RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 CTTNBP2Q8WZ74 1663 aa22.13■■□□□ 1.13
TRMT1-201ENST00000221504 EFCAB5A4FU69 1503 aa22.12■■□□□ 1.13
TRMT1-201ENST00000221504 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
TRMT1-201ENST00000221504 PCF11O94913 1555 aaKnown RBP22.11■■□□□ 1.13
TRMT1-201ENST00000221504 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
TRMT1-201ENST00000221504 LRRC9Q6ZRR7 1453 aa22.11■■□□□ 1.13
TRMT1-201ENST00000221504 ABCA5Q8WWZ7 1642 aa22.1■■□□□ 1.13
TRMT1-201ENST00000221504 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
TRMT1-201ENST00000221504 FHOD3Q2V2M9 1422 aa22.06■■□□□ 1.12
TRMT1-201ENST00000221504 P3H3Q8IVL6 736 aa22.04■■□□□ 1.12
TRMT1-201ENST00000221504 FYCO1Q9BQS8 1478 aa22.04■■□□□ 1.12
TRMT1-201ENST00000221504 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
TRMT1-201ENST00000221504 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
TRMT1-201ENST00000221504 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.124e-12■■■□□ 18.2
TRMT1-201ENST00000221504 CASKIN1Q8WXD9 1431 aa22■■□□□ 1.11
TRMT1-201ENST00000221504 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
TRMT1-201ENST00000221504 TARBP1Q13395 1621 aaKnown RBP21.96■■□□□ 1.11
TRMT1-201ENST00000221504 SCAF1Q9H7N4 1312 aaKnown RBP21.95■■□□□ 1.11
TRMT1-201ENST00000221504 ITGAEP38570 1179 aa21.95■■□□□ 1.1
TRMT1-201ENST00000221504 FMN1Q68DA7 1419 aa21.95■■□□□ 1.1
TRMT1-201ENST00000221504 SAMD9Q5K651 1589 aa21.93■■□□□ 1.1
TRMT1-201ENST00000221504 ATP1B4Q9UN42 357 aaPredicted RBP21.92■■□□□ 1.1
TRMT1-201ENST00000221504 RAB3GAP2Q9H2M9 1393 aa21.91■■□□□ 1.1
TRMT1-201ENST00000221504 SNAPC4Q5SXM2 1469 aa21.91■■□□□ 1.1
TRMT1-201ENST00000221504 ACIN1Q9UKV3 1341 aaKnown RBP21.89■■□□□ 1.1
TRMT1-201ENST00000221504 SETD5Q9C0A6 1442 aa21.86■■□□□ 1.09
TRMT1-201ENST00000221504 CENPBP07199 599 aaPredicted RBP21.85■■□□□ 1.09
TRMT1-201ENST00000221504 PBRM1Q86U86 1689 aa21.84■■□□□ 1.09
TRMT1-201ENST00000221504 NEUROD1Q13562 356 aa21.84■■□□□ 1.09
TRMT1-201ENST00000221504 FAM50AQ14320 339 aaKnown RBP21.84■■□□□ 1.09
TRMT1-201ENST00000221504 DNAJC5Q9H3Z4 198 aa21.84■■□□□ 1.09
TRMT1-201ENST00000221504 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
TRMT1-201ENST00000221504 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRMT1-201ENST00000221504 MAPKBP1O60336 1514 aa21.81■■□□□ 1.08
TRMT1-201ENST00000221504 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
TRMT1-201ENST00000221504 LRRIQ1Q96JM4 1722 aa21.79■■□□□ 1.08
TRMT1-201ENST00000221504 GRIN2BQ13224 1484 aa21.79■■□□□ 1.08
TRMT1-201ENST00000221504 MIER1Q8N108 512 aa21.77■■□□□ 1.08
TRMT1-201ENST00000221504 ADAMTS12P58397 1594 aa21.76■■□□□ 1.07
TRMT1-201ENST00000221504 MTUS2Q5JR59 1369 aa21.75■■□□□ 1.07
TRMT1-201ENST00000221504 FGD6Q6ZV73 1430 aa21.75■■□□□ 1.07
TRMT1-201ENST00000221504 IQGAP2Q13576 1575 aa21.71■■□□□ 1.07
TRMT1-201ENST00000221504 EHBP1L1Q8N3D4 1523 aa21.69■■□□□ 1.06
TRMT1-201ENST00000221504 SUPT6HQ7KZ85 1726 aaKnown RBP21.68■■□□□ 1.06
TRMT1-201ENST00000221504 NCOA2Q15596 1464 aa21.67■■□□□ 1.06
TRMT1-201ENST00000221504 WDR62O43379 1518 aa21.67■■□□□ 1.06
TRMT1-201ENST00000221504 IFT140Q96RY7 1462 aa21.67■■□□□ 1.06
TRMT1-201ENST00000221504 CCDC18Q5T9S5 1454 aa21.66■■□□□ 1.06
TRMT1-201ENST00000221504 MYOM3Q5VTT5 1437 aa21.65■■□□□ 1.06
TRMT1-201ENST00000221504 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
TRMT1-201ENST00000221504 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
TRMT1-201ENST00000221504 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
TRMT1-201ENST00000221504 UGGT2Q9NYU1 1516 aa21.61■■□□□ 1.05
TRMT1-201ENST00000221504 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
TRMT1-201ENST00000221504 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
TRMT1-201ENST00000221504 MAGI3Q5TCQ9 1506 aa21.6■■□□□ 1.05
TRMT1-201ENST00000221504 GTF3C3Q9Y5Q9 886 aa21.58■■□□□ 1.05
TRMT1-201ENST00000221504 HFM1A2PYH4 1435 aa21.58■■□□□ 1.04
TRMT1-201ENST00000221504 PTPRKQ15262 1439 aa21.58■■□□□ 1.04
TRMT1-201ENST00000221504 PTPN23Q9H3S7 1636 aa21.56■■□□□ 1.04
TRMT1-201ENST00000221504 EPRSP07814 1512 aaKnown RBP21.55■■□□□ 1.04
TRMT1-201ENST00000221504 SIN3AQ96ST3 1273 aa21.55■■□□□ 1.04
TRMT1-201ENST00000221504 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
TRMT1-201ENST00000221504 EIF4G3O43432 1585 aaKnown RBP21.52■■□□□ 1.04
TRMT1-201ENST00000221504 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
TRMT1-201ENST00000221504 KIAA0586Q9BVV6 1533 aa21.51■■□□□ 1.03
TRMT1-201ENST00000221504 NAIPQ13075 1403 aa21.5■■□□□ 1.03
TRMT1-201ENST00000221504 TCOF1Q13428 1488 aaKnown RBP21.5■■□□□ 1.03
TRMT1-201ENST00000221504 CDK13Q14004 1512 aaKnown RBP21.49■■□□□ 1.03
TRMT1-201ENST00000221504 UACAQ9BZF9 1416 aa21.49■■□□□ 1.03
TRMT1-201ENST00000221504 KIAA0556O60303 1618 aa21.48■■□□□ 1.03
TRMT1-201ENST00000221504 GRIN2AQ12879 1464 aa21.47■■□□□ 1.03
TRMT1-201ENST00000221504 DISP1Q96F81 1524 aa21.46■■□□□ 1.03
TRMT1-201ENST00000221504 MIA2Q96PC5 1412 aa21.42■■□□□ 1.02
TRMT1-201ENST00000221504 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
TRMT1-201ENST00000221504 GCC2Q8IWJ2 1684 aa21.41■■□□□ 1.02
TRMT1-201ENST00000221504 PPP1R15AO75807 674 aaPredicted RBP21.39■■□□□ 1.01
TRMT1-201ENST00000221504 AKNAQ7Z591 1439 aa21.38■■□□□ 1.01
TRMT1-201ENST00000221504 RAPGEF6Q8TEU7 1601 aa21.37■■□□□ 1.01
TRMT1-201ENST00000221504 NUP153P49790 1475 aaKnown RBP21.36■■□□□ 1.01
TRMT1-201ENST00000221504 ARID3CA6NKF2 412 aa21.36■■□□□ 1.01
TRMT1-201ENST00000221504 TONSLQ96HA7 1378 aa21.35■■□□□ 1.01
TRMT1-201ENST00000221504 SYNJ2O15056 1496 aa21.34■■□□□ 1.01
TRMT1-201ENST00000221504 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
TRMT1-201ENST00000221504 RRP7BPQ9NSQ0 103 aa21.32■■□□□ 1
TRMT1-201ENST00000221504 CHIC2Q9UKJ5 165 aa21.31■■□□□ 1
TRMT1-201ENST00000221504 CHMP7Q8WUX9 453 aaPredicted RBP21.29■■□□□ 1
TRMT1-201ENST00000221504 KDM6BO15054 1643 aa21.28■■□□□ 1
TRMT1-201ENST00000221504 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
TRMT1-201ENST00000221504 NUP160Q12769 1436 aa21.25■□□□□ 0.99
TRMT1-201ENST00000221504 DENND4BO75064 1496 aaPredicted RBP21.25■□□□□ 0.99
TRMT1-201ENST00000221504 DNMT1P26358 1616 aaKnown RBP21.24■□□□□ 0.99
TRMT1-201ENST00000221504 DAPK1P53355 1430 aa21.24■□□□□ 0.99
TRMT1-201ENST00000221504 KDM5BQ9UGL1 1544 aa21.23■□□□□ 0.99
TRMT1-201ENST00000221504 DDX10Q13206 875 aaKnown RBP21.23■□□□□ 0.99
TRMT1-201ENST00000221504 ROCK1Q13464 1354 aa21.23■□□□□ 0.99
TRMT1-201ENST00000221504 TROQ12816 1431 aaPredicted RBP21.22■□□□□ 0.99
TRMT1-201ENST00000221504 PLB1Q6P1J6 1458 aa21.21■□□□□ 0.99
TRMT1-201ENST00000221504 ABCC5O15440 1437 aa21.2■□□□□ 0.98
TRMT1-201ENST00000221504 CARMIL2Q6F5E8 1435 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms