RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LRRC9Q6ZRR7 1453 aa32.48■■■□□ 2.79
SMARCD2-201ENST00000225742 CTTNBP2Q8WZ74 1663 aa32.47■■■□□ 2.79
SMARCD2-201ENST00000225742 URB2Q14146 1524 aaKnown RBP32.45■■■□□ 2.79
SMARCD2-201ENST00000225742 AQRO60306 1485 aaKnown RBP eCLIP32.43■■■□□ 2.783e-8■■■■□ 23.4
SMARCD2-201ENST00000225742 PDS5BQ9NTI5 1447 aa32.42■■■□□ 2.78
SMARCD2-201ENST00000225742 SCAF1Q9H7N4 1312 aaKnown RBP32.42■■■□□ 2.78
SMARCD2-201ENST00000225742 ACIN1Q9UKV3 1341 aaKnown RBP32.4■■■□□ 2.78
SMARCD2-201ENST00000225742 PCF11O94913 1555 aaKnown RBP32.4■■■□□ 2.78
SMARCD2-201ENST00000225742 CENPBP07199 599 aaPredicted RBP32.39■■■□□ 2.78
SMARCD2-201ENST00000225742 FYCO1Q9BQS8 1478 aa32.39■■■□□ 2.78
SMARCD2-201ENST00000225742 ABCA5Q8WWZ7 1642 aa32.38■■■□□ 2.77
SMARCD2-201ENST00000225742 CASKIN1Q8WXD9 1431 aa32.34■■■□□ 2.77
SMARCD2-201ENST00000225742 FHOD3Q2V2M9 1422 aa32.27■■■□□ 2.76
SMARCD2-201ENST00000225742 FMN1Q68DA7 1419 aa32.25■■■□□ 2.75
SMARCD2-201ENST00000225742 GAPVD1Q14C86 1478 aa32.25■■■□□ 2.75
SMARCD2-201ENST00000225742 PHLDB1Q86UU1 1377 aa32.24■■■□□ 2.75
SMARCD2-201ENST00000225742 NEUROD1Q13562 356 aa32.21■■■□□ 2.75
SMARCD2-201ENST00000225742 KIF21AQ7Z4S6 1674 aa32.21■■■□□ 2.75
SMARCD2-201ENST00000225742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.2■■■□□ 2.759e-6■□□□□ 9.6
SMARCD2-201ENST00000225742 SAMD9Q5K651 1589 aa32.2■■■□□ 2.74
SMARCD2-201ENST00000225742 SETD5Q9C0A6 1442 aa32.18■■■□□ 2.74
SMARCD2-201ENST00000225742 P3H3Q8IVL6 736 aa32.17■■■□□ 2.74
SMARCD2-201ENST00000225742 RAB3GAP2Q9H2M9 1393 aa32.17■■■□□ 2.74
SMARCD2-201ENST00000225742 TDRD9Q8NDG6 1382 aaKnown RBP32.14■■■□□ 2.74
SMARCD2-201ENST00000225742 TARBP1Q13395 1621 aaKnown RBP32.13■■■□□ 2.73
SMARCD2-201ENST00000225742 SNAPC4Q5SXM2 1469 aa32.12■■■□□ 2.73
SMARCD2-201ENST00000225742 ITGAEP38570 1179 aa32.1■■■□□ 2.73
SMARCD2-201ENST00000225742 THOC2Q8NI27 1593 aaKnown RBP32.09■■■□□ 2.73
SMARCD2-201ENST00000225742 MIER1Q8N108 512 aa32.06■■■□□ 2.72
SMARCD2-201ENST00000225742 MAPKBP1O60336 1514 aa32.04■■■□□ 2.72
SMARCD2-201ENST00000225742 ATP1B4Q9UN42 357 aaPredicted RBP32.03■■■□□ 2.72
SMARCD2-201ENST00000225742 FAM50AQ14320 339 aaKnown RBP32■■■□□ 2.71
SMARCD2-201ENST00000225742 GRIN2BQ13224 1484 aa31.98■■■□□ 2.71
SMARCD2-201ENST00000225742 PBRM1Q86U86 1689 aa31.98■■■□□ 2.71
SMARCD2-201ENST00000225742 FGD6Q6ZV73 1430 aa31.94■■■□□ 2.7
SMARCD2-201ENST00000225742 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
SMARCD2-201ENST00000225742 DNAJC5BQ9UF47 199 aa31.93■■■□□ 2.7
SMARCD2-201ENST00000225742 MTUS2Q5JR59 1369 aa31.91■■■□□ 2.7
SMARCD2-201ENST00000225742 LRRIQ1Q96JM4 1722 aa31.9■■■□□ 2.7
SMARCD2-201ENST00000225742 EHBP1L1Q8N3D4 1523 aa31.88■■■□□ 2.69
SMARCD2-201ENST00000225742 TIMELESSQ9UNS1 1208 aa31.88■■■□□ 2.69
SMARCD2-201ENST00000225742 ADAMTS12P58397 1594 aa31.87■■■□□ 2.69
SMARCD2-201ENST00000225742 PELP1Q8IZL8 1130 aaKnown RBP31.86■■■□□ 2.69
SMARCD2-201ENST00000225742 GTF3C3Q9Y5Q9 886 aa31.86■■■□□ 2.69
SMARCD2-201ENST00000225742 SUPT6HQ7KZ85 1726 aaKnown RBP31.86■■■□□ 2.69
SMARCD2-201ENST00000225742 CCDC18Q5T9S5 1454 aa31.85■■■□□ 2.69
SMARCD2-201ENST00000225742 IQGAP2Q13576 1575 aa31.81■■■□□ 2.68
SMARCD2-201ENST00000225742 NCOA2Q15596 1464 aa31.8■■■□□ 2.68
SMARCD2-201ENST00000225742 MYOM3Q5VTT5 1437 aa31.79■■■□□ 2.68
SMARCD2-201ENST00000225742 HECW1Q76N89 1606 aa31.78■■■□□ 2.68
SMARCD2-201ENST00000225742 IFT140Q96RY7 1462 aa31.75■■■□□ 2.67
SMARCD2-201ENST00000225742 ARHGEF11O15085 1522 aa31.75■■■□□ 2.67
SMARCD2-201ENST00000225742 UGGT2Q9NYU1 1516 aa31.73■■■□□ 2.67
SMARCD2-201ENST00000225742 YTHDC1Q96MU7 727 aaKnown RBP31.73■■■□□ 2.67
SMARCD2-201ENST00000225742 HFM1A2PYH4 1435 aa31.73■■■□□ 2.67
SMARCD2-201ENST00000225742 WDR62O43379 1518 aa31.71■■■□□ 2.67
SMARCD2-201ENST00000225742 PTPN23Q9H3S7 1636 aa31.67■■■□□ 2.66
SMARCD2-201ENST00000225742 TCOF1Q13428 1488 aaKnown RBP31.63■■■□□ 2.65
SMARCD2-201ENST00000225742 UACAQ9BZF9 1416 aa31.63■■■□□ 2.65
SMARCD2-201ENST00000225742 MAGI3Q5TCQ9 1506 aa31.61■■■□□ 2.65
SMARCD2-201ENST00000225742 PTPRKQ15262 1439 aa31.61■■■□□ 2.65
SMARCD2-201ENST00000225742 EPRSP07814 1512 aaKnown RBP31.6■■■□□ 2.65
SMARCD2-201ENST00000225742 SIN3AQ96ST3 1273 aa31.59■■■□□ 2.65
SMARCD2-201ENST00000225742 NAIPQ13075 1403 aa31.57■■■□□ 2.64
SMARCD2-201ENST00000225742 KIAA0586Q9BVV6 1533 aa31.55■■■□□ 2.64
SMARCD2-201ENST00000225742 AKNAQ7Z591 1439 aa31.53■■■□□ 2.64
SMARCD2-201ENST00000225742 MIA2Q96PC5 1412 aa31.53■■■□□ 2.64
SMARCD2-201ENST00000225742 PPP1R15AO75807 674 aaPredicted RBP31.51■■■□□ 2.63
SMARCD2-201ENST00000225742 ZNF608Q9ULD9 1512 aaPredicted RBP31.51■■■□□ 2.63
SMARCD2-201ENST00000225742 GCC2Q8IWJ2 1684 aa31.49■■■□□ 2.63
SMARCD2-201ENST00000225742 KIAA0556O60303 1618 aa31.47■■■□□ 2.63
SMARCD2-201ENST00000225742 EIF4G3O43432 1585 aaKnown RBP31.43■■■□□ 2.62
SMARCD2-201ENST00000225742 GRIN2AQ12879 1464 aa31.42■■■□□ 2.62
SMARCD2-201ENST00000225742 CDK13Q14004 1512 aaKnown RBP31.42■■■□□ 2.62
SMARCD2-201ENST00000225742 DISP1Q96F81 1524 aa31.41■■■□□ 2.62
SMARCD2-201ENST00000225742 TONSLQ96HA7 1378 aa31.41■■■□□ 2.62
SMARCD2-201ENST00000225742 MAGI1Q96QZ7 1491 aaPredicted RBP31.38■■■□□ 2.61
SMARCD2-201ENST00000225742 RAPGEF6Q8TEU7 1601 aa31.34■■■□□ 2.61
SMARCD2-201ENST00000225742 ERCC6Q03468 1493 aa31.29■■■□□ 2.6
SMARCD2-201ENST00000225742 NUP153P49790 1475 aaKnown RBP31.28■■■□□ 2.6
SMARCD2-201ENST00000225742 ROCK1Q13464 1354 aa31.26■■■□□ 2.59
SMARCD2-201ENST00000225742 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
SMARCD2-201ENST00000225742 CDK11AQ9UQ88 783 aaPredicted RBP31.25■■■□□ 2.59
SMARCD2-201ENST00000225742 RRP7BPQ9NSQ0 103 aa31.21■■■□□ 2.59
SMARCD2-201ENST00000225742 DNMT1P26358 1616 aaKnown RBP31.21■■■□□ 2.59
SMARCD2-201ENST00000225742 DDX10Q13206 875 aaKnown RBP31.2■■■□□ 2.59
SMARCD2-201ENST00000225742 KDM5BQ9UGL1 1544 aa31.2■■■□□ 2.58
SMARCD2-201ENST00000225742 DAPK1P53355 1430 aa31.18■■■□□ 2.58
SMARCD2-201ENST00000225742 CEP170Q5SW79 1584 aa31.18■■■□□ 2.58
SMARCD2-201ENST00000225742 CHIC2Q9UKJ5 165 aa31.16■■■□□ 2.58
SMARCD2-201ENST00000225742 KDM6BO15054 1643 aa31.15■■■□□ 2.58
SMARCD2-201ENST00000225742 DENND4BO75064 1496 aaPredicted RBP31.14■■■□□ 2.58
SMARCD2-201ENST00000225742 TROQ12816 1431 aaPredicted RBP31.13■■■□□ 2.57
SMARCD2-201ENST00000225742 CHMP7Q8WUX9 453 aaPredicted RBP31.12■■■□□ 2.57
SMARCD2-201ENST00000225742 NUP160Q12769 1436 aa31.12■■■□□ 2.57
SMARCD2-201ENST00000225742 ITSN2Q9NZM3 1697 aa31.12■■■□□ 2.57
SMARCD2-201ENST00000225742 ADCY10Q96PN6 1610 aa31.11■■■□□ 2.57
SMARCD2-201ENST00000225742 CARMIL2Q6F5E8 1435 aa31.11■■■□□ 2.57
SMARCD2-201ENST00000225742 CCER2I3L3R5 266 aa31.11■■■□□ 2.57
SMARCD2-201ENST00000225742 ABCC5O15440 1437 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms