RNA–Protein interactions for RNA: ENST00000240101.2

DUSP4-202, Transcript of dual specificity phosphatase 4, humanhuman

TSL 1 (best) BASIC

Gene DUSP4, Length 2,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-202ENST00000240101 FANCIQ9NVI1 1328 aa17.41■□□□□ 0.38
DUSP4-202ENST00000240101 RRBP1Q9P2E9 1410 aaKnown RBP17.38■□□□□ 0.37
DUSP4-202ENST00000240101 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
DUSP4-202ENST00000240101 ERICH3Q5RHP9 1530 aa17.37■□□□□ 0.37
DUSP4-202ENST00000240101 IL27Q8NEV9 243 aa17.35■□□□□ 0.37
DUSP4-202ENST00000240101 CCNB3Q8WWL7 1395 aa17.35■□□□□ 0.37
DUSP4-202ENST00000240101 BIVM-ERCC5R4GMW8 1640 aa17.34■□□□□ 0.37
DUSP4-202ENST00000240101 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
DUSP4-202ENST00000240101 RAB3GAP2Q9H2M9 1393 aa17.28■□□□□ 0.36
DUSP4-202ENST00000240101 CUX2O14529 1486 aa17.28■□□□□ 0.36
DUSP4-202ENST00000240101 CUX1P39880 1505 aa17.28■□□□□ 0.36
DUSP4-202ENST00000240101 ARHGAP35Q9NRY4 1499 aa17.28■□□□□ 0.36
DUSP4-202ENST00000240101 KIF27Q86VH2 1401 aa17.27■□□□□ 0.35
DUSP4-202ENST00000240101 HIRIP3Q9BW71 556 aaPredicted RBP17.27■□□□□ 0.35
DUSP4-202ENST00000240101 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
DUSP4-202ENST00000240101 SIN3AQ96ST3 1273 aa17.24■□□□□ 0.35
DUSP4-202ENST00000240101 MAPKBP1O60336 1514 aa17.23■□□□□ 0.35
DUSP4-202ENST00000240101 EIF5BO60841 1220 aaKnown RBP17.21■□□□□ 0.35
DUSP4-202ENST00000240101 NOP58Q9Y2X3 529 aaKnown RBP17.21■□□□□ 0.35
DUSP4-202ENST00000240101 RTL5Q5HYW3 569 aaPredicted RBP17.2■□□□□ 0.34
DUSP4-202ENST00000240101 UBE2Q2Q8WVN8 375 aa17.19■□□□□ 0.34
DUSP4-202ENST00000240101 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
DUSP4-202ENST00000240101 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
DUSP4-202ENST00000240101 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
DUSP4-202ENST00000240101 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
DUSP4-202ENST00000240101 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
DUSP4-202ENST00000240101 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
DUSP4-202ENST00000240101 P3H3Q8IVL6 736 aa17.12■□□□□ 0.33
DUSP4-202ENST00000240101 ATP1B4Q9UN42 357 aaPredicted RBP17.12■□□□□ 0.33
DUSP4-202ENST00000240101 ANP32CO43423 234 aa17.11■□□□□ 0.33
DUSP4-202ENST00000240101 IGF1RP08069 1367 aa17.11■□□□□ 0.33
DUSP4-202ENST00000240101 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
DUSP4-202ENST00000240101 TIAM1Q13009 1591 aa17.1■□□□□ 0.33
DUSP4-202ENST00000240101 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
DUSP4-202ENST00000240101 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
DUSP4-202ENST00000240101 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
DUSP4-202ENST00000240101 CFTRP13569 1480 aa17.07■□□□□ 0.32
DUSP4-202ENST00000240101 CARMIL1Q5VZK9 1371 aa17.04■□□□□ 0.32
DUSP4-202ENST00000240101 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
DUSP4-202ENST00000240101 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
DUSP4-202ENST00000240101 PPP4R2Q9NY27 417 aa17■□□□□ 0.31
DUSP4-202ENST00000240101 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
DUSP4-202ENST00000240101 ANP32AP39687 249 aaKnown RBP16.96■□□□□ 0.31
DUSP4-202ENST00000240101 CCER2I3L3R5 266 aa16.95■□□□□ 0.3
DUSP4-202ENST00000240101 LAS1LQ9Y4W2 734 aaKnown RBP16.95■□□□□ 0.3
DUSP4-202ENST00000240101 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
DUSP4-202ENST00000240101 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
DUSP4-202ENST00000240101 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
DUSP4-202ENST00000240101 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
DUSP4-202ENST00000240101 FHOD3Q2V2M9 1422 aa16.93■□□□□ 0.3
DUSP4-202ENST00000240101 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
DUSP4-202ENST00000240101 BRPF3Q9ULD4 1205 aa16.92■□□□□ 0.3
DUSP4-202ENST00000240101 IPO9Q96P70 1041 aaKnown RBP16.91■□□□□ 0.3
DUSP4-202ENST00000240101 PKNOX2Q96KN3 472 aa16.9■□□□□ 0.3
DUSP4-202ENST00000240101 NEFMP07197 916 aa16.89■□□□□ 0.29
DUSP4-202ENST00000240101 TONSLQ96HA7 1378 aa16.89■□□□□ 0.29
DUSP4-202ENST00000240101 CFAP43Q8NDM7 1665 aa16.89■□□□□ 0.29
DUSP4-202ENST00000240101 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
DUSP4-202ENST00000240101 PTPRKQ15262 1439 aa16.82■□□□□ 0.28
DUSP4-202ENST00000240101 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
DUSP4-202ENST00000240101 CCDC18Q5T9S5 1454 aa16.81■□□□□ 0.28
DUSP4-202ENST00000240101 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
DUSP4-202ENST00000240101 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
DUSP4-202ENST00000240101 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
DUSP4-202ENST00000240101 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
DUSP4-202ENST00000240101 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
DUSP4-202ENST00000240101 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
DUSP4-202ENST00000240101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.78■□□□□ 0.28
DUSP4-202ENST00000240101 MTUS2Q5JR59 1369 aa16.76■□□□□ 0.27
DUSP4-202ENST00000240101 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
DUSP4-202ENST00000240101 AQRO60306 1485 aaKnown RBP eCLIP16.75■□□□□ 0.27
DUSP4-202ENST00000240101 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
DUSP4-202ENST00000240101 HFM1A2PYH4 1435 aa16.73■□□□□ 0.27
DUSP4-202ENST00000240101 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
DUSP4-202ENST00000240101 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
DUSP4-202ENST00000240101 NAIPQ13075 1403 aa16.72■□□□□ 0.27
DUSP4-202ENST00000240101 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
DUSP4-202ENST00000240101 PTPN23Q9H3S7 1636 aa16.72■□□□□ 0.27
DUSP4-202ENST00000240101 RRP7BPQ9NSQ0 103 aa16.71■□□□□ 0.27
DUSP4-202ENST00000240101 CHIC2Q9UKJ5 165 aa16.71■□□□□ 0.27
DUSP4-202ENST00000240101 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
DUSP4-202ENST00000240101 EFCAB5A4FU69 1503 aa16.7■□□□□ 0.26
DUSP4-202ENST00000240101 KDM5BQ9UGL1 1544 aa16.69■□□□□ 0.26
DUSP4-202ENST00000240101 FMN1Q68DA7 1419 aa16.68■□□□□ 0.26
DUSP4-202ENST00000240101 SNAPC4Q5SXM2 1469 aa16.68■□□□□ 0.26
DUSP4-202ENST00000240101 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
DUSP4-202ENST00000240101 NCOA2Q15596 1464 aa16.66■□□□□ 0.26
DUSP4-202ENST00000240101 PLEKHG5O94827 1062 aa16.65■□□□□ 0.26
DUSP4-202ENST00000240101 VSIG10Q8N0Z9 540 aa16.65■□□□□ 0.26
DUSP4-202ENST00000240101 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
DUSP4-202ENST00000240101 MYOM3Q5VTT5 1437 aa16.64■□□□□ 0.25
DUSP4-202ENST00000240101 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
DUSP4-202ENST00000240101 WASHC2CQ9Y4E1 1318 aa16.63■□□□□ 0.25
DUSP4-202ENST00000240101 FOXD1Q16676 465 aa16.63■□□□□ 0.25
DUSP4-202ENST00000240101 CTTNBP2Q8WZ74 1663 aa16.63■□□□□ 0.25
DUSP4-202ENST00000240101 LRRIQ1Q96JM4 1722 aa16.63■□□□□ 0.25
DUSP4-202ENST00000240101 GSE1Q14687 1217 aa16.62■□□□□ 0.25
DUSP4-202ENST00000240101 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
DUSP4-202ENST00000240101 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
DUSP4-202ENST00000240101 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 205.6 ms