RNA–Protein interactions for RNA: ENST00000234310.7

PPP3R1-201, Transcript of protein phosphatase 3 regulatory subunit B, alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP3R1, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3R1-201ENST00000234310 DHX57Q6P158 1386 aaKnown RBP20.93■□□□□ 0.94
PPP3R1-201ENST00000234310 PCF11O94913 1555 aaKnown RBP20.92■□□□□ 0.94
PPP3R1-201ENST00000234310 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.93
PPP3R1-201ENST00000234310 WDR97A6NE52 1622 aa20.88■□□□□ 0.93
PPP3R1-201ENST00000234310 PHLDB1Q86UU1 1377 aa20.87■□□□□ 0.93
PPP3R1-201ENST00000234310 LRRC9Q6ZRR7 1453 aa20.86■□□□□ 0.93
PPP3R1-201ENST00000234310 PDS5BQ9NTI5 1447 aa20.84■□□□□ 0.93
PPP3R1-201ENST00000234310 CUL7Q14999 1698 aa20.83■□□□□ 0.92
PPP3R1-201ENST00000234310 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
PPP3R1-201ENST00000234310 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
PPP3R1-201ENST00000234310 CTTNBP2Q8WZ74 1663 aa20.81■□□□□ 0.92
PPP3R1-201ENST00000234310 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
PPP3R1-201ENST00000234310 NEUROD1Q13562 356 aa20.8■□□□□ 0.92
PPP3R1-201ENST00000234310 FHAD1B1AJZ9 1412 aa20.79■□□□□ 0.92
PPP3R1-201ENST00000234310 CFAP43Q8NDM7 1665 aa20.76■□□□□ 0.91
PPP3R1-201ENST00000234310 RAB3GAP2Q9H2M9 1393 aa20.75■□□□□ 0.91
PPP3R1-201ENST00000234310 MAP3K1Q13233 1512 aa20.75■□□□□ 0.91
PPP3R1-201ENST00000234310 MIER1Q8N108 512 aa20.74■□□□□ 0.91
PPP3R1-201ENST00000234310 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.915e-6■■■□□ 16.9
PPP3R1-201ENST00000234310 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
PPP3R1-201ENST00000234310 YTHDC1Q96MU7 727 aaKnown RBP20.72■□□□□ 0.91
PPP3R1-201ENST00000234310 EFCAB5A4FU69 1503 aa20.71■□□□□ 0.91
PPP3R1-201ENST00000234310 CASKIN1Q8WXD9 1431 aa20.7■□□□□ 0.9
PPP3R1-201ENST00000234310 FYCO1Q9BQS8 1478 aa20.69■□□□□ 0.9
PPP3R1-201ENST00000234310 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
PPP3R1-201ENST00000234310 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
PPP3R1-201ENST00000234310 LRRIQ1Q96JM4 1722 aa20.67■□□□□ 0.9
PPP3R1-201ENST00000234310 ARID3CA6NKF2 412 aa20.64■□□□□ 0.89
PPP3R1-201ENST00000234310 CLSPNQ9HAW4 1339 aa20.64■□□□□ 0.89
PPP3R1-201ENST00000234310 MAPKBP1O60336 1514 aa20.63■□□□□ 0.89
PPP3R1-201ENST00000234310 SAMD9Q5K651 1589 aa20.62■□□□□ 0.89
PPP3R1-201ENST00000234310 SETD5Q9C0A6 1442 aa20.62■□□□□ 0.89
PPP3R1-201ENST00000234310 FMN1Q68DA7 1419 aa20.61■□□□□ 0.89
PPP3R1-201ENST00000234310 PBRM1Q86U86 1689 aa20.6■□□□□ 0.89
PPP3R1-201ENST00000234310 ZNF608Q9ULD9 1512 aaPredicted RBP20.6■□□□□ 0.89
PPP3R1-201ENST00000234310 SIN3AQ96ST3 1273 aa20.6■□□□□ 0.89
PPP3R1-201ENST00000234310 MTUS2Q5JR59 1369 aa20.58■□□□□ 0.89
PPP3R1-201ENST00000234310 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.88
PPP3R1-201ENST00000234310 GRIN2BQ13224 1484 aa20.54■□□□□ 0.88
PPP3R1-201ENST00000234310 FGD6Q6ZV73 1430 aa20.53■□□□□ 0.88
PPP3R1-201ENST00000234310 PTPRKQ15262 1439 aa20.52■□□□□ 0.88
PPP3R1-201ENST00000234310 GTF3C3Q9Y5Q9 886 aa20.52■□□□□ 0.88
PPP3R1-201ENST00000234310 MAGI3Q5TCQ9 1506 aa20.52■□□□□ 0.87
PPP3R1-201ENST00000234310 ADAMTS12P58397 1594 aa20.51■□□□□ 0.87
PPP3R1-201ENST00000234310 CENPBP07199 599 aaPredicted RBP20.51■□□□□ 0.87
PPP3R1-201ENST00000234310 NCOA2Q15596 1464 aa20.49■□□□□ 0.87
PPP3R1-201ENST00000234310 IQGAP2Q13576 1575 aa20.46■□□□□ 0.87
PPP3R1-201ENST00000234310 CDK13Q14004 1512 aaKnown RBP20.44■□□□□ 0.86
PPP3R1-201ENST00000234310 CHIC2Q9UKJ5 165 aa20.4■□□□□ 0.86
PPP3R1-201ENST00000234310 MYOM3Q5VTT5 1437 aa20.4■□□□□ 0.86
PPP3R1-201ENST00000234310 WDR62O43379 1518 aa20.4■□□□□ 0.86
PPP3R1-201ENST00000234310 HIRIP3Q9BW71 556 aaPredicted RBP20.4■□□□□ 0.86
PPP3R1-201ENST00000234310 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
PPP3R1-201ENST00000234310 SUPT6HQ7KZ85 1726 aaKnown RBP20.38■□□□□ 0.85
PPP3R1-201ENST00000234310 ERCC6Q03468 1493 aa20.38■□□□□ 0.85
PPP3R1-201ENST00000234310 EHBP1L1Q8N3D4 1523 aa20.37■□□□□ 0.85
PPP3R1-201ENST00000234310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.36■□□□□ 0.85
PPP3R1-201ENST00000234310 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
PPP3R1-201ENST00000234310 EIF4G3O43432 1585 aaKnown RBP20.36■□□□□ 0.85
PPP3R1-201ENST00000234310 CCDC18Q5T9S5 1454 aa20.36■□□□□ 0.85
PPP3R1-201ENST00000234310 EPRSP07814 1512 aaKnown RBP20.36■□□□□ 0.85
PPP3R1-201ENST00000234310 UGGT2Q9NYU1 1516 aa20.35■□□□□ 0.85
PPP3R1-201ENST00000234310 FBLN2P98095 1184 aa20.35■□□□□ 0.85
PPP3R1-201ENST00000234310 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
PPP3R1-201ENST00000234310 PTPN23Q9H3S7 1636 aa20.34■□□□□ 0.85
PPP3R1-201ENST00000234310 HECW1Q76N89 1606 aa20.33■□□□□ 0.84
PPP3R1-201ENST00000234310 NAIPQ13075 1403 aa20.31■□□□□ 0.84
PPP3R1-201ENST00000234310 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
PPP3R1-201ENST00000234310 DISP1Q96F81 1524 aa20.3■□□□□ 0.84
PPP3R1-201ENST00000234310 HFM1A2PYH4 1435 aa20.3■□□□□ 0.84
PPP3R1-201ENST00000234310 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
PPP3R1-201ENST00000234310 KCNH8Q96L42 1107 aa20.28■□□□□ 0.84
PPP3R1-201ENST00000234310 KIAA0556O60303 1618 aa20.26■□□□□ 0.83
PPP3R1-201ENST00000234310 KIAA0586Q9BVV6 1533 aa20.25■□□□□ 0.83
PPP3R1-201ENST00000234310 KDM6BO15054 1643 aa20.25■□□□□ 0.83
PPP3R1-201ENST00000234310 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
PPP3R1-201ENST00000234310 ZNF644Q9H582 1327 aaPredicted RBP20.24■□□□□ 0.83
PPP3R1-201ENST00000234310 DDX10Q13206 875 aaKnown RBP20.23■□□□□ 0.83
PPP3R1-201ENST00000234310 PPP1R15AO75807 674 aaPredicted RBP20.22■□□□□ 0.83
PPP3R1-201ENST00000234310 UACAQ9BZF9 1416 aa20.22■□□□□ 0.83
PPP3R1-201ENST00000234310 NUP153P49790 1475 aaKnown RBP20.21■□□□□ 0.83
PPP3R1-201ENST00000234310 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
PPP3R1-201ENST00000234310 FOXD1Q16676 465 aa20.19■□□□□ 0.82
PPP3R1-201ENST00000234310 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
PPP3R1-201ENST00000234310 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
PPP3R1-201ENST00000234310 PLB1Q6P1J6 1458 aa20.17■□□□□ 0.82
PPP3R1-201ENST00000234310 TONSLQ96HA7 1378 aa20.17■□□□□ 0.82
PPP3R1-201ENST00000234310 DENND4BO75064 1496 aaPredicted RBP20.16■□□□□ 0.82
PPP3R1-201ENST00000234310 RAPGEF6Q8TEU7 1601 aa20.15■□□□□ 0.82
PPP3R1-201ENST00000234310 PRG4Q92954 1404 aaPredicted RBP20.15■□□□□ 0.82
PPP3R1-201ENST00000234310 SYNJ2O15056 1496 aa20.12■□□□□ 0.81
PPP3R1-201ENST00000234310 MAGI1Q96QZ7 1491 aaPredicted RBP20.12■□□□□ 0.81
PPP3R1-201ENST00000234310 JPH4Q96JJ6 628 aa20.09■□□□□ 0.81
PPP3R1-201ENST00000234310 GCC2Q8IWJ2 1684 aa20.09■□□□□ 0.81
PPP3R1-201ENST00000234310 MIA2Q96PC5 1412 aa20.08■□□□□ 0.81
PPP3R1-201ENST00000234310 ZNF777Q9ULD5 760 aaPredicted RBP20.08■□□□□ 0.8
PPP3R1-201ENST00000234310 TIMELESSQ9UNS1 1208 aa20.08■□□□□ 0.8
PPP3R1-201ENST00000234310 KDM5BQ9UGL1 1544 aa20.07■□□□□ 0.8
PPP3R1-201ENST00000234310 DAPK1P53355 1430 aa20.06■□□□□ 0.8
PPP3R1-201ENST00000234310 ABCC5O15440 1437 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms