RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
CDKL1-201ENST00000216378 ERCC6L2Q5T890 1561 aa18.26■□□□□ 0.51
CDKL1-201ENST00000216378 EEA1Q15075 1411 aa18.26■□□□□ 0.51
CDKL1-201ENST00000216378 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
CDKL1-201ENST00000216378 JPH4Q96JJ6 628 aa18.2■□□□□ 0.5
CDKL1-201ENST00000216378 ARHGEF11O15085 1522 aa18.18■□□□□ 0.5
CDKL1-201ENST00000216378 KIAA0586Q9BVV6 1533 aa18.17■□□□□ 0.5
CDKL1-201ENST00000216378 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
CDKL1-201ENST00000216378 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
CDKL1-201ENST00000216378 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
CDKL1-201ENST00000216378 TTBK1Q5TCY1 1321 aaPredicted RBP18.15■□□□□ 0.5
CDKL1-201ENST00000216378 KIF21BO75037 1637 aa18.15■□□□□ 0.5
CDKL1-201ENST00000216378 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.49
CDKL1-201ENST00000216378 PRG4Q92954 1404 aaPredicted RBP18.13■□□□□ 0.49
CDKL1-201ENST00000216378 SHROOM2Q13796 1616 aa18.12■□□□□ 0.49
CDKL1-201ENST00000216378 CYB5RLQ6IPT4 315 aa18.11■□□□□ 0.49
CDKL1-201ENST00000216378 P3H3Q8IVL6 736 aa18.11■□□□□ 0.49
CDKL1-201ENST00000216378 IQGAP2Q13576 1575 aa18.11■□□□□ 0.49
CDKL1-201ENST00000216378 ARAP1Q96P48 1450 aa18.09■□□□□ 0.49
CDKL1-201ENST00000216378 GOLGA3Q08378 1498 aa18.09■□□□□ 0.49
CDKL1-201ENST00000216378 CTTNBP2Q8WZ74 1663 aa18.07■□□□□ 0.48
CDKL1-201ENST00000216378 DISP1Q96F81 1524 aa18.06■□□□□ 0.48
CDKL1-201ENST00000216378 UGGT2Q9NYU1 1516 aa18■□□□□ 0.47
CDKL1-201ENST00000216378 KIAA0556O60303 1618 aa17.96■□□□□ 0.47
CDKL1-201ENST00000216378 FHOD3Q2V2M9 1422 aa17.95■□□□□ 0.46
CDKL1-201ENST00000216378 TNIKQ9UKE5 1360 aa17.92■□□□□ 0.46
CDKL1-201ENST00000216378 ARID3CA6NKF2 412 aa17.91■□□□□ 0.46
CDKL1-201ENST00000216378 ARHGAP35Q9NRY4 1499 aa17.91■□□□□ 0.46
CDKL1-201ENST00000216378 PTPRGP23470 1445 aa17.91■□□□□ 0.46
CDKL1-201ENST00000216378 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
CDKL1-201ENST00000216378 CARMIL2Q6F5E8 1435 aa17.9■□□□□ 0.46
CDKL1-201ENST00000216378 PCGF6Q9BYE7 350 aa17.9■□□□□ 0.46
CDKL1-201ENST00000216378 PLB1Q6P1J6 1458 aa17.89■□□□□ 0.45
CDKL1-201ENST00000216378 PPARGC1BQ86YN6 1023 aaKnown RBP17.85■□□□□ 0.45
CDKL1-201ENST00000216378 CEP162Q5TB80 1403 aa17.85■□□□□ 0.45
CDKL1-201ENST00000216378 CLIP1P30622 1438 aa17.84■□□□□ 0.45
CDKL1-201ENST00000216378 ADCY10Q96PN6 1610 aa17.84■□□□□ 0.45
CDKL1-201ENST00000216378 UACAQ9BZF9 1416 aa17.78■□□□□ 0.44
CDKL1-201ENST00000216378 EFCAB5A4FU69 1503 aa17.77■□□□□ 0.44
CDKL1-201ENST00000216378 ABCA8O94911 1581 aa17.75■□□□□ 0.43
CDKL1-201ENST00000216378 ATP1B4Q9UN42 357 aaPredicted RBP17.74■□□□□ 0.43
CDKL1-201ENST00000216378 ABCC2Q92887 1545 aa17.72■□□□□ 0.43
CDKL1-201ENST00000216378 NUP153P49790 1475 aaKnown RBP17.71■□□□□ 0.43
CDKL1-201ENST00000216378 HRCP23327 699 aa17.7■□□□□ 0.42
CDKL1-201ENST00000216378 RAPGEF6Q8TEU7 1601 aa17.68■□□□□ 0.42
CDKL1-201ENST00000216378 UHRF1BP1LA0JNW5 1464 aa17.67■□□□□ 0.42
CDKL1-201ENST00000216378 ATP10BO94823 1461 aa17.67■□□□□ 0.42
CDKL1-201ENST00000216378 PCF11O94913 1555 aaKnown RBP17.66■□□□□ 0.42
CDKL1-201ENST00000216378 CDK13Q14004 1512 aaKnown RBP17.66■□□□□ 0.42
CDKL1-201ENST00000216378 KDM5BQ9UGL1 1544 aa17.65■□□□□ 0.42
CDKL1-201ENST00000216378 LRRIQ1Q96JM4 1722 aa17.65■□□□□ 0.42
CDKL1-201ENST00000216378 ZCCHC11Q5TAX3 1644 aaKnown RBP17.65■□□□□ 0.42
CDKL1-201ENST00000216378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
CDKL1-201ENST00000216378 HNRNPUL2Q1KMD3 747 aaKnown RBP17.63■□□□□ 0.41
CDKL1-201ENST00000216378 FMN1Q68DA7 1419 aa17.63■□□□□ 0.41
CDKL1-201ENST00000216378 NPM1P06748 294 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDKL1-201ENST00000216378 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
CDKL1-201ENST00000216378 ASXL2Q76L83 1435 aa17.62■□□□□ 0.41
CDKL1-201ENST00000216378 KCNH8Q96L42 1107 aa17.6■□□□□ 0.41
CDKL1-201ENST00000216378 EPRSP07814 1512 aaKnown RBP17.58■□□□□ 0.41
CDKL1-201ENST00000216378 CASKIN1Q8WXD9 1431 aa17.58■□□□□ 0.4
CDKL1-201ENST00000216378 MAPKBP1O60336 1514 aa17.55■□□□□ 0.4
CDKL1-201ENST00000216378 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
CDKL1-201ENST00000216378 FAM69CQ0P6D2 419 aa17.55■□□□□ 0.4
CDKL1-201ENST00000216378 MAGI3Q5TCQ9 1506 aa17.54■□□□□ 0.4
CDKL1-201ENST00000216378 TRIM26Q12899 539 aaPredicted RBP17.53■□□□□ 0.4
CDKL1-201ENST00000216378 HECW1Q76N89 1606 aa17.52■□□□□ 0.4
CDKL1-201ENST00000216378 FYCO1Q9BQS8 1478 aa17.52■□□□□ 0.39
CDKL1-201ENST00000216378 WDR7Q9Y4E6 1490 aa17.51■□□□□ 0.39
CDKL1-201ENST00000216378 ABCC10Q5T3U5 1492 aa17.5■□□□□ 0.39
CDKL1-201ENST00000216378 KIF13AQ9H1H9 1805 aa17.5■□□□□ 0.39
CDKL1-201ENST00000216378 KANK4Q5T7N3 995 aaPredicted RBP17.49■□□□□ 0.39
CDKL1-201ENST00000216378 DIP2BQ9P265 1576 aa17.49■□□□□ 0.39
CDKL1-201ENST00000216378 PLEKHD1A6NEE1 506 aa17.46■□□□□ 0.39
CDKL1-201ENST00000216378 KIF14Q15058 1648 aa17.44■□□□□ 0.38
CDKL1-201ENST00000216378 TSPOAP1O95153 1857 aa17.43■□□□□ 0.38
CDKL1-201ENST00000216378 AEBP2Q6ZN18 517 aaPredicted RBP17.41■□□□□ 0.38
CDKL1-201ENST00000216378 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
CDKL1-201ENST00000216378 TTC37Q6PGP7 1564 aa17.4■□□□□ 0.38
CDKL1-201ENST00000216378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.39■□□□□ 0.37
CDKL1-201ENST00000216378 TROQ12816 1431 aaPredicted RBP17.39■□□□□ 0.37
CDKL1-201ENST00000216378 TIAM1Q13009 1591 aa17.38■□□□□ 0.37
CDKL1-201ENST00000216378 PPRC1Q5VV67 1664 aaKnown RBP17.36■□□□□ 0.37
CDKL1-201ENST00000216378 MTUS2Q5JR59 1369 aa17.35■□□□□ 0.37
CDKL1-201ENST00000216378 CD109Q6YHK3 1445 aa17.35■□□□□ 0.37
CDKL1-201ENST00000216378 MAP3K4Q9Y6R4 1608 aa17.35■□□□□ 0.37
CDKL1-201ENST00000216378 CFAP43Q8NDM7 1665 aa17.34■□□□□ 0.37
CDKL1-201ENST00000216378 GLI2P10070 1586 aa17.34■□□□□ 0.37
CDKL1-201ENST00000216378 CDK11AQ9UQ88 783 aaPredicted RBP17.34■□□□□ 0.37
CDKL1-201ENST00000216378 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.37
CDKL1-201ENST00000216378 PRKCSHP14314 528 aaPredicted RBP17.33■□□□□ 0.36
CDKL1-201ENST00000216378 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
CDKL1-201ENST00000216378 ABCA9Q8IUA7 1624 aa17.32■□□□□ 0.36
CDKL1-201ENST00000216378 COL17A1Q9UMD9 1497 aaPredicted RBP17.31■□□□□ 0.36
CDKL1-201ENST00000216378 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
CDKL1-201ENST00000216378 NCOA2Q15596 1464 aa17.27■□□□□ 0.35
CDKL1-201ENST00000216378 APLP2Q06481 763 aa17.27■□□□□ 0.35
CDKL1-201ENST00000216378 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
CDKL1-201ENST00000216378 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
CDKL1-201ENST00000216378 MAP3K1Q13233 1512 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms