RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 NPM1P06748 294 aaKnown RBP eCLIP17.33■□□□□ 0.36
TNFAIP3-201ENST00000237289 PRXQ9BXM0 1461 aa17.33■□□□□ 0.36
TNFAIP3-201ENST00000237289 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.36
TNFAIP3-201ENST00000237289 CLIP1P30622 1438 aa17.32■□□□□ 0.36
TNFAIP3-201ENST00000237289 CUL7Q14999 1698 aa17.32■□□□□ 0.36
TNFAIP3-201ENST00000237289 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
TNFAIP3-201ENST00000237289 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
TNFAIP3-201ENST00000237289 ARID3CA6NKF2 412 aa17.29■□□□□ 0.36
TNFAIP3-201ENST00000237289 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
TNFAIP3-201ENST00000237289 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
TNFAIP3-201ENST00000237289 KIF21BO75037 1637 aa17.23■□□□□ 0.35
TNFAIP3-201ENST00000237289 ADAMTS12P58397 1594 aa17.23■□□□□ 0.35
TNFAIP3-201ENST00000237289 KIAA0586Q9BVV6 1533 aa17.21■□□□□ 0.35
TNFAIP3-201ENST00000237289 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
TNFAIP3-201ENST00000237289 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
TNFAIP3-201ENST00000237289 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
TNFAIP3-201ENST00000237289 PPARGC1BQ86YN6 1023 aaKnown RBP17.16■□□□□ 0.34
TNFAIP3-201ENST00000237289 PTPRGP23470 1445 aa17.15■□□□□ 0.34
TNFAIP3-201ENST00000237289 FHOD3Q2V2M9 1422 aa17.11■□□□□ 0.33
TNFAIP3-201ENST00000237289 IQGAP2Q13576 1575 aa17.11■□□□□ 0.33
TNFAIP3-201ENST00000237289 NUP160Q12769 1436 aa17.1■□□□□ 0.33
TNFAIP3-201ENST00000237289 FMN1Q68DA7 1419 aa17.09■□□□□ 0.33
TNFAIP3-201ENST00000237289 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
TNFAIP3-201ENST00000237289 KCNH8Q96L42 1107 aa17.03■□□□□ 0.32
TNFAIP3-201ENST00000237289 CHD1O14646 1710 aa17.03■□□□□ 0.32
TNFAIP3-201ENST00000237289 CEP170Q5SW79 1584 aa17.01■□□□□ 0.31
TNFAIP3-201ENST00000237289 MTUS2Q5JR59 1369 aa17■□□□□ 0.31
TNFAIP3-201ENST00000237289 EFCAB5A4FU69 1503 aa16.99■□□□□ 0.31
TNFAIP3-201ENST00000237289 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
TNFAIP3-201ENST00000237289 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
TNFAIP3-201ENST00000237289 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
TNFAIP3-201ENST00000237289 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
TNFAIP3-201ENST00000237289 CTTNBP2Q8WZ74 1663 aa16.93■□□□□ 0.3
TNFAIP3-201ENST00000237289 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
TNFAIP3-201ENST00000237289 DNAJC5Q9H3Z4 198 aa16.9■□□□□ 0.3
TNFAIP3-201ENST00000237289 ZNF777Q9ULD5 760 aaPredicted RBP16.9■□□□□ 0.3
TNFAIP3-201ENST00000237289 UACAQ9BZF9 1416 aa16.9■□□□□ 0.3
TNFAIP3-201ENST00000237289 ARAP1Q96P48 1450 aa16.89■□□□□ 0.29
TNFAIP3-201ENST00000237289 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
TNFAIP3-201ENST00000237289 ITGAEP38570 1179 aa16.87■□□□□ 0.29
TNFAIP3-201ENST00000237289 DISP1Q96F81 1524 aa16.84■□□□□ 0.29
TNFAIP3-201ENST00000237289 KIAA0556O60303 1618 aa16.84■□□□□ 0.29
TNFAIP3-201ENST00000237289 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.29
TNFAIP3-201ENST00000237289 PLB1Q6P1J6 1458 aa16.83■□□□□ 0.28
TNFAIP3-201ENST00000237289 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
TNFAIP3-201ENST00000237289 ARHGEF11O15085 1522 aa16.81■□□□□ 0.28
TNFAIP3-201ENST00000237289 CFDP1Q9UEE9 299 aaPredicted RBP16.78■□□□□ 0.28
TNFAIP3-201ENST00000237289 FYCO1Q9BQS8 1478 aa16.77■□□□□ 0.28
TNFAIP3-201ENST00000237289 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.28
TNFAIP3-201ENST00000237289 FAM69CQ0P6D2 419 aa16.77■□□□□ 0.28
TNFAIP3-201ENST00000237289 KANK4Q5T7N3 995 aaPredicted RBP16.77■□□□□ 0.27
TNFAIP3-201ENST00000237289 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.27
TNFAIP3-201ENST00000237289 TRIM26Q12899 539 aaPredicted RBP16.74■□□□□ 0.27
TNFAIP3-201ENST00000237289 PCGF6Q9BYE7 350 aa16.74■□□□□ 0.27
TNFAIP3-201ENST00000237289 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
TNFAIP3-201ENST00000237289 ERCC6L2Q5T890 1561 aa16.72■□□□□ 0.27
TNFAIP3-201ENST00000237289 SAMD9Q5K651 1589 aa16.72■□□□□ 0.27
TNFAIP3-201ENST00000237289 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
TNFAIP3-201ENST00000237289 EFCAB2Q5VUJ9 269 aa16.69■□□□□ 0.26
TNFAIP3-201ENST00000237289 TSPY4P0CV99 314 aa16.68■□□□□ 0.26
TNFAIP3-201ENST00000237289 TSPY10P0CW01 314 aa16.68■□□□□ 0.26
TNFAIP3-201ENST00000237289 RAPGEF6Q8TEU7 1601 aa16.68■□□□□ 0.26
TNFAIP3-201ENST00000237289 PCF11O94913 1555 aaKnown RBP16.67■□□□□ 0.26
TNFAIP3-201ENST00000237289 ABCC2Q92887 1545 aa16.67■□□□□ 0.26
TNFAIP3-201ENST00000237289 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
TNFAIP3-201ENST00000237289 SHROOM2Q13796 1616 aa16.65■□□□□ 0.26
TNFAIP3-201ENST00000237289 ATP10BO94823 1461 aa16.65■□□□□ 0.26
TNFAIP3-201ENST00000237289 NUP153P49790 1475 aaKnown RBP16.64■□□□□ 0.25
TNFAIP3-201ENST00000237289 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
TNFAIP3-201ENST00000237289 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
TNFAIP3-201ENST00000237289 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
TNFAIP3-201ENST00000237289 TROQ12816 1431 aaPredicted RBP16.64■□□□□ 0.25
TNFAIP3-201ENST00000237289 ASXL2Q76L83 1435 aa16.61■□□□□ 0.25
TNFAIP3-201ENST00000237289 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
TNFAIP3-201ENST00000237289 UHRF1BP1LA0JNW5 1464 aa16.6■□□□□ 0.25
TNFAIP3-201ENST00000237289 CHIC2Q9UKJ5 165 aa16.59■□□□□ 0.25
TNFAIP3-201ENST00000237289 ABCA8O94911 1581 aa16.57■□□□□ 0.24
TNFAIP3-201ENST00000237289 TIAM1Q13009 1591 aa16.56■□□□□ 0.24
TNFAIP3-201ENST00000237289 EHBP1L1Q8N3D4 1523 aa16.55■□□□□ 0.24
TNFAIP3-201ENST00000237289 WDR7Q9Y4E6 1490 aa16.55■□□□□ 0.24
TNFAIP3-201ENST00000237289 NCOA2Q15596 1464 aa16.53■□□□□ 0.24
TNFAIP3-201ENST00000237289 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
TNFAIP3-201ENST00000237289 HNRNPMP52272 730 aaKnown RBP eCLIP16.52■□□□□ 0.24
TNFAIP3-201ENST00000237289 KDM5BQ9UGL1 1544 aa16.52■□□□□ 0.24
TNFAIP3-201ENST00000237289 MAP3K1Q13233 1512 aa16.51■□□□□ 0.23
TNFAIP3-201ENST00000237289 RSPH4AQ5TD94 716 aa16.51■□□□□ 0.23
TNFAIP3-201ENST00000237289 TRIM52Q96A61 297 aa16.51■□□□□ 0.23
TNFAIP3-201ENST00000237289 ARHGAP5Q13017 1502 aa16.48■□□□□ 0.23
TNFAIP3-201ENST00000237289 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
TNFAIP3-201ENST00000237289 MYOM3Q5VTT5 1437 aa16.48■□□□□ 0.23
TNFAIP3-201ENST00000237289 KIF14Q15058 1648 aa16.48■□□□□ 0.23
TNFAIP3-201ENST00000237289 RRP7BPQ9NSQ0 103 aa16.47■□□□□ 0.23
TNFAIP3-201ENST00000237289 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
TNFAIP3-201ENST00000237289 PHLDB1Q86UU1 1377 aa16.46■□□□□ 0.23
TNFAIP3-201ENST00000237289 SPAG9O60271 1321 aaKnown RBP16.45■□□□□ 0.22
TNFAIP3-201ENST00000237289 ZNF644Q9H582 1327 aaPredicted RBP16.45■□□□□ 0.22
TNFAIP3-201ENST00000237289 SUPT6HQ7KZ85 1726 aaKnown RBP16.44■□□□□ 0.22
TNFAIP3-201ENST00000237289 ADCY10Q96PN6 1610 aa16.44■□□□□ 0.22
TNFAIP3-201ENST00000237289 ZCCHC11Q5TAX3 1644 aaKnown RBP16.42■□□□□ 0.22
TNFAIP3-201ENST00000237289 FGD6Q6ZV73 1430 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms