RNA–Protein interactions for RNA: ENST00000227157.8

LDHA-201, Transcript of lactate dehydrogenase A, humanhuman

TSL 3 BASIC

Gene LDHA, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-201ENST00000227157 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
LDHA-201ENST00000227157 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
LDHA-201ENST00000227157 PRXQ9BXM0 1461 aa13.34□□□□□ -0.27
LDHA-201ENST00000227157 NUP160Q12769 1436 aa13.33□□□□□ -0.28
LDHA-201ENST00000227157 EEA1Q15075 1411 aa13.33□□□□□ -0.28
LDHA-201ENST00000227157 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
LDHA-201ENST00000227157 ERCC6L2Q5T890 1561 aa13.31□□□□□ -0.28
LDHA-201ENST00000227157 CTTNBP2Q8WZ74 1663 aa13.3□□□□□ -0.28
LDHA-201ENST00000227157 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
LDHA-201ENST00000227157 RANGAP1P46060 587 aaPredicted RBP13.29□□□□□ -0.28
LDHA-201ENST00000227157 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
LDHA-201ENST00000227157 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
LDHA-201ENST00000227157 KIF21BO75037 1637 aa13.28□□□□□ -0.28
LDHA-201ENST00000227157 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
LDHA-201ENST00000227157 ARHGEF11O15085 1522 aa13.27□□□□□ -0.29
LDHA-201ENST00000227157 IQGAP2Q13576 1575 aa13.25□□□□□ -0.29
LDHA-201ENST00000227157 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
LDHA-201ENST00000227157 KIAA0586Q9BVV6 1533 aa13.24□□□□□ -0.29
LDHA-201ENST00000227157 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
LDHA-201ENST00000227157 JPH4Q96JJ6 628 aa13.23□□□□□ -0.29
LDHA-201ENST00000227157 LOC105371045A0A1W2PR82 267 aa13.22□□□□□ -0.29
LDHA-201ENST00000227157 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.29
LDHA-201ENST00000227157 GOLGA3Q08378 1498 aa13.21□□□□□ -0.29
LDHA-201ENST00000227157 CYB5RLQ6IPT4 315 aa13.18□□□□□ -0.3
LDHA-201ENST00000227157 P3H3Q8IVL6 736 aa13.18□□□□□ -0.3
LDHA-201ENST00000227157 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
LDHA-201ENST00000227157 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
LDHA-201ENST00000227157 KIAA0556O60303 1618 aa13.14□□□□□ -0.31
LDHA-201ENST00000227157 UGGT2Q9NYU1 1516 aa13.13□□□□□ -0.31
LDHA-201ENST00000227157 SAMD9Q5K651 1589 aa13.08□□□□□ -0.31
LDHA-201ENST00000227157 FHOD3Q2V2M9 1422 aa13.08□□□□□ -0.32
LDHA-201ENST00000227157 CARMIL2Q6F5E8 1435 aa13.08□□□□□ -0.32
LDHA-201ENST00000227157 PTPRGP23470 1445 aa13.05□□□□□ -0.32
LDHA-201ENST00000227157 TNIKQ9UKE5 1360 aa13.05□□□□□ -0.32
LDHA-201ENST00000227157 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
LDHA-201ENST00000227157 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
LDHA-201ENST00000227157 FOXD1Q16676 465 aa13.04□□□□□ -0.32
LDHA-201ENST00000227157 ADCY10Q96PN6 1610 aa13.03□□□□□ -0.32
LDHA-201ENST00000227157 PLB1Q6P1J6 1458 aa13.03□□□□□ -0.32
LDHA-201ENST00000227157 CLIP1P30622 1438 aa13.01□□□□□ -0.33
LDHA-201ENST00000227157 CEP162Q5TB80 1403 aa13□□□□□ -0.33
LDHA-201ENST00000227157 EFCAB5A4FU69 1503 aa13□□□□□ -0.33
LDHA-201ENST00000227157 ATP1B4Q9UN42 357 aaPredicted RBP12.96□□□□□ -0.33
LDHA-201ENST00000227157 UACAQ9BZF9 1416 aa12.95□□□□□ -0.34
LDHA-201ENST00000227157 ABCA8O94911 1581 aa12.95□□□□□ -0.34
LDHA-201ENST00000227157 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
LDHA-201ENST00000227157 ABCC2Q92887 1545 aa12.94□□□□□ -0.34
LDHA-201ENST00000227157 LRRIQ1Q96JM4 1722 aa12.94□□□□□ -0.34
LDHA-201ENST00000227157 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
LDHA-201ENST00000227157 PCF11O94913 1555 aaKnown RBP12.92□□□□□ -0.34
LDHA-201ENST00000227157 NUP153P49790 1475 aaKnown RBP12.9□□□□□ -0.34
LDHA-201ENST00000227157 CDK13Q14004 1512 aaKnown RBP12.89□□□□□ -0.35
LDHA-201ENST00000227157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.89□□□□□ -0.35
LDHA-201ENST00000227157 HNRNPUL2Q1KMD3 747 aaKnown RBP12.89□□□□□ -0.35
LDHA-201ENST00000227157 UHRF1BP1LA0JNW5 1464 aa12.88□□□□□ -0.35
LDHA-201ENST00000227157 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
LDHA-201ENST00000227157 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
LDHA-201ENST00000227157 KDM5BQ9UGL1 1544 aa12.86□□□□□ -0.35
LDHA-201ENST00000227157 TRHP20396 242 aaPredicted RBP12.86□□□□□ -0.35
LDHA-201ENST00000227157 ATP10BO94823 1461 aa12.86□□□□□ -0.35
LDHA-201ENST00000227157 HECW1Q76N89 1606 aa12.85□□□□□ -0.35
LDHA-201ENST00000227157 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
LDHA-201ENST00000227157 ASXL2Q76L83 1435 aa12.84□□□□□ -0.35
LDHA-201ENST00000227157 TSPOAP1O95153 1857 aa12.83□□□□□ -0.36
LDHA-201ENST00000227157 MAPKBP1O60336 1514 aa12.82□□□□□ -0.36
LDHA-201ENST00000227157 EPRSP07814 1512 aaKnown RBP12.82□□□□□ -0.36
LDHA-201ENST00000227157 KCNH8Q96L42 1107 aa12.82□□□□□ -0.36
LDHA-201ENST00000227157 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
LDHA-201ENST00000227157 FYCO1Q9BQS8 1478 aa12.8□□□□□ -0.36
LDHA-201ENST00000227157 VPS8Q8N3P4 1428 aa12.8□□□□□ -0.36
LDHA-201ENST00000227157 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
LDHA-201ENST00000227157 MAGI3Q5TCQ9 1506 aa12.78□□□□□ -0.36
LDHA-201ENST00000227157 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
LDHA-201ENST00000227157 FAM69CQ0P6D2 419 aa12.78□□□□□ -0.36
LDHA-201ENST00000227157 MSH5O43196 834 aa12.76□□□□□ -0.37
LDHA-201ENST00000227157 ABCC10Q5T3U5 1492 aa12.76□□□□□ -0.37
LDHA-201ENST00000227157 KIF14Q15058 1648 aa12.75□□□□□ -0.37
LDHA-201ENST00000227157 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
LDHA-201ENST00000227157 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
LDHA-201ENST00000227157 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
LDHA-201ENST00000227157 CCDC18Q5T9S5 1454 aa12.73□□□□□ -0.37
LDHA-201ENST00000227157 TTC37Q6PGP7 1564 aa12.72□□□□□ -0.37
LDHA-201ENST00000227157 TIAM1Q13009 1591 aa12.71□□□□□ -0.37
LDHA-201ENST00000227157 KANK4Q5T7N3 995 aaPredicted RBP12.7□□□□□ -0.38
LDHA-201ENST00000227157 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
LDHA-201ENST00000227157 PPRC1Q5VV67 1664 aaKnown RBP12.7□□□□□ -0.38
LDHA-201ENST00000227157 MAP3K4Q9Y6R4 1608 aa12.7□□□□□ -0.38
LDHA-201ENST00000227157 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.69□□□□□ -0.383e-20■■□□□ 13.2
LDHA-201ENST00000227157 TROQ12816 1431 aaPredicted RBP12.67□□□□□ -0.38
LDHA-201ENST00000227157 GLI2P10070 1586 aa12.67□□□□□ -0.38
LDHA-201ENST00000227157 ABCA9Q8IUA7 1624 aa12.67□□□□□ -0.38
LDHA-201ENST00000227157 MTUS2Q5JR59 1369 aa12.67□□□□□ -0.38
LDHA-201ENST00000227157 CDK11AQ9UQ88 783 aaPredicted RBP12.66□□□□□ -0.38
LDHA-201ENST00000227157 CD109Q6YHK3 1445 aa12.65□□□□□ -0.38
LDHA-201ENST00000227157 APLP2Q06481 763 aa12.64□□□□□ -0.39
LDHA-201ENST00000227157 MYO5CQ9NQX4 1742 aa12.64□□□□□ -0.39
LDHA-201ENST00000227157 LRRC9Q6ZRR7 1453 aa12.64□□□□□ -0.39
LDHA-201ENST00000227157 CDC42BPAQ5VT25 1732 aa12.64□□□□□ -0.39
LDHA-201ENST00000227157 EHBP1L1Q8N3D4 1523 aa12.63□□□□□ -0.39
LDHA-201ENST00000227157 CDC42BPBQ9Y5S2 1711 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms