RNA–Protein interactions for RNA: ENST00000252809.3

GDF15-201, Transcript of growth differentiation factor 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF15, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-201ENST00000252809 CTTNBP2Q8WZ74 1663 aa33.46■■■□□ 2.95
GDF15-201ENST00000252809 SHROOM2Q13796 1616 aa33.46■■■□□ 2.95
GDF15-201ENST00000252809 IQGAP2Q13576 1575 aa33.44■■■□□ 2.94
GDF15-201ENST00000252809 ARHGEF11O15085 1522 aa33.42■■■□□ 2.94
GDF15-201ENST00000252809 GOLGA3Q08378 1498 aa33.4■■■□□ 2.94
GDF15-201ENST00000252809 RIMBP3CA6NJZ7 1639 aa33.37■■■□□ 2.93
GDF15-201ENST00000252809 RIMBP3BA6NNM3 1639 aa33.37■■■□□ 2.93
GDF15-201ENST00000252809 RIMBP3Q9UFD9 1639 aa33.37■■■□□ 2.93
GDF15-201ENST00000252809 JPH4Q96JJ6 628 aa33.34■■■□□ 2.93
GDF15-201ENST00000252809 PRG4Q92954 1404 aaPredicted RBP33.28■■■□□ 2.92
GDF15-201ENST00000252809 UGGT2Q9NYU1 1516 aa33.26■■■□□ 2.91
GDF15-201ENST00000252809 CARMIL2Q6F5E8 1435 aa33.21■■■□□ 2.91
GDF15-201ENST00000252809 ERCC6L2Q5T890 1561 aa33.18■■■□□ 2.9
GDF15-201ENST00000252809 UBTFP17480 764 aaKnown RBP33.18■■■□□ 2.9
GDF15-201ENST00000252809 ARAP1Q96P48 1450 aa33.16■■■□□ 2.9
GDF15-201ENST00000252809 KIAA0556O60303 1618 aa33.11■■■□□ 2.89
GDF15-201ENST00000252809 EHMT2Q96KQ7 1210 aa33.11■■■□□ 2.89
GDF15-201ENST00000252809 DISP1Q96F81 1524 aa33.1■■■□□ 2.89
GDF15-201ENST00000252809 EFCAB5A4FU69 1503 aa33.02■■■□□ 2.88
GDF15-201ENST00000252809 SAMD9Q5K651 1589 aa33.02■■■□□ 2.88
GDF15-201ENST00000252809 TNIKQ9UKE5 1360 aa33.02■■■□□ 2.88
GDF15-201ENST00000252809 CYB5RLQ6IPT4 315 aa33■■■□□ 2.87
GDF15-201ENST00000252809 PTPRGP23470 1445 aa32.94■■■□□ 2.86
GDF15-201ENST00000252809 RANGAP1P46060 587 aaPredicted RBP32.88■■■□□ 2.85
GDF15-201ENST00000252809 ARHGAP35Q9NRY4 1499 aa32.8■■■□□ 2.84
GDF15-201ENST00000252809 TTBK1Q5TCY1 1321 aaPredicted RBP32.79■■■□□ 2.84
GDF15-201ENST00000252809 FHOD3Q2V2M9 1422 aa32.78■■■□□ 2.84
GDF15-201ENST00000252809 P3H3Q8IVL6 736 aa32.78■■■□□ 2.84
GDF15-201ENST00000252809 UACAQ9BZF9 1416 aa32.77■■■□□ 2.84
GDF15-201ENST00000252809 CLIP1P30622 1438 aa32.76■■■□□ 2.83
GDF15-201ENST00000252809 LOC105371045A0A1W2PR82 267 aa32.75■■■□□ 2.83
GDF15-201ENST00000252809 ADCY10Q96PN6 1610 aa32.74■■■□□ 2.83
GDF15-201ENST00000252809 UHRF1BP1LA0JNW5 1464 aa32.74■■■□□ 2.83
GDF15-201ENST00000252809 ABCC2Q92887 1545 aa32.73■■■□□ 2.83
GDF15-201ENST00000252809 CEP162Q5TB80 1403 aa32.71■■■□□ 2.83
GDF15-201ENST00000252809 ABCA8O94911 1581 aa32.7■■■□□ 2.82
GDF15-201ENST00000252809 FMN1Q68DA7 1419 aa32.68■■■□□ 2.82
GDF15-201ENST00000252809 PLB1Q6P1J6 1458 aa32.67■■■□□ 2.82
GDF15-201ENST00000252809 RAPGEF6Q8TEU7 1601 aa32.63■■■□□ 2.81
GDF15-201ENST00000252809 NPM1P06748 294 aaKnown RBP eCLIP32.62■■■□□ 2.81
GDF15-201ENST00000252809 KDM5BQ9UGL1 1544 aa32.56■■■□□ 2.8
GDF15-201ENST00000252809 MAPKBP1O60336 1514 aa32.52■■■□□ 2.8
GDF15-201ENST00000252809 ZCCHC11Q5TAX3 1644 aaKnown RBP32.5■■■□□ 2.79
GDF15-201ENST00000252809 HECW1Q76N89 1606 aa32.5■■■□□ 2.79
GDF15-201ENST00000252809 NUP153P49790 1475 aaKnown RBP32.47■■■□□ 2.79
GDF15-201ENST00000252809 PCF11O94913 1555 aaKnown RBP32.43■■■□□ 2.78
GDF15-201ENST00000252809 CASKIN1Q8WXD9 1431 aa32.42■■■□□ 2.78
GDF15-201ENST00000252809 FYCO1Q9BQS8 1478 aa32.42■■■□□ 2.78
GDF15-201ENST00000252809 ATP10BO94823 1461 aa32.37■■■□□ 2.77
GDF15-201ENST00000252809 ASXL2Q76L83 1435 aa32.36■■■□□ 2.77
GDF15-201ENST00000252809 CCDC18Q5T9S5 1454 aa32.33■■■□□ 2.77
GDF15-201ENST00000252809 ATP1B4Q9UN42 357 aaPredicted RBP32.32■■■□□ 2.76
GDF15-201ENST00000252809 VPS8Q8N3P4 1428 aa32.32■■■□□ 2.76
GDF15-201ENST00000252809 EPRSP07814 1512 aaKnown RBP32.31■■■□□ 2.76
GDF15-201ENST00000252809 WDR7Q9Y4E6 1490 aa32.31■■■□□ 2.76
GDF15-201ENST00000252809 ARID3CA6NKF2 412 aa32.29■■■□□ 2.76
GDF15-201ENST00000252809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.29■■■□□ 2.76
GDF15-201ENST00000252809 HNRNPUL2Q1KMD3 747 aaKnown RBP32.29■■■□□ 2.76
GDF15-201ENST00000252809 ABCC10Q5T3U5 1492 aa32.27■■■□□ 2.76
GDF15-201ENST00000252809 CDK13Q14004 1512 aaKnown RBP32.26■■■□□ 2.75
GDF15-201ENST00000252809 DIP2BQ9P265 1576 aa32.25■■■□□ 2.75
GDF15-201ENST00000252809 TRHP20396 242 aaPredicted RBP32.23■■■□□ 2.75
GDF15-201ENST00000252809 LRRIQ1Q96JM4 1722 aa32.21■■■□□ 2.75
GDF15-201ENST00000252809 CDK11AQ9UQ88 783 aaPredicted RBP32.2■■■□□ 2.75
GDF15-201ENST00000252809 KIF13AQ9H1H9 1805 aa32.17■■■□□ 2.74
GDF15-201ENST00000252809 GLI2P10070 1586 aa32.17■■■□□ 2.74
GDF15-201ENST00000252809 PLEKHD1A6NEE1 506 aa32.16■■■□□ 2.74
GDF15-201ENST00000252809 FAM69CQ0P6D2 419 aa32.12■■■□□ 2.73
GDF15-201ENST00000252809 CFAP43Q8NDM7 1665 aa32.08■■■□□ 2.73
GDF15-201ENST00000252809 TROQ12816 1431 aaPredicted RBP32.07■■■□□ 2.72
GDF15-201ENST00000252809 KCNH8Q96L42 1107 aa32.04■■■□□ 2.72
GDF15-201ENST00000252809 KIF14Q15058 1648 aa32.04■■■□□ 2.72
GDF15-201ENST00000252809 MAP3K4Q9Y6R4 1608 aa32.03■■■□□ 2.72
GDF15-201ENST00000252809 TIAM1Q13009 1591 aa32.02■■■□□ 2.72
GDF15-201ENST00000252809 MAP3K1Q13233 1512 aa32.02■■■□□ 2.72
GDF15-201ENST00000252809 ABCA9Q8IUA7 1624 aa32.01■■■□□ 2.72
GDF15-201ENST00000252809 EHBP1L1Q8N3D4 1523 aa31.98■■■□□ 2.71
GDF15-201ENST00000252809 MTUS2Q5JR59 1369 aa31.97■■■□□ 2.71
GDF15-201ENST00000252809 APLP2Q06481 763 aa31.97■■■□□ 2.71
GDF15-201ENST00000252809 MAGI3Q5TCQ9 1506 aa31.95■■■□□ 2.71
GDF15-201ENST00000252809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.93■■■□□ 2.76e-10■■□□□ 13
GDF15-201ENST00000252809 CD109Q6YHK3 1445 aa31.92■■■□□ 2.7
GDF15-201ENST00000252809 TEX14Q8IWB6 1497 aa31.91■■■□□ 2.7
GDF15-201ENST00000252809 TTC37Q6PGP7 1564 aa31.9■■■□□ 2.7
GDF15-201ENST00000252809 TSPOAP1O95153 1857 aa31.89■■■□□ 2.7
GDF15-201ENST00000252809 LRRC9Q6ZRR7 1453 aa31.85■■■□□ 2.69
GDF15-201ENST00000252809 PPRC1Q5VV67 1664 aaKnown RBP31.85■■■□□ 2.69
GDF15-201ENST00000252809 MYO5CQ9NQX4 1742 aa31.82■■■□□ 2.68
GDF15-201ENST00000252809 SUPT6HQ7KZ85 1726 aaKnown RBP31.81■■■□□ 2.68
GDF15-201ENST00000252809 ARAP3Q8WWN8 1544 aa31.8■■■□□ 2.68
GDF15-201ENST00000252809 CFAP74Q9C0B2 1584 aa31.78■■■□□ 2.68
GDF15-201ENST00000252809 PLCH2O75038 1416 aa31.75■■■□□ 2.67
GDF15-201ENST00000252809 NEO1Q92859 1461 aa31.73■■■□□ 2.67
GDF15-201ENST00000252809 PREX2Q70Z35 1606 aa31.73■■■□□ 2.67
GDF15-201ENST00000252809 PHLDB1Q86UU1 1377 aa31.72■■■□□ 2.67
GDF15-201ENST00000252809 NCOA2Q15596 1464 aa31.71■■■□□ 2.67
GDF15-201ENST00000252809 FANCAO15360 1455 aa31.7■■■□□ 2.66
GDF15-201ENST00000252809 ITSN2Q9NZM3 1697 aa31.7■■■□□ 2.66
GDF15-201ENST00000252809 CCNB3Q8WWL7 1395 aa31.69■■■□□ 2.66
GDF15-201ENST00000252809 ARHGAP5Q13017 1502 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms