RNA–Protein interactions for RNA: ENST00000249373.7

SMO-201, Transcript of smoothened, frizzled class receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMO, Length 3,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-201ENST00000249373 CCNB3Q8WWL7 1395 aa23.6■■□□□ 1.37
SMO-201ENST00000249373 CARMIL1Q5VZK9 1371 aa23.59■■□□□ 1.37
SMO-201ENST00000249373 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.36
SMO-201ENST00000249373 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
SMO-201ENST00000249373 KDM2AQ9Y2K7 1162 aa23.56■■□□□ 1.36
SMO-201ENST00000249373 DHX57Q6P158 1386 aaKnown RBP23.52■■□□□ 1.36
SMO-201ENST00000249373 RAB3GAP2Q9H2M9 1393 aa23.49■■□□□ 1.35
SMO-201ENST00000249373 SLC4A1APQ9BWU0 796 aaKnown RBP23.48■■□□□ 1.35
SMO-201ENST00000249373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.46■■□□□ 1.353e-8■□□□□ 9.1
SMO-201ENST00000249373 DNAJC5BQ9UF47 199 aa23.45■■□□□ 1.35
SMO-201ENST00000249373 SYNJ1O43426 1573 aa23.45■■□□□ 1.34
SMO-201ENST00000249373 TSHZ2Q9NRE2 1034 aa23.43■■□□□ 1.34
SMO-201ENST00000249373 FHOD3Q2V2M9 1422 aa23.43■■□□□ 1.34
SMO-201ENST00000249373 CDK11AQ9UQ88 783 aaPredicted RBP23.36■■□□□ 1.33
SMO-201ENST00000249373 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
SMO-201ENST00000249373 CHMP7Q8WUX9 453 aaPredicted RBP23.33■■□□□ 1.32
SMO-201ENST00000249373 RGL3Q3MIN7 710 aa23.32■■□□□ 1.32
SMO-201ENST00000249373 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
SMO-201ENST00000249373 EIF4G1Q04637 1599 aaKnown RBP23.27■■□□□ 1.32
SMO-201ENST00000249373 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
SMO-201ENST00000249373 KIF21BO75037 1637 aa23.27■■□□□ 1.31
SMO-201ENST00000249373 ANP32EQ9BTT0 268 aa23.25■■□□□ 1.31
SMO-201ENST00000249373 RAD54L2Q9Y4B4 1467 aa23.25■■□□□ 1.31
SMO-201ENST00000249373 IGF1RP08069 1367 aa23.24■■□□□ 1.31
SMO-201ENST00000249373 SETD5Q9C0A6 1442 aa23.22■■□□□ 1.31
SMO-201ENST00000249373 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
SMO-201ENST00000249373 EIF4G2P78344 907 aaKnown RBP eCLIP23.2■■□□□ 1.31
SMO-201ENST00000249373 RBM19Q9Y4C8 960 aaKnown RBP23.18■■□□□ 1.3
SMO-201ENST00000249373 BCL11AQ9H165 835 aa23.17■■□□□ 1.3
SMO-201ENST00000249373 PHLDB1Q86UU1 1377 aa23.17■■□□□ 1.3
SMO-201ENST00000249373 NPM2Q86SE8 214 aaKnown RBP23.17■■□□□ 1.3
SMO-201ENST00000249373 NBR1Q14596 966 aa23.15■■□□□ 1.3
SMO-201ENST00000249373 CFDP1Q9UEE9 299 aaPredicted RBP23.15■■□□□ 1.3
SMO-201ENST00000249373 HSPA5P11021 654 aaKnown RBP23.13■■□□□ 1.29
SMO-201ENST00000249373 PPP1R15AO75807 674 aaPredicted RBP23.13■■□□□ 1.29
SMO-201ENST00000249373 B4GALNT3Q6L9W6 998 aa23.12■■□□□ 1.29
SMO-201ENST00000249373 BICRAQ9NZM4 1560 aa23.11■■□□□ 1.29
SMO-201ENST00000249373 NESP48681 1621 aa23.09■■□□□ 1.29
SMO-201ENST00000249373 CHGAP10645 457 aaKnown RBP23.08■■□□□ 1.28
SMO-201ENST00000249373 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
SMO-201ENST00000249373 TMC1Q8TDI8 760 aa23.06■■□□□ 1.28
SMO-201ENST00000249373 ZNF644Q9H582 1327 aaPredicted RBP23.06■■□□□ 1.28
SMO-201ENST00000249373 L3MBTL2Q969R5 705 aa23.04■■□□□ 1.28
SMO-201ENST00000249373 FHAD1B1AJZ9 1412 aa23.04■■□□□ 1.28
SMO-201ENST00000249373 TSPY4P0CV99 314 aa23.04■■□□□ 1.28
SMO-201ENST00000249373 TSPY10P0CW01 314 aa23.04■■□□□ 1.28
SMO-201ENST00000249373 ARHGAP35Q9NRY4 1499 aa23.03■■□□□ 1.28
SMO-201ENST00000249373 CUX1P39880 1505 aa23■■□□□ 1.27
SMO-201ENST00000249373 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
SMO-201ENST00000249373 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
SMO-201ENST00000249373 PLEKHD1A6NEE1 506 aa22.95■■□□□ 1.26
SMO-201ENST00000249373 CARD11Q9BXL7 1154 aa22.92■■□□□ 1.26
SMO-201ENST00000249373 CCDC136Q96JN2 1154 aa22.92■■□□□ 1.26
SMO-201ENST00000249373 DCAF11Q8TEB1 546 aa22.92■■□□□ 1.26
SMO-201ENST00000249373 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
SMO-201ENST00000249373 PKD2Q13563 968 aa22.91■■□□□ 1.26
SMO-201ENST00000249373 RTL5Q5HYW3 569 aaPredicted RBP22.9■■□□□ 1.26
SMO-201ENST00000249373 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
SMO-201ENST00000249373 NCAPD3P42695 1498 aa22.87■■□□□ 1.25
SMO-201ENST00000249373 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
SMO-201ENST00000249373 PDS5BQ9NTI5 1447 aa22.86■■□□□ 1.25
SMO-201ENST00000249373 CC2D1BQ5T0F9 858 aaKnown RBP22.85■■□□□ 1.25
SMO-201ENST00000249373 CCER2I3L3R5 266 aa22.85■■□□□ 1.25
SMO-201ENST00000249373 HNRNPMP52272 730 aaKnown RBP eCLIP22.84■■□□□ 1.256e-7■■■■□ 23.7
SMO-201ENST00000249373 CCDC184Q52MB2 194 aa22.82■■□□□ 1.24
SMO-201ENST00000249373 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
SMO-201ENST00000249373 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.242e-7■■■■□ 22.2
SMO-201ENST00000249373 RRBP1Q9P2E9 1410 aaKnown RBP22.81■■□□□ 1.24
SMO-201ENST00000249373 CFTRP13569 1480 aa22.8■■□□□ 1.24
SMO-201ENST00000249373 DAXXQ9UER7 740 aaPredicted RBP22.78■■□□□ 1.24
SMO-201ENST00000249373 LRRC9Q6ZRR7 1453 aa22.78■■□□□ 1.24
SMO-201ENST00000249373 TOP2BQ02880 1626 aa22.77■■□□□ 1.23
SMO-201ENST00000249373 ANP32AP39687 249 aaKnown RBP22.77■■□□□ 1.23
SMO-201ENST00000249373 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
SMO-201ENST00000249373 FMN1Q68DA7 1419 aa22.75■■□□□ 1.23
SMO-201ENST00000249373 TNNT2P45379 298 aaPredicted RBP22.75■■□□□ 1.23
SMO-201ENST00000249373 PPP4R2Q9NY27 417 aa22.72■■□□□ 1.23
SMO-201ENST00000249373 CCDC18Q5T9S5 1454 aa22.7■■□□□ 1.22
SMO-201ENST00000249373 TIMELESSQ9UNS1 1208 aa22.7■■□□□ 1.22
SMO-201ENST00000249373 NEUROD2Q15784 382 aa22.69■■□□□ 1.22
SMO-201ENST00000249373 FGD6Q6ZV73 1430 aa22.66■■□□□ 1.22
SMO-201ENST00000249373 NUP155O75694 1391 aa22.66■■□□□ 1.22
SMO-201ENST00000249373 WASHC2AQ641Q2 1341 aa22.65■■□□□ 1.22
SMO-201ENST00000249373 CANXP27824 592 aaKnown RBP22.65■■□□□ 1.22
SMO-201ENST00000249373 JPH4Q96JJ6 628 aa22.65■■□□□ 1.22
SMO-201ENST00000249373 GAPVD1Q14C86 1478 aa22.63■■□□□ 1.21
SMO-201ENST00000249373 NBPF8Q3BBV2 869 aa22.62■■□□□ 1.21
SMO-201ENST00000249373 ZBTB47Q9UFB7 747 aaPredicted RBP22.62■■□□□ 1.21
SMO-201ENST00000249373 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
SMO-201ENST00000249373 C11orf95C9JLR9 678 aaPredicted RBP22.61■■□□□ 1.21
SMO-201ENST00000249373 ERICH3Q5RHP9 1530 aa22.6■■□□□ 1.21
SMO-201ENST00000249373 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
SMO-201ENST00000249373 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
SMO-201ENST00000249373 PRKRIP1Q9H875 184 aaPredicted RBP22.58■■□□□ 1.21
SMO-201ENST00000249373 RTN4Q9NQC3 1192 aaKnown RBP22.58■■□□□ 1.21
SMO-201ENST00000249373 SAFB2Q14151 953 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMO-201ENST00000249373 NUTM2DQ5VT03 806 aaPredicted RBP22.55■■□□□ 1.2
SMO-201ENST00000249373 MSH5O43196 834 aa22.53■■□□□ 1.2
SMO-201ENST00000249373 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
SMO-201ENST00000249373 NCOA2Q15596 1464 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms