RNA–Protein interactions for RNA: ENST00000229416.10

GCLC-201, Transcript of glutamate-cysteine ligase catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCLC, Length 3,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCLC-201ENST00000229416 SIN3AQ96ST3 1273 aa20.86■□□□□ 0.93
GCLC-201ENST00000229416 CADPSQ9ULU8 1353 aa20.84■□□□□ 0.93
GCLC-201ENST00000229416 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
GCLC-201ENST00000229416 RTN4Q9NQC3 1192 aaKnown RBP20.82■□□□□ 0.92
GCLC-201ENST00000229416 MTUS2Q5JR59 1369 aa20.81■□□□□ 0.92
GCLC-201ENST00000229416 DDX10Q13206 875 aaKnown RBP20.8■□□□□ 0.92
GCLC-201ENST00000229416 NESP48681 1621 aa20.75■□□□□ 0.91
GCLC-201ENST00000229416 SENP3-EIF4A1A0A087X0R7 540 aa20.73■□□□□ 0.91
GCLC-201ENST00000229416 VPS8Q8N3P4 1428 aa20.73■□□□□ 0.91
GCLC-201ENST00000229416 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
GCLC-201ENST00000229416 KCNH8Q96L42 1107 aa20.69■□□□□ 0.9
GCLC-201ENST00000229416 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
GCLC-201ENST00000229416 PLEKHG5O94827 1062 aa20.67■□□□□ 0.9
GCLC-201ENST00000229416 SALL2Q9Y467 1007 aaPredicted RBP20.66■□□□□ 0.9
GCLC-201ENST00000229416 FHOD3Q2V2M9 1422 aa20.64■□□□□ 0.9
GCLC-201ENST00000229416 PEG3Q9GZU2 1588 aa20.64■□□□□ 0.9
GCLC-201ENST00000229416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.63■□□□□ 0.894e-6■■□□□ 11.5
GCLC-201ENST00000229416 FOXD1Q16676 465 aa20.62■□□□□ 0.89
GCLC-201ENST00000229416 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
GCLC-201ENST00000229416 CFTRP13569 1480 aa20.61■□□□□ 0.89
GCLC-201ENST00000229416 TSHZ2Q9NRE2 1034 aa20.61■□□□□ 0.89
GCLC-201ENST00000229416 CUX1P39880 1505 aa20.61■□□□□ 0.89
GCLC-201ENST00000229416 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
GCLC-201ENST00000229416 IGF1RP08069 1367 aa20.61■□□□□ 0.89
GCLC-201ENST00000229416 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
GCLC-201ENST00000229416 PODXL2Q9NZ53 605 aa20.58■□□□□ 0.89
GCLC-201ENST00000229416 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
GCLC-201ENST00000229416 CCNB3Q8WWL7 1395 aa20.57■□□□□ 0.88
GCLC-201ENST00000229416 KDM2AQ9Y2K7 1162 aa20.56■□□□□ 0.88
GCLC-201ENST00000229416 CDK11AQ9UQ88 783 aaPredicted RBP20.55■□□□□ 0.88
GCLC-201ENST00000229416 TONSLQ96HA7 1378 aa20.53■□□□□ 0.88
GCLC-201ENST00000229416 NEFLP07196 543 aa20.53■□□□□ 0.88
GCLC-201ENST00000229416 NBR1Q14596 966 aa20.52■□□□□ 0.88
GCLC-201ENST00000229416 HMGXB3Q12766 1538 aa20.51■□□□□ 0.87
GCLC-201ENST00000229416 DEKP35659 375 aaKnown RBP20.51■□□□□ 0.87
GCLC-201ENST00000229416 TOP2BQ02880 1626 aa20.5■□□□□ 0.87
GCLC-201ENST00000229416 PKNOX2Q96KN3 472 aa20.49■□□□□ 0.87
GCLC-201ENST00000229416 SLC4A1APQ9BWU0 796 aaKnown RBP20.49■□□□□ 0.87
GCLC-201ENST00000229416 KIF21BO75037 1637 aa20.48■□□□□ 0.87
GCLC-201ENST00000229416 ANP32CO43423 234 aa20.46■□□□□ 0.87
GCLC-201ENST00000229416 RTL5Q5HYW3 569 aaPredicted RBP20.46■□□□□ 0.87
GCLC-201ENST00000229416 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
GCLC-201ENST00000229416 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
GCLC-201ENST00000229416 CFDP1Q9UEE9 299 aaPredicted RBP20.43■□□□□ 0.86
GCLC-201ENST00000229416 AQRO60306 1485 aaKnown RBP eCLIP20.42■□□□□ 0.86
GCLC-201ENST00000229416 PRXQ9BXM0 1461 aa20.41■□□□□ 0.86
GCLC-201ENST00000229416 RGL3Q3MIN7 710 aa20.41■□□□□ 0.86
GCLC-201ENST00000229416 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
GCLC-201ENST00000229416 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
GCLC-201ENST00000229416 PLEKHD1A6NEE1 506 aa20.38■□□□□ 0.85
GCLC-201ENST00000229416 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
GCLC-201ENST00000229416 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
GCLC-201ENST00000229416 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
GCLC-201ENST00000229416 UBE2Q2Q8WVN8 375 aa20.34■□□□□ 0.85
GCLC-201ENST00000229416 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
GCLC-201ENST00000229416 CHGAP10645 457 aaKnown RBP20.32■□□□□ 0.84
GCLC-201ENST00000229416 ARHGAP35Q9NRY4 1499 aa20.32■□□□□ 0.84
GCLC-201ENST00000229416 FHAD1B1AJZ9 1412 aa20.3■□□□□ 0.84
GCLC-201ENST00000229416 FKBP8Q14318 412 aa20.29■□□□□ 0.84
GCLC-201ENST00000229416 IRX6P78412 446 aaPredicted RBP20.29■□□□□ 0.84
GCLC-201ENST00000229416 ZNF644Q9H582 1327 aaPredicted RBP20.28■□□□□ 0.84
GCLC-201ENST00000229416 GLIPR1L2Q4G1C9 344 aa20.28■□□□□ 0.84
GCLC-201ENST00000229416 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
GCLC-201ENST00000229416 A0A0U1RQG5 324 aaPredicted RBP20.27■□□□□ 0.83
GCLC-201ENST00000229416 DAXXQ9UER7 740 aaPredicted RBP20.26■□□□□ 0.83
GCLC-201ENST00000229416 PHLDB1Q86UU1 1377 aa20.26■□□□□ 0.83
GCLC-201ENST00000229416 RBM19Q9Y4C8 960 aaKnown RBP20.25■□□□□ 0.83
GCLC-201ENST00000229416 JPH4Q96JJ6 628 aa20.25■□□□□ 0.83
GCLC-201ENST00000229416 HNRNPUQ00839 825 aaKnown RBP eCLIP20.24■□□□□ 0.831e-6■■■■□ 21
GCLC-201ENST00000229416 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
GCLC-201ENST00000229416 DHX57Q6P158 1386 aaKnown RBP20.24■□□□□ 0.83
GCLC-201ENST00000229416 SETD5Q9C0A6 1442 aa20.22■□□□□ 0.83
GCLC-201ENST00000229416 GAPVD1Q14C86 1478 aa20.22■□□□□ 0.83
GCLC-201ENST00000229416 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
GCLC-201ENST00000229416 HNRNPMP52272 730 aaKnown RBP eCLIP20.17■□□□□ 0.822e-6■■■□□ 18.4
GCLC-201ENST00000229416 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
GCLC-201ENST00000229416 NPM1P06748 294 aaKnown RBP eCLIP20.11■□□□□ 0.81
GCLC-201ENST00000229416 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
GCLC-201ENST00000229416 FMN1Q68DA7 1419 aa20.11■□□□□ 0.81
GCLC-201ENST00000229416 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
GCLC-201ENST00000229416 MPHOSPH9Q99550 1183 aa20.09■□□□□ 0.81
GCLC-201ENST00000229416 VSIG10Q8N0Z9 540 aa20.08■□□□□ 0.81
GCLC-201ENST00000229416 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
GCLC-201ENST00000229416 PKD2Q13563 968 aa20.07■□□□□ 0.8
GCLC-201ENST00000229416 MRS2Q9HD23 443 aa20.07■□□□□ 0.8
GCLC-201ENST00000229416 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
GCLC-201ENST00000229416 IL27Q8NEV9 243 aa20.04■□□□□ 0.8
GCLC-201ENST00000229416 PPP1R15AO75807 674 aaPredicted RBP20.04■□□□□ 0.8
GCLC-201ENST00000229416 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
GCLC-201ENST00000229416 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
GCLC-201ENST00000229416 HSPA5P11021 654 aaKnown RBP20.02■□□□□ 0.79
GCLC-201ENST00000229416 LRRC9Q6ZRR7 1453 aa20.01■□□□□ 0.79
GCLC-201ENST00000229416 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
GCLC-201ENST00000229416 ERICH6BQ5W0A0 696 aa19.98■□□□□ 0.79
GCLC-201ENST00000229416 CARD11Q9BXL7 1154 aa19.97■□□□□ 0.79
GCLC-201ENST00000229416 CLSPNQ9HAW4 1339 aa19.95■□□□□ 0.78
GCLC-201ENST00000229416 RRBP1Q9P2E9 1410 aaKnown RBP19.93■□□□□ 0.78
GCLC-201ENST00000229416 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
GCLC-201ENST00000229416 TMC1Q8TDI8 760 aa19.91■□□□□ 0.78
GCLC-201ENST00000229416 NUP155O75694 1391 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms