RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 CFTRP13569 1480 aa14.98□□□□□ -0.01
VPS18-201ENST00000220509 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
VPS18-201ENST00000220509 CNGB1Q14028 1251 aaPredicted RBP14.94□□□□□ -0.02
VPS18-201ENST00000220509 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.94□□□□□ -0.02
VPS18-201ENST00000220509 RAD54L2Q9Y4B4 1467 aa14.94□□□□□ -0.02
VPS18-201ENST00000220509 TRIM52Q96A61 297 aa14.93□□□□□ -0.02
VPS18-201ENST00000220509 POLR3GLQ9BT43 218 aa14.93□□□□□ -0.02
VPS18-201ENST00000220509 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
VPS18-201ENST00000220509 SUPT16HQ9Y5B9 1047 aaKnown RBP14.92□□□□□ -0.02
VPS18-201ENST00000220509 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
VPS18-201ENST00000220509 FGD5Q6ZNL6 1462 aa14.9□□□□□ -0.02
VPS18-201ENST00000220509 NEFLP07196 543 aa14.9□□□□□ -0.02
VPS18-201ENST00000220509 CUX1P39880 1505 aa14.9□□□□□ -0.02
VPS18-201ENST00000220509 KANK4Q5T7N3 995 aaPredicted RBP14.9□□□□□ -0.02
VPS18-201ENST00000220509 AEBP2Q6ZN18 517 aaPredicted RBP14.9□□□□□ -0.02
VPS18-201ENST00000220509 KLHL34Q8N239 644 aa14.88□□□□□ -0.03
VPS18-201ENST00000220509 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
VPS18-201ENST00000220509 IGF1RP08069 1367 aa14.86□□□□□ -0.03
VPS18-201ENST00000220509 FKBP8Q14318 412 aa14.85□□□□□ -0.03
VPS18-201ENST00000220509 TSHZ2Q9NRE2 1034 aa14.82□□□□□ -0.04
VPS18-201ENST00000220509 MYT1LQ9UL68 1186 aa14.82□□□□□ -0.04
VPS18-201ENST00000220509 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
VPS18-201ENST00000220509 A0A0U1RQG5 324 aaPredicted RBP14.8□□□□□ -0.04
VPS18-201ENST00000220509 VPS8Q8N3P4 1428 aa14.8□□□□□ -0.04
VPS18-201ENST00000220509 PDE4CQ08493 712 aa14.8□□□□□ -0.04
VPS18-201ENST00000220509 CHIC2Q9UKJ5 165 aa14.75□□□□□ -0.05
VPS18-201ENST00000220509 ZNF777Q9ULD5 760 aaPredicted RBP14.75□□□□□ -0.05
VPS18-201ENST00000220509 PDIA4P13667 645 aaKnown RBP14.74□□□□□ -0.05
VPS18-201ENST00000220509 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
VPS18-201ENST00000220509 ZNF326Q5BKZ1 582 aaKnown RBP14.73□□□□□ -0.05
VPS18-201ENST00000220509 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.057e-6■□□□□ 9.8
VPS18-201ENST00000220509 FHOD3Q2V2M9 1422 aa14.72□□□□□ -0.05
VPS18-201ENST00000220509 TOPBP1Q92547 1522 aa14.72□□□□□ -0.05
VPS18-201ENST00000220509 POLA1P09884 1462 aaPredicted RBP14.72□□□□□ -0.05
VPS18-201ENST00000220509 MTUS2Q5JR59 1369 aa14.72□□□□□ -0.05
VPS18-201ENST00000220509 KCNH8Q96L42 1107 aa14.68□□□□□ -0.06
VPS18-201ENST00000220509 PRXQ9BXM0 1461 aa14.68□□□□□ -0.06
VPS18-201ENST00000220509 RTN4Q9NQC3 1192 aaKnown RBP14.67□□□□□ -0.06
VPS18-201ENST00000220509 GAPVD1Q14C86 1478 aa14.66□□□□□ -0.06
VPS18-201ENST00000220509 HIRIP3Q9BW71 556 aaPredicted RBP14.66□□□□□ -0.06
VPS18-201ENST00000220509 KIF21BO75037 1637 aa14.65□□□□□ -0.06
VPS18-201ENST00000220509 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
VPS18-201ENST00000220509 DDX10Q13206 875 aaKnown RBP14.65□□□□□ -0.06
VPS18-201ENST00000220509 ARAP1Q96P48 1450 aa14.64□□□□□ -0.07
VPS18-201ENST00000220509 PLPPR3Q6T4P5 718 aa14.64□□□□□ -0.07
VPS18-201ENST00000220509 ANP32CO43423 234 aa14.63□□□□□ -0.07
VPS18-201ENST00000220509 DEKP35659 375 aaKnown RBP14.63□□□□□ -0.07
VPS18-201ENST00000220509 CDK11AQ9UQ88 783 aaPredicted RBP14.62□□□□□ -0.07
VPS18-201ENST00000220509 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
VPS18-201ENST00000220509 RRP7BPQ9NSQ0 103 aa14.61□□□□□ -0.07
VPS18-201ENST00000220509 TONSLQ96HA7 1378 aa14.6□□□□□ -0.07
VPS18-201ENST00000220509 ERICH6BQ5W0A0 696 aa14.59□□□□□ -0.07
VPS18-201ENST00000220509 RBM19Q9Y4C8 960 aaKnown RBP14.59□□□□□ -0.07
VPS18-201ENST00000220509 BIVM-ERCC5R4GMW8 1640 aa14.58□□□□□ -0.07
VPS18-201ENST00000220509 GLIPR1L2Q4G1C9 344 aa14.58□□□□□ -0.07
VPS18-201ENST00000220509 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
VPS18-201ENST00000220509 DNMBPQ6XZF7 1577 aa14.58□□□□□ -0.08
VPS18-201ENST00000220509 ARHGAP35Q9NRY4 1499 aa14.57□□□□□ -0.08
VPS18-201ENST00000220509 CLSPNQ9HAW4 1339 aa14.57□□□□□ -0.08
VPS18-201ENST00000220509 FHAD1B1AJZ9 1412 aa14.57□□□□□ -0.08
VPS18-201ENST00000220509 CCNB3Q8WWL7 1395 aa14.57□□□□□ -0.08
VPS18-201ENST00000220509 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
VPS18-201ENST00000220509 TIMELESSQ9UNS1 1208 aa14.55□□□□□ -0.08
VPS18-201ENST00000220509 SIN3AQ96ST3 1273 aa14.54□□□□□ -0.08
VPS18-201ENST00000220509 ERICH3Q5RHP9 1530 aa14.53□□□□□ -0.08
VPS18-201ENST00000220509 NBR1Q14596 966 aa14.51□□□□□ -0.09
VPS18-201ENST00000220509 JPH4Q96JJ6 628 aa14.5□□□□□ -0.09
VPS18-201ENST00000220509 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
VPS18-201ENST00000220509 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
VPS18-201ENST00000220509 VSIG10Q8N0Z9 540 aa14.48□□□□□ -0.09
VPS18-201ENST00000220509 ZNF608Q9ULD9 1512 aaPredicted RBP14.48□□□□□ -0.09
VPS18-201ENST00000220509 PLEKHD1A6NEE1 506 aa14.46□□□□□ -0.09
VPS18-201ENST00000220509 FMN1Q68DA7 1419 aa14.46□□□□□ -0.09
VPS18-201ENST00000220509 ARXQ96QS3 562 aa14.46□□□□□ -0.1
VPS18-201ENST00000220509 CFDP1Q9UEE9 299 aaPredicted RBP14.43□□□□□ -0.1
VPS18-201ENST00000220509 PHLDB1Q86UU1 1377 aa14.42□□□□□ -0.1
VPS18-201ENST00000220509 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
VPS18-201ENST00000220509 FGD1P98174 961 aa14.41□□□□□ -0.1
VPS18-201ENST00000220509 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
VPS18-201ENST00000220509 ZMYND15Q9H091 742 aa14.41□□□□□ -0.1
VPS18-201ENST00000220509 HNRNPUQ00839 825 aaKnown RBP eCLIP14.41□□□□□ -0.1
VPS18-201ENST00000220509 GRIN2BQ13224 1484 aa14.41□□□□□ -0.1
VPS18-201ENST00000220509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.39□□□□□ -0.11
VPS18-201ENST00000220509 RAB3GAP2Q9H2M9 1393 aa14.39□□□□□ -0.11
VPS18-201ENST00000220509 TULP1O00294 542 aaPredicted RBP14.38□□□□□ -0.11
VPS18-201ENST00000220509 TSPY4P0CV99 314 aa14.38□□□□□ -0.11
VPS18-201ENST00000220509 TSPY10P0CW01 314 aa14.38□□□□□ -0.11
VPS18-201ENST00000220509 SNAPC4Q5SXM2 1469 aa14.37□□□□□ -0.11
VPS18-201ENST00000220509 FOXD1Q16676 465 aa14.37□□□□□ -0.11
VPS18-201ENST00000220509 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
VPS18-201ENST00000220509 IFT140Q96RY7 1462 aa14.35□□□□□ -0.11
VPS18-201ENST00000220509 SENP3-EIF4A1A0A087X0R7 540 aa14.35□□□□□ -0.11
VPS18-201ENST00000220509 IL27Q8NEV9 243 aa14.34□□□□□ -0.11
VPS18-201ENST00000220509 RTL5Q5HYW3 569 aaPredicted RBP14.34□□□□□ -0.11
VPS18-201ENST00000220509 FAM9BQ8IZU0 186 aa14.34□□□□□ -0.11
VPS18-201ENST00000220509 LRRC9Q6ZRR7 1453 aa14.34□□□□□ -0.11
VPS18-201ENST00000220509 ZNF644Q9H582 1327 aaPredicted RBP14.34□□□□□ -0.11
VPS18-201ENST00000220509 RBM10P98175 930 aaKnown RBP14.33□□□□□ -0.12
VPS18-201ENST00000220509 SETD5Q9C0A6 1442 aa14.32□□□□□ -0.12
VPS18-201ENST00000220509 CARMIL2Q6F5E8 1435 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms