RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 KIF21BO75037 1637 aa16.59■□□□□ 0.25
HMGCL-201ENST00000235958 JPH4Q96JJ6 628 aa16.57■□□□□ 0.24
HMGCL-201ENST00000235958 KIAA0586Q9BVV6 1533 aa16.55■□□□□ 0.24
HMGCL-201ENST00000235958 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
HMGCL-201ENST00000235958 CLASP1Q7Z460 1538 aa16.52■□□□□ 0.24
HMGCL-201ENST00000235958 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
HMGCL-201ENST00000235958 IQGAP2Q13576 1575 aa16.46■□□□□ 0.23
HMGCL-201ENST00000235958 CTTNBP2Q8WZ74 1663 aa16.46■□□□□ 0.23
HMGCL-201ENST00000235958 TNIKQ9UKE5 1360 aa16.45■□□□□ 0.22
HMGCL-201ENST00000235958 PRG4Q92954 1404 aaPredicted RBP16.45■□□□□ 0.22
HMGCL-201ENST00000235958 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
HMGCL-201ENST00000235958 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
HMGCL-201ENST00000235958 UGGT2Q9NYU1 1516 aa16.4■□□□□ 0.22
HMGCL-201ENST00000235958 CARMIL2Q6F5E8 1435 aa16.37■□□□□ 0.21
HMGCL-201ENST00000235958 ERCC6L2Q5T890 1561 aa16.37■□□□□ 0.21
HMGCL-201ENST00000235958 ARHGEF11O15085 1522 aa16.36■□□□□ 0.21
HMGCL-201ENST00000235958 DISP1Q96F81 1524 aa16.35■□□□□ 0.21
HMGCL-201ENST00000235958 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
HMGCL-201ENST00000235958 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
HMGCL-201ENST00000235958 RIMBP3CA6NJZ7 1639 aa16.33■□□□□ 0.2
HMGCL-201ENST00000235958 RIMBP3BA6NNM3 1639 aa16.33■□□□□ 0.2
HMGCL-201ENST00000235958 RIMBP3Q9UFD9 1639 aa16.33■□□□□ 0.2
HMGCL-201ENST00000235958 PTPRGP23470 1445 aa16.3■□□□□ 0.2
HMGCL-201ENST00000235958 CLIP1P30622 1438 aa16.29■□□□□ 0.2
HMGCL-201ENST00000235958 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
HMGCL-201ENST00000235958 ARHGAP35Q9NRY4 1499 aa16.28■□□□□ 0.2
HMGCL-201ENST00000235958 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
HMGCL-201ENST00000235958 SAMD9Q5K651 1589 aa16.26■□□□□ 0.19
HMGCL-201ENST00000235958 EFCAB5A4FU69 1503 aa16.25■□□□□ 0.19
HMGCL-201ENST00000235958 ARAP1Q96P48 1450 aa16.25■□□□□ 0.19
HMGCL-201ENST00000235958 FHOD3Q2V2M9 1422 aa16.25■□□□□ 0.19
HMGCL-201ENST00000235958 ATP1B4Q9UN42 357 aaPredicted RBP16.17■□□□□ 0.18
HMGCL-201ENST00000235958 UACAQ9BZF9 1416 aa16.17■□□□□ 0.18
HMGCL-201ENST00000235958 PLB1Q6P1J6 1458 aa16.16■□□□□ 0.18
HMGCL-201ENST00000235958 FMN1Q68DA7 1419 aa16.16■□□□□ 0.18
HMGCL-201ENST00000235958 NPM1P06748 294 aaKnown RBP eCLIP16.14■□□□□ 0.17
HMGCL-201ENST00000235958 ARID3CA6NKF2 412 aa16.12■□□□□ 0.17
HMGCL-201ENST00000235958 ABCA8O94911 1581 aa16.11■□□□□ 0.17
HMGCL-201ENST00000235958 UHRF1BP1LA0JNW5 1464 aa16.1■□□□□ 0.17
HMGCL-201ENST00000235958 ADCY10Q96PN6 1610 aa16.08■□□□□ 0.17
HMGCL-201ENST00000235958 ABCC2Q92887 1545 aa16.08■□□□□ 0.16
HMGCL-201ENST00000235958 RAPGEF6Q8TEU7 1601 aa16.08■□□□□ 0.16
HMGCL-201ENST00000235958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
HMGCL-201ENST00000235958 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
HMGCL-201ENST00000235958 CASKIN1Q8WXD9 1431 aa16.07■□□□□ 0.16
HMGCL-201ENST00000235958 VPS8Q8N3P4 1428 aa16.06■□□□□ 0.16
HMGCL-201ENST00000235958 ATP10BO94823 1461 aa16.05■□□□□ 0.16
HMGCL-201ENST00000235958 NUP153P49790 1475 aaKnown RBP16.04■□□□□ 0.16
HMGCL-201ENST00000235958 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
HMGCL-201ENST00000235958 FYCO1Q9BQS8 1478 aa16■□□□□ 0.15
HMGCL-201ENST00000235958 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
HMGCL-201ENST00000235958 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
HMGCL-201ENST00000235958 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
HMGCL-201ENST00000235958 APLP2Q06481 763 aa15.98■□□□□ 0.15
HMGCL-201ENST00000235958 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
HMGCL-201ENST00000235958 ZCCHC11Q5TAX3 1644 aaKnown RBP15.97■□□□□ 0.15
HMGCL-201ENST00000235958 HECW1Q76N89 1606 aa15.97■□□□□ 0.15
HMGCL-201ENST00000235958 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
HMGCL-201ENST00000235958 CDK13Q14004 1512 aaKnown RBP15.96■□□□□ 0.15
HMGCL-201ENST00000235958 LRRIQ1Q96JM4 1722 aa15.96■□□□□ 0.15
HMGCL-201ENST00000235958 ASXL2Q76L83 1435 aa15.95■□□□□ 0.14
HMGCL-201ENST00000235958 CCDC18Q5T9S5 1454 aa15.93■□□□□ 0.14
HMGCL-201ENST00000235958 MAPKBP1O60336 1514 aa15.91■□□□□ 0.14
HMGCL-201ENST00000235958 KANK4Q5T7N3 995 aaPredicted RBP15.91■□□□□ 0.14
HMGCL-201ENST00000235958 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
HMGCL-201ENST00000235958 FAM69CQ0P6D2 419 aa15.89■□□□□ 0.13
HMGCL-201ENST00000235958 WDR7Q9Y4E6 1490 aa15.88■□□□□ 0.13
HMGCL-201ENST00000235958 MAP3K1Q13233 1512 aa15.87■□□□□ 0.13
HMGCL-201ENST00000235958 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
HMGCL-201ENST00000235958 PPARGC1BQ86YN6 1023 aaKnown RBP15.86■□□□□ 0.13
HMGCL-201ENST00000235958 TROQ12816 1431 aaPredicted RBP15.85■□□□□ 0.13
HMGCL-201ENST00000235958 MAGI3Q5TCQ9 1506 aa15.85■□□□□ 0.13
HMGCL-201ENST00000235958 TIAM1Q13009 1591 aa15.85■□□□□ 0.13
HMGCL-201ENST00000235958 ABCC10Q5T3U5 1492 aa15.84■□□□□ 0.13
HMGCL-201ENST00000235958 LRRC9Q6ZRR7 1453 aa15.82■□□□□ 0.12
HMGCL-201ENST00000235958 CFAP43Q8NDM7 1665 aa15.8■□□□□ 0.12
HMGCL-201ENST00000235958 DIP2BQ9P265 1576 aa15.78■□□□□ 0.12
HMGCL-201ENST00000235958 KIF13AQ9H1H9 1805 aa15.78■□□□□ 0.12
HMGCL-201ENST00000235958 GLI2P10070 1586 aa15.77■□□□□ 0.11
HMGCL-201ENST00000235958 CD109Q6YHK3 1445 aa15.77■□□□□ 0.11
HMGCL-201ENST00000235958 KIF14Q15058 1648 aa15.76■□□□□ 0.11
HMGCL-201ENST00000235958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
HMGCL-201ENST00000235958 EHBP1L1Q8N3D4 1523 aa15.75■□□□□ 0.11
HMGCL-201ENST00000235958 ABCA9Q8IUA7 1624 aa15.73■□□□□ 0.11
HMGCL-201ENST00000235958 CCNB3Q8WWL7 1395 aa15.73■□□□□ 0.11
HMGCL-201ENST00000235958 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
HMGCL-201ENST00000235958 TSPOAP1O95153 1857 aa15.72■□□□□ 0.11
HMGCL-201ENST00000235958 SUPT6HQ7KZ85 1726 aaKnown RBP15.71■□□□□ 0.11
HMGCL-201ENST00000235958 PLCH2O75038 1416 aa15.71■□□□□ 0.11
HMGCL-201ENST00000235958 EFCAB2Q5VUJ9 269 aa15.71■□□□□ 0.11
HMGCL-201ENST00000235958 TTC37Q6PGP7 1564 aa15.7■□□□□ 0.1
HMGCL-201ENST00000235958 MAP3K4Q9Y6R4 1608 aa15.7■□□□□ 0.1
HMGCL-201ENST00000235958 CFDP1Q9UEE9 299 aaPredicted RBP15.7■□□□□ 0.1
HMGCL-201ENST00000235958 GPATCH8Q9UKJ3 1502 aaKnown RBP15.69■□□□□ 0.1
HMGCL-201ENST00000235958 ZNF777Q9ULD5 760 aaPredicted RBP15.68■□□□□ 0.1
HMGCL-201ENST00000235958 PHLDB1Q86UU1 1377 aa15.66■□□□□ 0.1
HMGCL-201ENST00000235958 CDC42BPAQ5VT25 1732 aa15.65■□□□□ 0.1
HMGCL-201ENST00000235958 MYO5CQ9NQX4 1742 aa15.65■□□□□ 0.1
HMGCL-201ENST00000235958 ZNF644Q9H582 1327 aaPredicted RBP15.65■□□□□ 0.1
HMGCL-201ENST00000235958 CDC42BPBQ9Y5S2 1711 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms