RNA–Protein interactions for RNA: ENST00000230640.9

SKIV2L2-201, Transcript of Superkiller viralicidic activity 2-like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKIV2L2, Length 4,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L2-201ENST00000230640 TOP2BQ02880 1626 aa11.91□□□□□ -0.5
SKIV2L2-201ENST00000230640 RRP7BPQ9NSQ0 103 aa11.91□□□□□ -0.5
SKIV2L2-201ENST00000230640 KIF21BO75037 1637 aa11.9□□□□□ -0.5
SKIV2L2-201ENST00000230640 RAD54L2Q9Y4B4 1467 aa11.9□□□□□ -0.5
SKIV2L2-201ENST00000230640 CUX1P39880 1505 aa11.89□□□□□ -0.51
SKIV2L2-201ENST00000230640 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
SKIV2L2-201ENST00000230640 ANP32CO43423 234 aa11.88□□□□□ -0.51
SKIV2L2-201ENST00000230640 GTF3C3Q9Y5Q9 886 aa11.87□□□□□ -0.51
SKIV2L2-201ENST00000230640 NESP48681 1621 aa11.87□□□□□ -0.51
SKIV2L2-201ENST00000230640 ACIN1Q9UKV3 1341 aaKnown RBP11.87□□□□□ -0.51
SKIV2L2-201ENST00000230640 FMN1Q68DA7 1419 aa11.87□□□□□ -0.51
SKIV2L2-201ENST00000230640 CLSPNQ9HAW4 1339 aa11.86□□□□□ -0.51
SKIV2L2-201ENST00000230640 PLEKHD1A6NEE1 506 aa11.85□□□□□ -0.51
SKIV2L2-201ENST00000230640 PRXQ9BXM0 1461 aa11.84□□□□□ -0.51
SKIV2L2-201ENST00000230640 ERICH3Q5RHP9 1530 aa11.84□□□□□ -0.51
SKIV2L2-201ENST00000230640 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.51
SKIV2L2-201ENST00000230640 TSPY4P0CV99 314 aa11.83□□□□□ -0.52
SKIV2L2-201ENST00000230640 TSPY10P0CW01 314 aa11.83□□□□□ -0.52
SKIV2L2-201ENST00000230640 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
SKIV2L2-201ENST00000230640 MIER1Q8N108 512 aa11.83□□□□□ -0.52
SKIV2L2-201ENST00000230640 CFDP1Q9UEE9 299 aaPredicted RBP11.82□□□□□ -0.52
SKIV2L2-201ENST00000230640 GAPVD1Q14C86 1478 aa11.81□□□□□ -0.52
SKIV2L2-201ENST00000230640 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
SKIV2L2-201ENST00000230640 HIRIP3Q9BW71 556 aaPredicted RBP11.8□□□□□ -0.52
SKIV2L2-201ENST00000230640 SETD5Q9C0A6 1442 aa11.79□□□□□ -0.52
SKIV2L2-201ENST00000230640 ARAP1Q96P48 1450 aa11.79□□□□□ -0.52
SKIV2L2-201ENST00000230640 SLC4A1APQ9BWU0 796 aaKnown RBP11.79□□□□□ -0.52
SKIV2L2-201ENST00000230640 RAB3GAP2Q9H2M9 1393 aa11.78□□□□□ -0.52
SKIV2L2-201ENST00000230640 TOPBP1Q92547 1522 aa11.78□□□□□ -0.52
SKIV2L2-201ENST00000230640 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.53
SKIV2L2-201ENST00000230640 DNAJC5BQ9UF47 199 aa11.76□□□□□ -0.53
SKIV2L2-201ENST00000230640 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
SKIV2L2-201ENST00000230640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.75□□□□□ -0.532e-8■□□□□ 11
SKIV2L2-201ENST00000230640 NPM1P06748 294 aaKnown RBP eCLIP11.73□□□□□ -0.53
SKIV2L2-201ENST00000230640 AQRO60306 1485 aaKnown RBP eCLIP11.73□□□□□ -0.532e-9■■□□□ 13.9
SKIV2L2-201ENST00000230640 CARMIL2Q6F5E8 1435 aa11.72□□□□□ -0.53
SKIV2L2-201ENST00000230640 DNMBPQ6XZF7 1577 aa11.72□□□□□ -0.53
SKIV2L2-201ENST00000230640 DHX57Q6P158 1386 aaKnown RBP11.7□□□□□ -0.54
SKIV2L2-201ENST00000230640 BIVM-ERCC5R4GMW8 1640 aa11.7□□□□□ -0.54
SKIV2L2-201ENST00000230640 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
SKIV2L2-201ENST00000230640 EIF4G2P78344 907 aaKnown RBP eCLIP11.68□□□□□ -0.54
SKIV2L2-201ENST00000230640 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
SKIV2L2-201ENST00000230640 BCANQ96GW7 911 aa11.66□□□□□ -0.54
SKIV2L2-201ENST00000230640 LRRC9Q6ZRR7 1453 aa11.66□□□□□ -0.54
SKIV2L2-201ENST00000230640 LAMC3Q9Y6N6 1575 aa11.66□□□□□ -0.54
SKIV2L2-201ENST00000230640 ABCA10Q8WWZ4 1543 aa11.66□□□□□ -0.54
SKIV2L2-201ENST00000230640 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
SKIV2L2-201ENST00000230640 PHLDB1Q86UU1 1377 aa11.66□□□□□ -0.54
SKIV2L2-201ENST00000230640 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
SKIV2L2-201ENST00000230640 MRC2Q9UBG0 1479 aa11.64□□□□□ -0.55
SKIV2L2-201ENST00000230640 CASKIN1Q8WXD9 1431 aa11.64□□□□□ -0.55
SKIV2L2-201ENST00000230640 GRIN2BQ13224 1484 aa11.64□□□□□ -0.55
SKIV2L2-201ENST00000230640 CCDC18Q5T9S5 1454 aa11.63□□□□□ -0.55
SKIV2L2-201ENST00000230640 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
SKIV2L2-201ENST00000230640 FOXD1Q16676 465 aa11.61□□□□□ -0.55
SKIV2L2-201ENST00000230640 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
SKIV2L2-201ENST00000230640 RRBP1Q9P2E9 1410 aaKnown RBP11.6□□□□□ -0.55
SKIV2L2-201ENST00000230640 FYCO1Q9BQS8 1478 aa11.6□□□□□ -0.55
SKIV2L2-201ENST00000230640 EFCAB5A4FU69 1503 aa11.6□□□□□ -0.55
SKIV2L2-201ENST00000230640 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
SKIV2L2-201ENST00000230640 URB2Q14146 1524 aaKnown RBP11.59□□□□□ -0.55
SKIV2L2-201ENST00000230640 FGD6Q6ZV73 1430 aa11.59□□□□□ -0.55
SKIV2L2-201ENST00000230640 RGL3Q3MIN7 710 aa11.59□□□□□ -0.55
SKIV2L2-201ENST00000230640 MPHOSPH9Q99550 1183 aa11.58□□□□□ -0.56
SKIV2L2-201ENST00000230640 FAM9BQ8IZU0 186 aa11.58□□□□□ -0.56
SKIV2L2-201ENST00000230640 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
SKIV2L2-201ENST00000230640 PPP1R15AO75807 674 aaPredicted RBP11.57□□□□□ -0.56
SKIV2L2-201ENST00000230640 TIAM1Q13009 1591 aa11.56□□□□□ -0.56
SKIV2L2-201ENST00000230640 MYOM3Q5VTT5 1437 aa11.56□□□□□ -0.56
SKIV2L2-201ENST00000230640 MRS2Q9HD23 443 aa11.55□□□□□ -0.56
SKIV2L2-201ENST00000230640 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
SKIV2L2-201ENST00000230640 PKD2Q13563 968 aa11.54□□□□□ -0.56
SKIV2L2-201ENST00000230640 ANKRD30AQ9BXX3 1397 aa11.53□□□□□ -0.56
SKIV2L2-201ENST00000230640 PTPRGP23470 1445 aa11.53□□□□□ -0.56
SKIV2L2-201ENST00000230640 CUL7Q14999 1698 aa11.53□□□□□ -0.56
SKIV2L2-201ENST00000230640 FKBP8Q14318 412 aa11.52□□□□□ -0.56
SKIV2L2-201ENST00000230640 CARD11Q9BXL7 1154 aa11.52□□□□□ -0.56
SKIV2L2-201ENST00000230640 HNRNPMP52272 730 aaKnown RBP eCLIP11.52□□□□□ -0.571e-8■■■■■ 29.3
SKIV2L2-201ENST00000230640 SNAPC4Q5SXM2 1469 aa11.51□□□□□ -0.57
SKIV2L2-201ENST00000230640 NUP155O75694 1391 aa11.5□□□□□ -0.57
SKIV2L2-201ENST00000230640 ZNF644Q9H582 1327 aaPredicted RBP11.5□□□□□ -0.57
SKIV2L2-201ENST00000230640 TMC1Q8TDI8 760 aa11.5□□□□□ -0.57
SKIV2L2-201ENST00000230640 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
SKIV2L2-201ENST00000230640 PRDM2Q13029 1718 aa11.49□□□□□ -0.57
SKIV2L2-201ENST00000230640 HSPA5P11021 654 aaKnown RBP11.49□□□□□ -0.57
SKIV2L2-201ENST00000230640 L3MBTL2Q969R5 705 aa11.49□□□□□ -0.57
SKIV2L2-201ENST00000230640 DCAF11Q8TEB1 546 aa11.48□□□□□ -0.57
SKIV2L2-201ENST00000230640 EFCAB2Q5VUJ9 269 aa11.48□□□□□ -0.57
SKIV2L2-201ENST00000230640 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.58
SKIV2L2-201ENST00000230640 ESF1Q9H501 851 aaKnown RBP11.46□□□□□ -0.58
SKIV2L2-201ENST00000230640 UACAQ9BZF9 1416 aa11.45□□□□□ -0.58
SKIV2L2-201ENST00000230640 IQGAP2Q13576 1575 aa11.45□□□□□ -0.58
SKIV2L2-201ENST00000230640 EHBP1L1Q8N3D4 1523 aa11.45□□□□□ -0.58
SKIV2L2-201ENST00000230640 KIAA0586Q9BVV6 1533 aa11.45□□□□□ -0.58
SKIV2L2-201ENST00000230640 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
SKIV2L2-201ENST00000230640 MAP3K1Q13233 1512 aa11.44□□□□□ -0.58
SKIV2L2-201ENST00000230640 RSPH4AQ5TD94 716 aa11.44□□□□□ -0.58
SKIV2L2-201ENST00000230640 SALL2Q9Y467 1007 aaPredicted RBP11.44□□□□□ -0.58
SKIV2L2-201ENST00000230640 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
SKIV2L2-201ENST00000230640 EPRSP07814 1512 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms