RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 CHD1O14646 1710 aa17.89■□□□□ 0.45
CLUHP3-201ENST00000254109 TNIKQ9UKE5 1360 aa17.85■□□□□ 0.45
CLUHP3-201ENST00000254109 RANGAP1P46060 587 aaPredicted RBP17.83■□□□□ 0.44
CLUHP3-201ENST00000254109 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
CLUHP3-201ENST00000254109 CTTNBP2Q8WZ74 1663 aa17.8■□□□□ 0.44
CLUHP3-201ENST00000254109 CEP162Q5TB80 1403 aa17.78■□□□□ 0.44
CLUHP3-201ENST00000254109 NUP160Q12769 1436 aa17.77■□□□□ 0.44
CLUHP3-201ENST00000254109 KIAA0586Q9BVV6 1533 aa17.73■□□□□ 0.43
CLUHP3-201ENST00000254109 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
CLUHP3-201ENST00000254109 CLIP1P30622 1438 aa17.69■□□□□ 0.42
CLUHP3-201ENST00000254109 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
CLUHP3-201ENST00000254109 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
CLUHP3-201ENST00000254109 JPH4Q96JJ6 628 aa17.65■□□□□ 0.42
CLUHP3-201ENST00000254109 CLASP1Q7Z460 1538 aa17.65■□□□□ 0.42
CLUHP3-201ENST00000254109 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
CLUHP3-201ENST00000254109 PPARGC1BQ86YN6 1023 aaKnown RBP17.63■□□□□ 0.41
CLUHP3-201ENST00000254109 UGGT2Q9NYU1 1516 aa17.62■□□□□ 0.41
CLUHP3-201ENST00000254109 ZEB1P37275 1124 aaPredicted RBP17.59■□□□□ 0.41
CLUHP3-201ENST00000254109 SAMD9Q5K651 1589 aa17.59■□□□□ 0.41
CLUHP3-201ENST00000254109 DISP1Q96F81 1524 aa17.58■□□□□ 0.41
CLUHP3-201ENST00000254109 ARAP1Q96P48 1450 aa17.58■□□□□ 0.4
CLUHP3-201ENST00000254109 SHROOM2Q13796 1616 aa17.58■□□□□ 0.4
CLUHP3-201ENST00000254109 FHOD3Q2V2M9 1422 aa17.58■□□□□ 0.4
CLUHP3-201ENST00000254109 PRG4Q92954 1404 aaPredicted RBP17.57■□□□□ 0.4
CLUHP3-201ENST00000254109 EFCAB5A4FU69 1503 aa17.57■□□□□ 0.4
CLUHP3-201ENST00000254109 KIAA0556O60303 1618 aa17.55■□□□□ 0.4
CLUHP3-201ENST00000254109 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
CLUHP3-201ENST00000254109 ERCC6L2Q5T890 1561 aa17.54■□□□□ 0.4
CLUHP3-201ENST00000254109 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.39
CLUHP3-201ENST00000254109 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
CLUHP3-201ENST00000254109 FMN1Q68DA7 1419 aa17.42■□□□□ 0.38
CLUHP3-201ENST00000254109 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
CLUHP3-201ENST00000254109 PTPRGP23470 1445 aa17.41■□□□□ 0.38
CLUHP3-201ENST00000254109 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
CLUHP3-201ENST00000254109 APLP2Q06481 763 aa17.4■□□□□ 0.38
CLUHP3-201ENST00000254109 ARHGEF11O15085 1522 aa17.38■□□□□ 0.37
CLUHP3-201ENST00000254109 PLB1Q6P1J6 1458 aa17.38■□□□□ 0.37
CLUHP3-201ENST00000254109 CASKIN1Q8WXD9 1431 aa17.35■□□□□ 0.37
CLUHP3-201ENST00000254109 ARID3CA6NKF2 412 aa17.35■□□□□ 0.37
CLUHP3-201ENST00000254109 RIMBP3CA6NJZ7 1639 aa17.34■□□□□ 0.37
CLUHP3-201ENST00000254109 RIMBP3BA6NNM3 1639 aa17.34■□□□□ 0.37
CLUHP3-201ENST00000254109 RIMBP3Q9UFD9 1639 aa17.34■□□□□ 0.37
CLUHP3-201ENST00000254109 RAPGEF6Q8TEU7 1601 aa17.34■□□□□ 0.37
CLUHP3-201ENST00000254109 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
CLUHP3-201ENST00000254109 ABCA8O94911 1581 aa17.32■□□□□ 0.36
CLUHP3-201ENST00000254109 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
CLUHP3-201ENST00000254109 CCER1Q8TC90 406 aaPredicted RBP17.3■□□□□ 0.36
CLUHP3-201ENST00000254109 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
CLUHP3-201ENST00000254109 NUP153P49790 1475 aaKnown RBP17.29■□□□□ 0.36
CLUHP3-201ENST00000254109 HECW1Q76N89 1606 aa17.29■□□□□ 0.36
CLUHP3-201ENST00000254109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
CLUHP3-201ENST00000254109 CYB5RLQ6IPT4 315 aa17.26■□□□□ 0.35
CLUHP3-201ENST00000254109 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
CLUHP3-201ENST00000254109 EPRSP07814 1512 aaKnown RBP17.25■□□□□ 0.35
CLUHP3-201ENST00000254109 ABCC2Q92887 1545 aa17.24■□□□□ 0.35
CLUHP3-201ENST00000254109 KANK4Q5T7N3 995 aaPredicted RBP17.24■□□□□ 0.35
CLUHP3-201ENST00000254109 TIAM1Q13009 1591 aa17.24■□□□□ 0.35
CLUHP3-201ENST00000254109 ADCY10Q96PN6 1610 aa17.23■□□□□ 0.35
CLUHP3-201ENST00000254109 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
CLUHP3-201ENST00000254109 ATP10BO94823 1461 aa17.22■□□□□ 0.35
CLUHP3-201ENST00000254109 CFAP43Q8NDM7 1665 aa17.21■□□□□ 0.35
CLUHP3-201ENST00000254109 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
CLUHP3-201ENST00000254109 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.34
CLUHP3-201ENST00000254109 MAP3K1Q13233 1512 aa17.2■□□□□ 0.34
CLUHP3-201ENST00000254109 DNAJC5Q9H3Z4 198 aa17.18■□□□□ 0.34
CLUHP3-201ENST00000254109 MAGI3Q5TCQ9 1506 aa17.17■□□□□ 0.34
CLUHP3-201ENST00000254109 ZCCHC11Q5TAX3 1644 aaKnown RBP17.16■□□□□ 0.34
CLUHP3-201ENST00000254109 LRRC9Q6ZRR7 1453 aa17.16■□□□□ 0.34
CLUHP3-201ENST00000254109 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
CLUHP3-201ENST00000254109 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
CLUHP3-201ENST00000254109 PLEKHD1A6NEE1 506 aa17.1■□□□□ 0.33
CLUHP3-201ENST00000254109 CDK11AQ9UQ88 783 aaPredicted RBP17.1■□□□□ 0.33
CLUHP3-201ENST00000254109 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLUHP3-201ENST00000254109 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
CLUHP3-201ENST00000254109 TROQ12816 1431 aaPredicted RBP17.07■□□□□ 0.32
CLUHP3-201ENST00000254109 ASXL2Q76L83 1435 aa17.04■□□□□ 0.32
CLUHP3-201ENST00000254109 KCNH8Q96L42 1107 aa17.04■□□□□ 0.32
CLUHP3-201ENST00000254109 KIF14Q15058 1648 aa17.04■□□□□ 0.32
CLUHP3-201ENST00000254109 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
CLUHP3-201ENST00000254109 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
CLUHP3-201ENST00000254109 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
CLUHP3-201ENST00000254109 WDR7Q9Y4E6 1490 aa17.01■□□□□ 0.31
CLUHP3-201ENST00000254109 RRBP1Q9P2E9 1410 aaKnown RBP16.98■□□□□ 0.31
CLUHP3-201ENST00000254109 MAPKBP1O60336 1514 aa16.96■□□□□ 0.31
CLUHP3-201ENST00000254109 ABCC10Q5T3U5 1492 aa16.95■□□□□ 0.3
CLUHP3-201ENST00000254109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLUHP3-201ENST00000254109 CCNB3Q8WWL7 1395 aa16.94■□□□□ 0.3
CLUHP3-201ENST00000254109 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
CLUHP3-201ENST00000254109 MYOM3Q5VTT5 1437 aa16.91■□□□□ 0.3
CLUHP3-201ENST00000254109 GPATCH8Q9UKJ3 1502 aaKnown RBP16.91■□□□□ 0.3
CLUHP3-201ENST00000254109 CDC42BPAQ5VT25 1732 aa16.91■□□□□ 0.3
CLUHP3-201ENST00000254109 FGD6Q6ZV73 1430 aa16.88■□□□□ 0.29
CLUHP3-201ENST00000254109 ABCA9Q8IUA7 1624 aa16.87■□□□□ 0.29
CLUHP3-201ENST00000254109 CFDP1Q9UEE9 299 aaPredicted RBP16.86■□□□□ 0.29
CLUHP3-201ENST00000254109 CDC42BPBQ9Y5S2 1711 aa16.86■□□□□ 0.29
CLUHP3-201ENST00000254109 ITSN2Q9NZM3 1697 aa16.86■□□□□ 0.29
CLUHP3-201ENST00000254109 MYO5CQ9NQX4 1742 aa16.86■□□□□ 0.29
CLUHP3-201ENST00000254109 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
CLUHP3-201ENST00000254109 ZNF777Q9ULD5 760 aaPredicted RBP16.86■□□□□ 0.29
CLUHP3-201ENST00000254109 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms