RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
PDE6A-201ENST00000255266 TNIKQ9UKE5 1360 aa12.9□□□□□ -0.34
PDE6A-201ENST00000255266 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
PDE6A-201ENST00000255266 KANK1Q14678 1352 aa12.87□□□□□ -0.35
PDE6A-201ENST00000255266 HDGFP51858 240 aaKnown RBP12.86□□□□□ -0.35
PDE6A-201ENST00000255266 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
PDE6A-201ENST00000255266 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
PDE6A-201ENST00000255266 CHIC2Q9UKJ5 165 aa12.85□□□□□ -0.35
PDE6A-201ENST00000255266 FMN1Q68DA7 1419 aa12.84□□□□□ -0.35
PDE6A-201ENST00000255266 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
PDE6A-201ENST00000255266 LAMC3Q9Y6N6 1575 aa12.82□□□□□ -0.36
PDE6A-201ENST00000255266 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
PDE6A-201ENST00000255266 C14orf37Q86TY3 774 aa12.81□□□□□ -0.36
PDE6A-201ENST00000255266 TONSLQ96HA7 1378 aa12.8□□□□□ -0.36
PDE6A-201ENST00000255266 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
PDE6A-201ENST00000255266 BICRAQ9NZM4 1560 aa12.79□□□□□ -0.36
PDE6A-201ENST00000255266 EFCAB2Q5VUJ9 269 aa12.79□□□□□ -0.36
PDE6A-201ENST00000255266 FGD5Q6ZNL6 1462 aa12.79□□□□□ -0.36
PDE6A-201ENST00000255266 GRIN2BQ13224 1484 aa12.77□□□□□ -0.37
PDE6A-201ENST00000255266 CFTRP13569 1480 aa12.77□□□□□ -0.37
PDE6A-201ENST00000255266 CNGB1Q14028 1251 aaPredicted RBP12.77□□□□□ -0.37
PDE6A-201ENST00000255266 PTPRGP23470 1445 aa12.75□□□□□ -0.37
PDE6A-201ENST00000255266 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
PDE6A-201ENST00000255266 AEBP2Q6ZN18 517 aaPredicted RBP12.73□□□□□ -0.37
PDE6A-201ENST00000255266 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
PDE6A-201ENST00000255266 RSPH4AQ5TD94 716 aa12.7□□□□□ -0.38
PDE6A-201ENST00000255266 CCDC18Q5T9S5 1454 aa12.69□□□□□ -0.38
PDE6A-201ENST00000255266 RRP7BPQ9NSQ0 103 aa12.69□□□□□ -0.38
PDE6A-201ENST00000255266 SCAF1Q9H7N4 1312 aaKnown RBP12.69□□□□□ -0.38
PDE6A-201ENST00000255266 ANP32CO43423 234 aa12.68□□□□□ -0.38
PDE6A-201ENST00000255266 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
PDE6A-201ENST00000255266 MLECQ14165 292 aa12.67□□□□□ -0.38
PDE6A-201ENST00000255266 ARHGAP35Q9NRY4 1499 aa12.67□□□□□ -0.38
PDE6A-201ENST00000255266 DNMBPQ6XZF7 1577 aa12.67□□□□□ -0.38
PDE6A-201ENST00000255266 NESP48681 1621 aa12.67□□□□□ -0.38
PDE6A-201ENST00000255266 UNC13AQ9UPW8 1703 aa12.66□□□□□ -0.38
PDE6A-201ENST00000255266 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
PDE6A-201ENST00000255266 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.39
PDE6A-201ENST00000255266 TOPBP1Q92547 1522 aa12.63□□□□□ -0.39
PDE6A-201ENST00000255266 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
PDE6A-201ENST00000255266 YTHDC1Q96MU7 727 aaKnown RBP12.62□□□□□ -0.39
PDE6A-201ENST00000255266 CDCA8Q53HL2 280 aa12.61□□□□□ -0.39
PDE6A-201ENST00000255266 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
PDE6A-201ENST00000255266 HRCP23327 699 aa12.6□□□□□ -0.39
PDE6A-201ENST00000255266 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
PDE6A-201ENST00000255266 ERICH6Q7L0X2 663 aa12.59□□□□□ -0.39
PDE6A-201ENST00000255266 FAM69CQ0P6D2 419 aa12.59□□□□□ -0.39
PDE6A-201ENST00000255266 ANKRD30AQ9BXX3 1397 aa12.58□□□□□ -0.4
PDE6A-201ENST00000255266 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
PDE6A-201ENST00000255266 VPS8Q8N3P4 1428 aa12.58□□□□□ -0.4
PDE6A-201ENST00000255266 GGT6Q6P531 493 aa12.57□□□□□ -0.4
PDE6A-201ENST00000255266 EID1Q9Y6B2 187 aa12.56□□□□□ -0.4
PDE6A-201ENST00000255266 POGKQ9P215 609 aa12.56□□□□□ -0.4
PDE6A-201ENST00000255266 SNAPC4Q5SXM2 1469 aa12.56□□□□□ -0.4
PDE6A-201ENST00000255266 FHOD3Q2V2M9 1422 aa12.55□□□□□ -0.4
PDE6A-201ENST00000255266 PEG3Q9GZU2 1588 aa12.55□□□□□ -0.4
PDE6A-201ENST00000255266 PRG4Q92954 1404 aaPredicted RBP12.53□□□□□ -0.4
PDE6A-201ENST00000255266 IGF1RP08069 1367 aa12.52□□□□□ -0.4
PDE6A-201ENST00000255266 CANXP27824 592 aaKnown RBP12.51□□□□□ -0.41
PDE6A-201ENST00000255266 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
PDE6A-201ENST00000255266 POLA1P09884 1462 aaPredicted RBP12.51□□□□□ -0.41
PDE6A-201ENST00000255266 SYNJ1O43426 1573 aa12.51□□□□□ -0.41
PDE6A-201ENST00000255266 SYNJ2O15056 1496 aa12.51□□□□□ -0.41
PDE6A-201ENST00000255266 MAGI1Q96QZ7 1491 aaPredicted RBP12.5□□□□□ -0.41
PDE6A-201ENST00000255266 DAXXQ9UER7 740 aaPredicted RBP12.5□□□□□ -0.41
PDE6A-201ENST00000255266 PRDM2Q13029 1718 aa12.49□□□□□ -0.41
PDE6A-201ENST00000255266 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
PDE6A-201ENST00000255266 TOP2BQ02880 1626 aa12.49□□□□□ -0.41
PDE6A-201ENST00000255266 RGL3Q3MIN7 710 aa12.49□□□□□ -0.41
PDE6A-201ENST00000255266 WASHC2CQ9Y4E1 1318 aa12.48□□□□□ -0.41
PDE6A-201ENST00000255266 KIF3BO15066 747 aa12.47□□□□□ -0.41
PDE6A-201ENST00000255266 A0A0G2JS52 829 aa12.45□□□□□ -0.42
PDE6A-201ENST00000255266 DIEXFQ68CQ4 756 aaKnown RBP12.45□□□□□ -0.42
PDE6A-201ENST00000255266 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
PDE6A-201ENST00000255266 TMC1Q8TDI8 760 aa12.44□□□□□ -0.42
PDE6A-201ENST00000255266 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDE6A-201ENST00000255266 CLSPNQ9HAW4 1339 aa12.43□□□□□ -0.42
PDE6A-201ENST00000255266 CUX1P39880 1505 aa12.43□□□□□ -0.42
PDE6A-201ENST00000255266 CUL7Q14999 1698 aa12.43□□□□□ -0.42
PDE6A-201ENST00000255266 ABCA10Q8WWZ4 1543 aa12.43□□□□□ -0.42
PDE6A-201ENST00000255266 EFCAB5A4FU69 1503 aa12.43□□□□□ -0.42
PDE6A-201ENST00000255266 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
PDE6A-201ENST00000255266 HNRNPMP52272 730 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDE6A-201ENST00000255266 CFAP53Q96M91 514 aa12.43□□□□□ -0.42
PDE6A-201ENST00000255266 WDR43Q15061 677 aaKnown RBP eCLIP12.42□□□□□ -0.42
PDE6A-201ENST00000255266 LMOD2Q6P5Q4 547 aa12.41□□□□□ -0.42
PDE6A-201ENST00000255266 POGZQ7Z3K3 1410 aa12.41□□□□□ -0.42
PDE6A-201ENST00000255266 SENP3Q9H4L4 574 aaPredicted RBP12.4□□□□□ -0.42
PDE6A-201ENST00000255266 UACAQ9BZF9 1416 aa12.4□□□□□ -0.43
PDE6A-201ENST00000255266 KIAA0586Q9BVV6 1533 aa12.39□□□□□ -0.43
PDE6A-201ENST00000255266 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
PDE6A-201ENST00000255266 PLEKHH2Q8IVE3 1493 aa12.39□□□□□ -0.43
PDE6A-201ENST00000255266 NUP155O75694 1391 aa12.38□□□□□ -0.43
PDE6A-201ENST00000255266 SETD5Q9C0A6 1442 aa12.37□□□□□ -0.43
PDE6A-201ENST00000255266 KIF21BO75037 1637 aa12.36□□□□□ -0.43
PDE6A-201ENST00000255266 EIF3AQ14152 1382 aaKnown RBP12.36□□□□□ -0.43
PDE6A-201ENST00000255266 ARHGAP5Q13017 1502 aa12.36□□□□□ -0.43
PDE6A-201ENST00000255266 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.35□□□□□ -0.43
PDE6A-201ENST00000255266 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
PDE6A-201ENST00000255266 KNSTRNQ9Y448 316 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms