RNA–Protein interactions for RNA: ENST00000243914.7

CTCFL-201, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-201ENST00000243914 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
CTCFL-201ENST00000243914 ZNF608Q9ULD9 1512 aaPredicted RBP16.58■□□□□ 0.24
CTCFL-201ENST00000243914 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
CTCFL-201ENST00000243914 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.24
CTCFL-201ENST00000243914 TARBP1Q13395 1621 aaKnown RBP16.47■□□□□ 0.23
CTCFL-201ENST00000243914 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
CTCFL-201ENST00000243914 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
CTCFL-201ENST00000243914 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
CTCFL-201ENST00000243914 PHLDB1Q86UU1 1377 aa16.42■□□□□ 0.22
CTCFL-201ENST00000243914 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
CTCFL-201ENST00000243914 CUL7Q14999 1698 aa16.41■□□□□ 0.22
CTCFL-201ENST00000243914 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
CTCFL-201ENST00000243914 FHAD1B1AJZ9 1412 aa16.37■□□□□ 0.21
CTCFL-201ENST00000243914 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
CTCFL-201ENST00000243914 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
CTCFL-201ENST00000243914 LRRC9Q6ZRR7 1453 aa16.36■□□□□ 0.21
CTCFL-201ENST00000243914 CTTNBP2Q8WZ74 1663 aa16.35■□□□□ 0.21
CTCFL-201ENST00000243914 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
CTCFL-201ENST00000243914 PBRM1Q86U86 1689 aa16.34■□□□□ 0.21
CTCFL-201ENST00000243914 MTUS2Q5JR59 1369 aa16.33■□□□□ 0.21
CTCFL-201ENST00000243914 IFT140Q96RY7 1462 aa16.33■□□□□ 0.2
CTCFL-201ENST00000243914 WDR62O43379 1518 aa16.31■□□□□ 0.2
CTCFL-201ENST00000243914 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
CTCFL-201ENST00000243914 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
CTCFL-201ENST00000243914 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
CTCFL-201ENST00000243914 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
CTCFL-201ENST00000243914 EIF4G3O43432 1585 aaKnown RBP16.28■□□□□ 0.2
CTCFL-201ENST00000243914 ADAMTS12P58397 1594 aa16.27■□□□□ 0.19
CTCFL-201ENST00000243914 NEUROD1Q13562 356 aa16.26■□□□□ 0.19
CTCFL-201ENST00000243914 EFCAB5A4FU69 1503 aa16.25■□□□□ 0.19
CTCFL-201ENST00000243914 DHX57Q6P158 1386 aaKnown RBP16.24■□□□□ 0.19
CTCFL-201ENST00000243914 THOC2Q8NI27 1593 aaKnown RBP16.24■□□□□ 0.19
CTCFL-201ENST00000243914 RAB3GAP2Q9H2M9 1393 aa16.24■□□□□ 0.19
CTCFL-201ENST00000243914 FYCO1Q9BQS8 1478 aa16.24■□□□□ 0.19
CTCFL-201ENST00000243914 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
CTCFL-201ENST00000243914 IQGAP2Q13576 1575 aa16.22■□□□□ 0.19
CTCFL-201ENST00000243914 CDK13Q14004 1512 aaKnown RBP16.22■□□□□ 0.19
CTCFL-201ENST00000243914 SIN3AQ96ST3 1273 aa16.21■□□□□ 0.19
CTCFL-201ENST00000243914 RRP7BPQ9NSQ0 103 aa16.2■□□□□ 0.18
CTCFL-201ENST00000243914 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
CTCFL-201ENST00000243914 JPH4Q96JJ6 628 aa16.19■□□□□ 0.18
CTCFL-201ENST00000243914 SAMD9Q5K651 1589 aa16.19■□□□□ 0.18
CTCFL-201ENST00000243914 LRRIQ1Q96JM4 1722 aa16.19■□□□□ 0.18
CTCFL-201ENST00000243914 ZNF777Q9ULD5 760 aaPredicted RBP16.16■□□□□ 0.18
CTCFL-201ENST00000243914 CFAP43Q8NDM7 1665 aa16.15■□□□□ 0.18
CTCFL-201ENST00000243914 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
CTCFL-201ENST00000243914 MAGI3Q5TCQ9 1506 aa16.15■□□□□ 0.18
CTCFL-201ENST00000243914 ZNF644Q9H582 1327 aaPredicted RBP16.14■□□□□ 0.17
CTCFL-201ENST00000243914 NCOA2Q15596 1464 aa16.14■□□□□ 0.17
CTCFL-201ENST00000243914 FGD6Q6ZV73 1430 aa16.12■□□□□ 0.17
CTCFL-201ENST00000243914 MAP3K1Q13233 1512 aa16.12■□□□□ 0.17
CTCFL-201ENST00000243914 KIAA0586Q9BVV6 1533 aa16.12■□□□□ 0.17
CTCFL-201ENST00000243914 PTPRKQ15262 1439 aa16.11■□□□□ 0.17
CTCFL-201ENST00000243914 DISP1Q96F81 1524 aa16.11■□□□□ 0.17
CTCFL-201ENST00000243914 SETD5Q9C0A6 1442 aa16.11■□□□□ 0.17
CTCFL-201ENST00000243914 CEP170Q5SW79 1584 aa16.11■□□□□ 0.17
CTCFL-201ENST00000243914 PLB1Q6P1J6 1458 aa16.11■□□□□ 0.17
CTCFL-201ENST00000243914 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
CTCFL-201ENST00000243914 EPRSP07814 1512 aaKnown RBP16.1■□□□□ 0.17
CTCFL-201ENST00000243914 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
CTCFL-201ENST00000243914 YTHDC1Q96MU7 727 aaKnown RBP16.09■□□□□ 0.17
CTCFL-201ENST00000243914 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
CTCFL-201ENST00000243914 MAGI1Q96QZ7 1491 aaPredicted RBP16.06■□□□□ 0.16
CTCFL-201ENST00000243914 PRG4Q92954 1404 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-201ENST00000243914 FOXD1Q16676 465 aa16.05■□□□□ 0.16
CTCFL-201ENST00000243914 MYOM3Q5VTT5 1437 aa16.04■□□□□ 0.16
CTCFL-201ENST00000243914 KIAA0556O60303 1618 aa16.04■□□□□ 0.16
CTCFL-201ENST00000243914 UGGT2Q9NYU1 1516 aa16.03■□□□□ 0.16
CTCFL-201ENST00000243914 NUP153P49790 1475 aaKnown RBP16.02■□□□□ 0.15
CTCFL-201ENST00000243914 HECW1Q76N89 1606 aa16.01■□□□□ 0.15
CTCFL-201ENST00000243914 MIER1Q8N108 512 aa16■□□□□ 0.15
CTCFL-201ENST00000243914 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
CTCFL-201ENST00000243914 EHBP1L1Q8N3D4 1523 aa15.98■□□□□ 0.15
CTCFL-201ENST00000243914 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
CTCFL-201ENST00000243914 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
CTCFL-201ENST00000243914 CFDP1Q9UEE9 299 aaPredicted RBP15.97■□□□□ 0.15
CTCFL-201ENST00000243914 MAPKBP1O60336 1514 aa15.97■□□□□ 0.15
CTCFL-201ENST00000243914 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
CTCFL-201ENST00000243914 CARMIL2Q6F5E8 1435 aa15.97■□□□□ 0.15
CTCFL-201ENST00000243914 NUP160Q12769 1436 aa15.95■□□□□ 0.14
CTCFL-201ENST00000243914 PTPN23Q9H3S7 1636 aa15.94■□□□□ 0.14
CTCFL-201ENST00000243914 PLEKHD1A6NEE1 506 aa15.94■□□□□ 0.14
CTCFL-201ENST00000243914 RAPGEF6Q8TEU7 1601 aa15.93■□□□□ 0.14
CTCFL-201ENST00000243914 PTPRGP23470 1445 aa15.91■□□□□ 0.14
CTCFL-201ENST00000243914 NAIPQ13075 1403 aa15.91■□□□□ 0.14
CTCFL-201ENST00000243914 CLSPNQ9HAW4 1339 aa15.9■□□□□ 0.14
CTCFL-201ENST00000243914 ERCC6L2Q5T890 1561 aa15.89■□□□□ 0.13
CTCFL-201ENST00000243914 CHD1O14646 1710 aa15.89■□□□□ 0.13
CTCFL-201ENST00000243914 HNRNPMP52272 730 aaKnown RBP eCLIP15.88■□□□□ 0.13
CTCFL-201ENST00000243914 KDM6BO15054 1643 aa15.87■□□□□ 0.13
CTCFL-201ENST00000243914 KIF14Q15058 1648 aa15.87■□□□□ 0.13
CTCFL-201ENST00000243914 HFM1A2PYH4 1435 aa15.86■□□□□ 0.13
CTCFL-201ENST00000243914 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
CTCFL-201ENST00000243914 ATP10BO94823 1461 aa15.84■□□□□ 0.13
CTCFL-201ENST00000243914 TROQ12816 1431 aaPredicted RBP15.84■□□□□ 0.13
CTCFL-201ENST00000243914 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.83■□□□□ 0.13
CTCFL-201ENST00000243914 TONSLQ96HA7 1378 aa15.82■□□□□ 0.12
CTCFL-201ENST00000243914 MPHOSPH9Q99550 1183 aa15.82■□□□□ 0.12
CTCFL-201ENST00000243914 DDX10Q13206 875 aaKnown RBP15.81■□□□□ 0.12
CTCFL-201ENST00000243914 ABCC5O15440 1437 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms