□□ 0.13
VRTN-201ENST00000256362 HFM1A2PYH4 1435 aa15.88■□□□□ 0.13
VRTN-201ENST00000256362 MPHOSPH9Q99550 1183 aa15.88■□□□□ 0.13
VRTN-201ENST00000256362 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
VRTN-201ENST00000256362 CUL7Q14999 1698 aa15.86■□□□□ 0.13
VRTN-201ENST00000256362 PTPN23Q9H3S7 1636 aa15.85■□□□□ 0.13
VRTN-201ENST00000256362 ZNF644Q9H582 1327 aaPredicted RBP15.85■□□□□ 0.13
VRTN-201ENST00000256362 ZNF777Q9ULD5 760 aaPredicted RBP15.84■□□□□ 0.13
VRTN-201ENST00000256362 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.13
VRTN-201ENST00000256362 CTTNBP2Q8WZ74 1663 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms