RNA–Protein interactions for RNA: ENST00000227525.7

TMEM109-201, Transcript of transmembrane protein 109, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM109, Length 2,413 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-201ENST00000227525 CLIP1P30622 1438 aa28.95■■■□□ 2.23
TMEM109-201ENST00000227525 RANGAP1P46060 587 aaPredicted RBP28.93■■■□□ 2.22
TMEM109-201ENST00000227525 CTTNBP2Q8WZ74 1663 aa28.89■■■□□ 2.21
TMEM109-201ENST00000227525 SYNJ2O15056 1496 aa28.86■■■□□ 2.21
TMEM109-201ENST00000227525 GRIN2AQ12879 1464 aa28.83■■■□□ 2.21
TMEM109-201ENST00000227525 CHMP7Q8WUX9 453 aaPredicted RBP28.81■■■□□ 2.2
TMEM109-201ENST00000227525 FBLN2P98095 1184 aa28.77■■■□□ 2.2
TMEM109-201ENST00000227525 ARHGAP35Q9NRY4 1499 aa28.75■■■□□ 2.19
TMEM109-201ENST00000227525 TTBK1Q5TCY1 1321 aaPredicted RBP28.72■■■□□ 2.19
TMEM109-201ENST00000227525 ARAP1Q96P48 1450 aa28.7■■■□□ 2.18
TMEM109-201ENST00000227525 IQGAP2Q13576 1575 aa28.67■■■□□ 2.18
TMEM109-201ENST00000227525 VPS8Q8N3P4 1428 aa28.66■■■□□ 2.18
TMEM109-201ENST00000227525 CEP170Q5SW79 1584 aa28.65■■■□□ 2.18
TMEM109-201ENST00000227525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.65■■■□□ 2.18
TMEM109-201ENST00000227525 KIAA0586Q9BVV6 1533 aa28.65■■■□□ 2.18
TMEM109-201ENST00000227525 EFCAB5A4FU69 1503 aa28.64■■■□□ 2.18
TMEM109-201ENST00000227525 NUP160Q12769 1436 aa28.63■■■□□ 2.17
TMEM109-201ENST00000227525 CHD1O14646 1710 aa28.62■■■□□ 2.17
TMEM109-201ENST00000227525 CCER1Q8TC90 406 aaPredicted RBP28.61■■■□□ 2.17
TMEM109-201ENST00000227525 SAMD9Q5K651 1589 aa28.57■■■□□ 2.16
TMEM109-201ENST00000227525 P3H3Q8IVL6 736 aa28.57■■■□□ 2.16
TMEM109-201ENST00000227525 FHOD3Q2V2M9 1422 aa28.53■■■□□ 2.16
TMEM109-201ENST00000227525 UGGT2Q9NYU1 1516 aa28.52■■■□□ 2.16
TMEM109-201ENST00000227525 APLP2Q06481 763 aa28.42■■■□□ 2.14
TMEM109-201ENST00000227525 JPH4Q96JJ6 628 aa28.4■■■□□ 2.14
TMEM109-201ENST00000227525 DISP1Q96F81 1524 aa28.4■■■□□ 2.14
TMEM109-201ENST00000227525 KIAA0556O60303 1618 aa28.39■■■□□ 2.13
TMEM109-201ENST00000227525 FMN1Q68DA7 1419 aa28.39■■■□□ 2.13
TMEM109-201ENST00000227525 PCF11O94913 1555 aaKnown RBP28.34■■■□□ 2.13
TMEM109-201ENST00000227525 CARMIL2Q6F5E8 1435 aa28.3■■■□□ 2.12
TMEM109-201ENST00000227525 CASKIN1Q8WXD9 1431 aa28.29■■■□□ 2.12
TMEM109-201ENST00000227525 CLASP1Q7Z460 1538 aa28.28■■■□□ 2.12
TMEM109-201ENST00000227525 FYCO1Q9BQS8 1478 aa28.28■■■□□ 2.12
TMEM109-201ENST00000227525 SHROOM2Q13796 1616 aa28.26■■■□□ 2.11
TMEM109-201ENST00000227525 PRG4Q92954 1404 aaPredicted RBP28.24■■■□□ 2.11
TMEM109-201ENST00000227525 ATP1B4Q9UN42 357 aaPredicted RBP28.24■■■□□ 2.11
TMEM109-201ENST00000227525 SCAF1Q9H7N4 1312 aaKnown RBP28.23■■■□□ 2.11
TMEM109-201ENST00000227525 MAP3K1Q13233 1512 aa28.19■■■□□ 2.1
TMEM109-201ENST00000227525 HNRNPUL2Q1KMD3 747 aaKnown RBP28.19■■■□□ 2.1
TMEM109-201ENST00000227525 TIAM1Q13009 1591 aa28.18■■■□□ 2.1
TMEM109-201ENST00000227525 PELP1Q8IZL8 1130 aaKnown RBP28.18■■■□□ 2.1
TMEM109-201ENST00000227525 KANK4Q5T7N3 995 aaPredicted RBP28.15■■■□□ 2.1
TMEM109-201ENST00000227525 CFAP43Q8NDM7 1665 aa28.14■■■□□ 2.1
TMEM109-201ENST00000227525 OSCARQ8IYS5 282 aa28.13■■■□□ 2.09
TMEM109-201ENST00000227525 HECW1Q76N89 1606 aa28.12■■■□□ 2.09
TMEM109-201ENST00000227525 LRRIQ1Q96JM4 1722 aa28.1■■■□□ 2.09
TMEM109-201ENST00000227525 ERCC6L2Q5T890 1561 aa28.09■■■□□ 2.09
TMEM109-201ENST00000227525 RAPGEF6Q8TEU7 1601 aa28.08■■■□□ 2.09
TMEM109-201ENST00000227525 LRRC9Q6ZRR7 1453 aa28.05■■■□□ 2.08
TMEM109-201ENST00000227525 PLB1Q6P1J6 1458 aa28.05■■■□□ 2.08
TMEM109-201ENST00000227525 PTPRGP23470 1445 aa28.04■■■□□ 2.08
TMEM109-201ENST00000227525 CCDC18Q5T9S5 1454 aa28.04■■■□□ 2.08
TMEM109-201ENST00000227525 EPRSP07814 1512 aaKnown RBP28.02■■■□□ 2.08
TMEM109-201ENST00000227525 NUP153P49790 1475 aaKnown RBP28.01■■■□□ 2.07
TMEM109-201ENST00000227525 ABCA8O94911 1581 aa27.98■■■□□ 2.07
TMEM109-201ENST00000227525 CDK13Q14004 1512 aaKnown RBP27.96■■■□□ 2.07
TMEM109-201ENST00000227525 ARID3CA6NKF2 412 aa27.95■■■□□ 2.06
TMEM109-201ENST00000227525 MTUS2Q5JR59 1369 aa27.92■■■□□ 2.06
TMEM109-201ENST00000227525 RRBP1Q9P2E9 1410 aaKnown RBP27.88■■■□□ 2.05
TMEM109-201ENST00000227525 UACAQ9BZF9 1416 aa27.88■■■□□ 2.05
TMEM109-201ENST00000227525 DIEXFQ68CQ4 756 aaKnown RBP27.88■■■□□ 2.05
TMEM109-201ENST00000227525 MAGI3Q5TCQ9 1506 aa27.87■■■□□ 2.05
TMEM109-201ENST00000227525 EHBP1L1Q8N3D4 1523 aa27.87■■■□□ 2.05
TMEM109-201ENST00000227525 ZNF316A6NFI3 1004 aaPredicted RBP27.81■■■□□ 2.04
TMEM109-201ENST00000227525 ACIN1Q9UKV3 1341 aaKnown RBP27.8■■■□□ 2.04
TMEM109-201ENST00000227525 ATP10BO94823 1461 aa27.8■■■□□ 2.04
TMEM109-201ENST00000227525 ABCC2Q92887 1545 aa27.8■■■□□ 2.04
TMEM109-201ENST00000227525 CDK11AQ9UQ88 783 aaPredicted RBP27.8■■■□□ 2.04
TMEM109-201ENST00000227525 SUPT6HQ7KZ85 1726 aaKnown RBP27.79■■■□□ 2.04
TMEM109-201ENST00000227525 PHLDB1Q86UU1 1377 aa27.79■■■□□ 2.04
TMEM109-201ENST00000227525 CCNB3Q8WWL7 1395 aa27.76■■■□□ 2.03
TMEM109-201ENST00000227525 NCOA2Q15596 1464 aa27.76■■■□□ 2.03
TMEM109-201ENST00000227525 UHRF1BP1LA0JNW5 1464 aa27.74■■■□□ 2.03
TMEM109-201ENST00000227525 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
TMEM109-201ENST00000227525 CLSPNQ9HAW4 1339 aa27.73■■■□□ 2.03
TMEM109-201ENST00000227525 TROQ12816 1431 aaPredicted RBP27.7■■■□□ 2.03
TMEM109-201ENST00000227525 ARHGEF11O15085 1522 aa27.7■■■□□ 2.03
TMEM109-201ENST00000227525 DHX57Q6P158 1386 aaKnown RBP27.69■■■□□ 2.02
TMEM109-201ENST00000227525 PLEKHD1A6NEE1 506 aa27.67■■■□□ 2.02
TMEM109-201ENST00000227525 ADCY10Q96PN6 1610 aa27.64■■■□□ 2.02
TMEM109-201ENST00000227525 KDM5BQ9UGL1 1544 aa27.64■■■□□ 2.01
TMEM109-201ENST00000227525 MYOM3Q5VTT5 1437 aa27.63■■■□□ 2.01
TMEM109-201ENST00000227525 ZCCHC11Q5TAX3 1644 aaKnown RBP27.61■■■□□ 2.01
TMEM109-201ENST00000227525 FGD6Q6ZV73 1430 aa27.6■■■□□ 2.01
TMEM109-201ENST00000227525 KIF14Q15058 1648 aa27.59■■■□□ 2.01
TMEM109-201ENST00000227525 CENPBP07199 599 aaPredicted RBP27.57■■■□□ 2
TMEM109-201ENST00000227525 RIMBP3CA6NJZ7 1639 aa27.54■■■□□ 2
TMEM109-201ENST00000227525 RIMBP3BA6NNM3 1639 aa27.54■■■□□ 2
TMEM109-201ENST00000227525 RIMBP3Q9UFD9 1639 aa27.54■■■□□ 2
TMEM109-201ENST00000227525 FAM50AQ14320 339 aaKnown RBP27.54■■■□□ 2
TMEM109-201ENST00000227525 ITGAEP38570 1179 aa27.53■■■□□ 2
TMEM109-201ENST00000227525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.51■■□□□ 1.99
TMEM109-201ENST00000227525 GTF3C3Q9Y5Q9 886 aa27.5■■□□□ 1.99
TMEM109-201ENST00000227525 MIA2Q96PC5 1412 aa27.49■■□□□ 1.99
TMEM109-201ENST00000227525 PTPN23Q9H3S7 1636 aa27.48■■□□□ 1.99
TMEM109-201ENST00000227525 ABCC10Q5T3U5 1492 aa27.48■■□□□ 1.99
TMEM109-201ENST00000227525 ITSN2Q9NZM3 1697 aa27.45■■□□□ 1.98
TMEM109-201ENST00000227525 GPATCH8Q9UKJ3 1502 aaKnown RBP27.45■■□□□ 1.98
TMEM109-201ENST00000227525 TCOF1Q13428 1488 aaKnown RBP27.43■■□□□ 1.98
TMEM109-201ENST00000227525 NPM1P06748 294 aaKnown RBP eCLIP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms