RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 TOP2AP11388 1531 aaKnown RBP25.43■■□□□ 1.66
PTPN12-201ENST00000248594 CNGB1Q14028 1251 aaPredicted RBP25.41■■□□□ 1.66
PTPN12-201ENST00000248594 CLIP1P30622 1438 aa25.39■■□□□ 1.66
PTPN12-201ENST00000248594 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
PTPN12-201ENST00000248594 NPM2Q86SE8 214 aaKnown RBP25.35■■□□□ 1.65
PTPN12-201ENST00000248594 SENP3-EIF4A1A0A087X0R7 540 aa25.34■■□□□ 1.65
PTPN12-201ENST00000248594 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
PTPN12-201ENST00000248594 KANK4Q5T7N3 995 aaPredicted RBP25.31■■□□□ 1.64
PTPN12-201ENST00000248594 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
PTPN12-201ENST00000248594 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
PTPN12-201ENST00000248594 LAS1LQ9Y4W2 734 aaKnown RBP25.26■■□□□ 1.63
PTPN12-201ENST00000248594 HMGXB3Q12766 1538 aa25.25■■□□□ 1.63
PTPN12-201ENST00000248594 ZBTB47Q9UFB7 747 aaPredicted RBP25.25■■□□□ 1.63
PTPN12-201ENST00000248594 ANP32AP39687 249 aaKnown RBP25.24■■□□□ 1.63
PTPN12-201ENST00000248594 PPP4R2Q9NY27 417 aa25.23■■□□□ 1.63
PTPN12-201ENST00000248594 FAM9BQ8IZU0 186 aa25.2■■□□□ 1.62
PTPN12-201ENST00000248594 PPP1R15AO75807 674 aaPredicted RBP25.18■■□□□ 1.62
PTPN12-201ENST00000248594 P3H3Q8IVL6 736 aa25.18■■□□□ 1.62
PTPN12-201ENST00000248594 ERICH6BQ5W0A0 696 aa25.16■■□□□ 1.62
PTPN12-201ENST00000248594 VPS8Q8N3P4 1428 aa25.15■■□□□ 1.62
PTPN12-201ENST00000248594 CCER2I3L3R5 266 aa25.14■■□□□ 1.61
PTPN12-201ENST00000248594 FAM50AQ14320 339 aaKnown RBP25.12■■□□□ 1.61
PTPN12-201ENST00000248594 NEFMP07197 916 aa25.08■■□□□ 1.61
PTPN12-201ENST00000248594 RAPGEF2Q9Y4G8 1499 aa25.06■■□□□ 1.6
PTPN12-201ENST00000248594 UBE2Q2Q8WVN8 375 aa25.03■■□□□ 1.6
PTPN12-201ENST00000248594 BRPF3Q9ULD4 1205 aa25.02■■□□□ 1.6
PTPN12-201ENST00000248594 TIMELESSQ9UNS1 1208 aa25.02■■□□□ 1.6
PTPN12-201ENST00000248594 IPO9Q96P70 1041 aaKnown RBP25.02■■□□□ 1.6
PTPN12-201ENST00000248594 RAB3GAP2Q9H2M9 1393 aa24.99■■□□□ 1.59
PTPN12-201ENST00000248594 EEA1Q15075 1411 aa24.95■■□□□ 1.58
PTPN12-201ENST00000248594 CCDC184Q52MB2 194 aa24.94■■□□□ 1.58
PTPN12-201ENST00000248594 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
PTPN12-201ENST00000248594 DNAJC5BQ9UF47 199 aa24.93■■□□□ 1.58
PTPN12-201ENST00000248594 SLC24A1O60721 1099 aa24.91■■□□□ 1.58
PTPN12-201ENST00000248594 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
PTPN12-201ENST00000248594 CCNB3Q8WWL7 1395 aa24.87■■□□□ 1.57
PTPN12-201ENST00000248594 MRS2Q9HD23 443 aa24.87■■□□□ 1.57
PTPN12-201ENST00000248594 POLR3GLQ9BT43 218 aa24.86■■□□□ 1.57
PTPN12-201ENST00000248594 SYNJ1O43426 1573 aa24.79■■□□□ 1.56
PTPN12-201ENST00000248594 TONSLQ96HA7 1378 aa24.78■■□□□ 1.56
PTPN12-201ENST00000248594 KIF21BO75037 1637 aa24.73■■□□□ 1.55
PTPN12-201ENST00000248594 PKNOX2Q96KN3 472 aa24.73■■□□□ 1.55
PTPN12-201ENST00000248594 SLC4A3P48751 1232 aa24.71■■□□□ 1.55
PTPN12-201ENST00000248594 ARID3CA6NKF2 412 aa24.71■■□□□ 1.55
PTPN12-201ENST00000248594 CFTRP13569 1480 aa24.68■■□□□ 1.54
PTPN12-201ENST00000248594 ARXQ96QS3 562 aa24.68■■□□□ 1.54
PTPN12-201ENST00000248594 PLEKHG5O94827 1062 aa24.66■■□□□ 1.54
PTPN12-201ENST00000248594 MAPKBP1O60336 1514 aa24.64■■□□□ 1.54
PTPN12-201ENST00000248594 DAXXQ9UER7 740 aaPredicted RBP24.64■■□□□ 1.54
PTPN12-201ENST00000248594 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.53
PTPN12-201ENST00000248594 SETD5Q9C0A6 1442 aa24.63■■□□□ 1.53
PTPN12-201ENST00000248594 AKNAQ7Z591 1439 aa24.63■■□□□ 1.53
PTPN12-201ENST00000248594 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
PTPN12-201ENST00000248594 HSPA5P11021 654 aaKnown RBP24.58■■□□□ 1.53
PTPN12-201ENST00000248594 SKAP1Q86WV1 359 aa24.58■■□□□ 1.52
PTPN12-201ENST00000248594 GSE1Q14687 1217 aa24.57■■□□□ 1.52
PTPN12-201ENST00000248594 WASHC2AQ641Q2 1341 aa24.57■■□□□ 1.52
PTPN12-201ENST00000248594 VSIG10Q8N0Z9 540 aa24.56■■□□□ 1.52
PTPN12-201ENST00000248594 FRAT1Q92837 279 aaPredicted RBP24.56■■□□□ 1.52
PTPN12-201ENST00000248594 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
PTPN12-201ENST00000248594 RRBP1Q9P2E9 1410 aaKnown RBP24.54■■□□□ 1.52
PTPN12-201ENST00000248594 PPM1GO15355 546 aaPredicted RBP24.54■■□□□ 1.52
PTPN12-201ENST00000248594 NESP48681 1621 aa24.53■■□□□ 1.52
PTPN12-201ENST00000248594 LAMC3Q9Y6N6 1575 aa24.5■■□□□ 1.51
PTPN12-201ENST00000248594 PDE4AP27815 886 aa24.5■■□□□ 1.51
PTPN12-201ENST00000248594 CHIC2Q9UKJ5 165 aa24.49■■□□□ 1.51
PTPN12-201ENST00000248594 ZBED9Q6R2W3 1325 aa24.47■■□□□ 1.51
PTPN12-201ENST00000248594 PRKRIP1Q9H875 184 aaPredicted RBP24.46■■□□□ 1.51
PTPN12-201ENST00000248594 NFKBIBQ15653 356 aa24.45■■□□□ 1.5
PTPN12-201ENST00000248594 USP35Q9P2H5 1018 aa24.44■■□□□ 1.5
PTPN12-201ENST00000248594 EXOC6Q8TAG9 804 aa24.42■■□□□ 1.5
PTPN12-201ENST00000248594 ARID4BQ4LE39 1312 aaPredicted RBP24.42■■□□□ 1.5
PTPN12-201ENST00000248594 EIF4G2P78344 907 aaKnown RBP eCLIP24.41■■□□□ 1.5
PTPN12-201ENST00000248594 WASHC2CQ9Y4E1 1318 aa24.39■■□□□ 1.5
PTPN12-201ENST00000248594 C11orf95C9JLR9 678 aaPredicted RBP24.38■■□□□ 1.49
PTPN12-201ENST00000248594 NUDCQ9Y266 331 aa24.38■■□□□ 1.49
PTPN12-201ENST00000248594 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
PTPN12-201ENST00000248594 GLIPR1L2Q4G1C9 344 aa24.37■■□□□ 1.49
PTPN12-201ENST00000248594 FOXD1Q16676 465 aa24.36■■□□□ 1.49
PTPN12-201ENST00000248594 RSPH6AQ9H0K4 717 aa24.35■■□□□ 1.49
PTPN12-201ENST00000248594 NAP1L5Q96NT1 182 aaPredicted RBP24.35■■□□□ 1.49
PTPN12-201ENST00000248594 RRP7BPQ9NSQ0 103 aa24.33■■□□□ 1.49
PTPN12-201ENST00000248594 ZMYND15Q9H091 742 aa24.33■■□□□ 1.49
PTPN12-201ENST00000248594 ZNF326Q5BKZ1 582 aaKnown RBP24.31■■□□□ 1.48
PTPN12-201ENST00000248594 PODXL2Q9NZ53 605 aa24.31■■□□□ 1.48
PTPN12-201ENST00000248594 FRAT2O75474 233 aaPredicted RBP24.31■■□□□ 1.48
PTPN12-201ENST00000248594 PHLDB1Q86UU1 1377 aa24.31■■□□□ 1.48
PTPN12-201ENST00000248594 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
PTPN12-201ENST00000248594 CUX2O14529 1486 aa24.29■■□□□ 1.48
PTPN12-201ENST00000248594 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
PTPN12-201ENST00000248594 TCERG1O14776 1098 aaKnown RBP24.28■■□□□ 1.48
PTPN12-201ENST00000248594 DCAF11Q8TEB1 546 aa24.27■■□□□ 1.48
PTPN12-201ENST00000248594 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
PTPN12-201ENST00000248594 BACH2Q9BYV9 841 aa24.27■■□□□ 1.48
PTPN12-201ENST00000248594 BIVM-ERCC5R4GMW8 1640 aa24.27■■□□□ 1.48
PTPN12-201ENST00000248594 CUX1P39880 1505 aa24.26■■□□□ 1.47
PTPN12-201ENST00000248594 PLIN1O60240 522 aa24.25■■□□□ 1.47
PTPN12-201ENST00000248594 TMC1Q8TDI8 760 aa24.23■■□□□ 1.47
PTPN12-201ENST00000248594 ARHGAP35Q9NRY4 1499 aa24.22■■□□□ 1.47
PTPN12-201ENST00000248594 DDRGK1Q96HY6 314 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms