RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 GOLGA3Q08378 1498 aa37.4■■■■□ 3.58
APOE-201ENST00000252486 CTTNBP2Q8WZ74 1663 aa37.38■■■■□ 3.57
APOE-201ENST00000252486 IQGAP2Q13576 1575 aa37.36■■■■□ 3.57
APOE-201ENST00000252486 SHROOM2Q13796 1616 aa37.35■■■■□ 3.57
APOE-201ENST00000252486 JPH4Q96JJ6 628 aa37.33■■■■□ 3.57
APOE-201ENST00000252486 UBTFP17480 764 aaKnown RBP37.24■■■■□ 3.55
APOE-201ENST00000252486 ARHGEF11O15085 1522 aa37.23■■■■□ 3.55
APOE-201ENST00000252486 PRG4Q92954 1404 aaPredicted RBP37.19■■■■□ 3.54
APOE-201ENST00000252486 EHMT2Q96KQ7 1210 aa37.18■■■■□ 3.54
APOE-201ENST00000252486 UGGT2Q9NYU1 1516 aa37.18■■■■□ 3.54
APOE-201ENST00000252486 RIMBP3CA6NJZ7 1639 aa37.18■■■■□ 3.54
APOE-201ENST00000252486 RIMBP3BA6NNM3 1639 aa37.18■■■■□ 3.54
APOE-201ENST00000252486 RIMBP3Q9UFD9 1639 aa37.18■■■■□ 3.54
APOE-201ENST00000252486 CARMIL2Q6F5E8 1435 aa37.12■■■■□ 3.53
APOE-201ENST00000252486 ERCC6L2Q5T890 1561 aa37.06■■■■□ 3.52
APOE-201ENST00000252486 TNIKQ9UKE5 1360 aa37.03■■■■□ 3.52
APOE-201ENST00000252486 DISP1Q96F81 1524 aa37.02■■■■□ 3.52
APOE-201ENST00000252486 KIAA0556O60303 1618 aa36.97■■■■□ 3.51
APOE-201ENST00000252486 ARAP1Q96P48 1450 aa36.96■■■■□ 3.51
APOE-201ENST00000252486 SAMD9Q5K651 1589 aa36.92■■■■□ 3.5
APOE-201ENST00000252486 EFCAB5A4FU69 1503 aa36.92■■■■□ 3.5
APOE-201ENST00000252486 LOC105371045A0A1W2PR82 267 aa36.9■■■■□ 3.5
APOE-201ENST00000252486 RANGAP1P46060 587 aaPredicted RBP36.87■■■■□ 3.49
APOE-201ENST00000252486 PTPRGP23470 1445 aa36.85■■■■□ 3.49
APOE-201ENST00000252486 CYB5RLQ6IPT4 315 aa36.84■■■■□ 3.49
APOE-201ENST00000252486 P3H3Q8IVL6 736 aa36.76■■■■□ 3.48
APOE-201ENST00000252486 ARHGAP35Q9NRY4 1499 aa36.74■■■■□ 3.47
APOE-201ENST00000252486 CLIP1P30622 1438 aa36.72■■■■□ 3.47
APOE-201ENST00000252486 TTBK1Q5TCY1 1321 aaPredicted RBP36.69■■■■□ 3.46
APOE-201ENST00000252486 FHOD3Q2V2M9 1422 aa36.68■■■■□ 3.46
APOE-201ENST00000252486 CEP162Q5TB80 1403 aa36.68■■■■□ 3.46
APOE-201ENST00000252486 UACAQ9BZF9 1416 aa36.62■■■■□ 3.45
APOE-201ENST00000252486 UHRF1BP1LA0JNW5 1464 aa36.57■■■■□ 3.45
APOE-201ENST00000252486 FMN1Q68DA7 1419 aa36.57■■■■□ 3.44
APOE-201ENST00000252486 ABCA8O94911 1581 aa36.54■■■■□ 3.44
APOE-201ENST00000252486 ABCC2Q92887 1545 aa36.54■■■■□ 3.44
APOE-201ENST00000252486 ADCY10Q96PN6 1610 aa36.53■■■■□ 3.44
APOE-201ENST00000252486 PLB1Q6P1J6 1458 aa36.52■■■■□ 3.44
APOE-201ENST00000252486 RAPGEF6Q8TEU7 1601 aa36.46■■■■□ 3.43
APOE-201ENST00000252486 NPM1P06748 294 aaKnown RBP eCLIP36.45■■■■□ 3.43
APOE-201ENST00000252486 KDM5BQ9UGL1 1544 aa36.37■■■■□ 3.41
APOE-201ENST00000252486 HECW1Q76N89 1606 aa36.31■■■■□ 3.4
APOE-201ENST00000252486 CASKIN1Q8WXD9 1431 aa36.31■■■■□ 3.4
APOE-201ENST00000252486 NUP153P49790 1475 aaKnown RBP36.31■■■■□ 3.4
APOE-201ENST00000252486 ZCCHC11Q5TAX3 1644 aaKnown RBP36.28■■■■□ 3.4
APOE-201ENST00000252486 FYCO1Q9BQS8 1478 aa36.27■■■■□ 3.4
APOE-201ENST00000252486 MAPKBP1O60336 1514 aa36.26■■■■□ 3.4
APOE-201ENST00000252486 PCF11O94913 1555 aaKnown RBP36.26■■■■□ 3.39
APOE-201ENST00000252486 VPS8Q8N3P4 1428 aa36.24■■■■□ 3.39
APOE-201ENST00000252486 ATP10BO94823 1461 aa36.24■■■■□ 3.39
APOE-201ENST00000252486 ATP1B4Q9UN42 357 aaPredicted RBP36.22■■■■□ 3.39
APOE-201ENST00000252486 EPRSP07814 1512 aaKnown RBP36.16■■■■□ 3.38
APOE-201ENST00000252486 ARID3CA6NKF2 412 aa36.15■■■■□ 3.38
APOE-201ENST00000252486 CCDC18Q5T9S5 1454 aa36.14■■■■□ 3.38
APOE-201ENST00000252486 ASXL2Q76L83 1435 aa36.14■■■■□ 3.38
APOE-201ENST00000252486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.13■■■■□ 3.37
APOE-201ENST00000252486 HNRNPUL2Q1KMD3 747 aaKnown RBP36.13■■■■□ 3.37
APOE-201ENST00000252486 CDK13Q14004 1512 aaKnown RBP36.08■■■■□ 3.37
APOE-201ENST00000252486 WDR7Q9Y4E6 1490 aa36.06■■■■□ 3.36
APOE-201ENST00000252486 CDK11AQ9UQ88 783 aaPredicted RBP36.06■■■■□ 3.36
APOE-201ENST00000252486 LRRIQ1Q96JM4 1722 aa36.05■■■■□ 3.36
APOE-201ENST00000252486 PLEKHD1A6NEE1 506 aa36.03■■■■□ 3.36
APOE-201ENST00000252486 ABCC10Q5T3U5 1492 aa35.99■■■■□ 3.35
APOE-201ENST00000252486 DIP2BQ9P265 1576 aa35.94■■■■□ 3.34
APOE-201ENST00000252486 TRHP20396 242 aaPredicted RBP35.93■■■■□ 3.34
APOE-201ENST00000252486 GLI2P10070 1586 aa35.89■■■■□ 3.34
APOE-201ENST00000252486 MAP3K1Q13233 1512 aa35.89■■■■□ 3.34
APOE-201ENST00000252486 FAM69CQ0P6D2 419 aa35.88■■■■□ 3.33
APOE-201ENST00000252486 TROQ12816 1431 aaPredicted RBP35.88■■■■□ 3.33
APOE-201ENST00000252486 CFAP43Q8NDM7 1665 aa35.88■■■■□ 3.33
APOE-201ENST00000252486 APLP2Q06481 763 aa35.87■■■■□ 3.33
APOE-201ENST00000252486 KCNH8Q96L42 1107 aa35.87■■■■□ 3.33
APOE-201ENST00000252486 TIAM1Q13009 1591 aa35.86■■■■□ 3.33
APOE-201ENST00000252486 KIF13AQ9H1H9 1805 aa35.86■■■■□ 3.33
APOE-201ENST00000252486 MTUS2Q5JR59 1369 aa35.8■■■■□ 3.32
APOE-201ENST00000252486 MAGI3Q5TCQ9 1506 aa35.78■■■■□ 3.32
APOE-201ENST00000252486 KIF14Q15058 1648 aa35.76■■■■□ 3.32
APOE-201ENST00000252486 EHBP1L1Q8N3D4 1523 aa35.75■■■■□ 3.31
APOE-201ENST00000252486 ABCA9Q8IUA7 1624 aa35.74■■■■□ 3.31
APOE-201ENST00000252486 MAP3K4Q9Y6R4 1608 aa35.72■■■■□ 3.31
APOE-201ENST00000252486 LRRC9Q6ZRR7 1453 aa35.69■■■■□ 3.3
APOE-201ENST00000252486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.68■■■■□ 3.36e-6■■■■□ 21.5
APOE-201ENST00000252486 CD109Q6YHK3 1445 aa35.67■■■■□ 3.3
APOE-201ENST00000252486 TTC37Q6PGP7 1564 aa35.62■■■■□ 3.29
APOE-201ENST00000252486 SUPT6HQ7KZ85 1726 aaKnown RBP35.59■■■■□ 3.29
APOE-201ENST00000252486 KANK4Q5T7N3 995 aaPredicted RBP35.58■■■■□ 3.29
APOE-201ENST00000252486 TEX14Q8IWB6 1497 aa35.58■■■■□ 3.29
APOE-201ENST00000252486 TSPOAP1O95153 1857 aa35.57■■■■□ 3.28
APOE-201ENST00000252486 MYO5CQ9NQX4 1742 aa35.53■■■■□ 3.28
APOE-201ENST00000252486 PPRC1Q5VV67 1664 aaKnown RBP35.52■■■■□ 3.28
APOE-201ENST00000252486 ARAP3Q8WWN8 1544 aa35.52■■■■□ 3.28
APOE-201ENST00000252486 PLCH2O75038 1416 aa35.51■■■■□ 3.28
APOE-201ENST00000252486 NCOA2Q15596 1464 aa35.5■■■■□ 3.27
APOE-201ENST00000252486 CCNB3Q8WWL7 1395 aa35.49■■■■□ 3.27
APOE-201ENST00000252486 CFAP74Q9C0B2 1584 aa35.45■■■■□ 3.27
APOE-201ENST00000252486 PREX2Q70Z35 1606 aa35.44■■■■□ 3.26
APOE-201ENST00000252486 PHLDB1Q86UU1 1377 aa35.44■■■■□ 3.26
APOE-201ENST00000252486 CDC42BPAQ5VT25 1732 aa35.43■■■■□ 3.26
APOE-201ENST00000252486 NEO1Q92859 1461 aa35.43■■■■□ 3.26
APOE-201ENST00000252486 GPATCH8Q9UKJ3 1502 aaKnown RBP35.42■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms