RNA–Protein interactions for RNA: ENST00000202028.9

EPB41L1-201, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 1 (best) BASIC

Gene EPB41L1, Length 3,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-201ENST00000202028 GRIN2BQ13224 1484 aa12.74□□□□□ -0.37
EPB41L1-201ENST00000202028 NEUROD1Q13562 356 aa12.74□□□□□ -0.37
EPB41L1-201ENST00000202028 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
EPB41L1-201ENST00000202028 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
EPB41L1-201ENST00000202028 ACIN1Q9UKV3 1341 aaKnown RBP12.7□□□□□ -0.38
EPB41L1-201ENST00000202028 FHAD1B1AJZ9 1412 aa12.69□□□□□ -0.38
EPB41L1-201ENST00000202028 APLP2Q06481 763 aa12.69□□□□□ -0.38
EPB41L1-201ENST00000202028 GTF3C3Q9Y5Q9 886 aa12.69□□□□□ -0.38
EPB41L1-201ENST00000202028 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
EPB41L1-201ENST00000202028 CARMIL1Q5VZK9 1371 aa12.69□□□□□ -0.38
EPB41L1-201ENST00000202028 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
EPB41L1-201ENST00000202028 CEP162Q5TB80 1403 aa12.68□□□□□ -0.38
EPB41L1-201ENST00000202028 SAMD9Q5K651 1589 aa12.68□□□□□ -0.38
EPB41L1-201ENST00000202028 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
EPB41L1-201ENST00000202028 SYNJ2O15056 1496 aa12.61□□□□□ -0.39
EPB41L1-201ENST00000202028 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
EPB41L1-201ENST00000202028 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
EPB41L1-201ENST00000202028 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.391e-8■■□□□ 13.5
EPB41L1-201ENST00000202028 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
EPB41L1-201ENST00000202028 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
EPB41L1-201ENST00000202028 GRIN2AQ12879 1464 aa12.58□□□□□ -0.39
EPB41L1-201ENST00000202028 MAP3K1Q13233 1512 aa12.58□□□□□ -0.4
EPB41L1-201ENST00000202028 CLIP1P30622 1438 aa12.58□□□□□ -0.4
EPB41L1-201ENST00000202028 IQGAP2Q13576 1575 aa12.58□□□□□ -0.4
EPB41L1-201ENST00000202028 ARAP1Q96P48 1450 aa12.58□□□□□ -0.4
EPB41L1-201ENST00000202028 NUP160Q12769 1436 aa12.57□□□□□ -0.4
EPB41L1-201ENST00000202028 ARHGAP35Q9NRY4 1499 aa12.56□□□□□ -0.4
EPB41L1-201ENST00000202028 VPS8Q8N3P4 1428 aa12.56□□□□□ -0.4
EPB41L1-201ENST00000202028 CHD1O14646 1710 aa12.55□□□□□ -0.4
EPB41L1-201ENST00000202028 SHROOM2Q13796 1616 aa12.55□□□□□ -0.4
EPB41L1-201ENST00000202028 CFAP43Q8NDM7 1665 aa12.54□□□□□ -0.4
EPB41L1-201ENST00000202028 KIAA0586Q9BVV6 1533 aa12.54□□□□□ -0.4
EPB41L1-201ENST00000202028 CEP170Q5SW79 1584 aa12.54□□□□□ -0.4
EPB41L1-201ENST00000202028 ITGAEP38570 1179 aa12.49□□□□□ -0.41
EPB41L1-201ENST00000202028 MIER1Q8N108 512 aa12.49□□□□□ -0.41
EPB41L1-201ENST00000202028 KIAA0556O60303 1618 aa12.48□□□□□ -0.41
EPB41L1-201ENST00000202028 FYCO1Q9BQS8 1478 aa12.47□□□□□ -0.41
EPB41L1-201ENST00000202028 CLASP1Q7Z460 1538 aa12.46□□□□□ -0.41
EPB41L1-201ENST00000202028 LRRIQ1Q96JM4 1722 aa12.44□□□□□ -0.42
EPB41L1-201ENST00000202028 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
EPB41L1-201ENST00000202028 FMN1Q68DA7 1419 aa12.42□□□□□ -0.42
EPB41L1-201ENST00000202028 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
EPB41L1-201ENST00000202028 TIAM1Q13009 1591 aa12.42□□□□□ -0.42
EPB41L1-201ENST00000202028 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
EPB41L1-201ENST00000202028 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
EPB41L1-201ENST00000202028 ATP1B4Q9UN42 357 aaPredicted RBP12.37□□□□□ -0.43
EPB41L1-201ENST00000202028 CCDC18Q5T9S5 1454 aa12.36□□□□□ -0.43
EPB41L1-201ENST00000202028 RAPGEF6Q8TEU7 1601 aa12.35□□□□□ -0.43
EPB41L1-201ENST00000202028 ABCA8O94911 1581 aa12.33□□□□□ -0.44
EPB41L1-201ENST00000202028 ADCY10Q96PN6 1610 aa12.32□□□□□ -0.44
EPB41L1-201ENST00000202028 FHOD3Q2V2M9 1422 aa12.31□□□□□ -0.44
EPB41L1-201ENST00000202028 ARHGEF11O15085 1522 aa12.3□□□□□ -0.44
EPB41L1-201ENST00000202028 EHBP1L1Q8N3D4 1523 aa12.3□□□□□ -0.44
EPB41L1-201ENST00000202028 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
EPB41L1-201ENST00000202028 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
EPB41L1-201ENST00000202028 LRRC9Q6ZRR7 1453 aa12.28□□□□□ -0.44
EPB41L1-201ENST00000202028 CHMP7Q8WUX9 453 aaPredicted RBP12.28□□□□□ -0.44
EPB41L1-201ENST00000202028 SUPT6HQ7KZ85 1726 aaKnown RBP12.27□□□□□ -0.45
EPB41L1-201ENST00000202028 UHRF1BP1LA0JNW5 1464 aa12.25□□□□□ -0.45
EPB41L1-201ENST00000202028 RRBP1Q9P2E9 1410 aaKnown RBP12.24□□□□□ -0.45
EPB41L1-201ENST00000202028 EPRSP07814 1512 aaKnown RBP12.24□□□□□ -0.45
EPB41L1-201ENST00000202028 P3H3Q8IVL6 736 aa12.23□□□□□ -0.45
EPB41L1-201ENST00000202028 NUP153P49790 1475 aaKnown RBP12.22□□□□□ -0.45
EPB41L1-201ENST00000202028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.22□□□□□ -0.456e-7■■□□□ 13.4
EPB41L1-201ENST00000202028 FAM50AQ14320 339 aaKnown RBP12.21□□□□□ -0.45
EPB41L1-201ENST00000202028 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
EPB41L1-201ENST00000202028 ITSN2Q9NZM3 1697 aa12.19□□□□□ -0.46
EPB41L1-201ENST00000202028 PRG4Q92954 1404 aaPredicted RBP12.18□□□□□ -0.46
EPB41L1-201ENST00000202028 MAGI3Q5TCQ9 1506 aa12.18□□□□□ -0.46
EPB41L1-201ENST00000202028 JPH4Q96JJ6 628 aa12.18□□□□□ -0.46
EPB41L1-201ENST00000202028 BCANQ96GW7 911 aa12.17□□□□□ -0.46
EPB41L1-201ENST00000202028 DHX57Q6P158 1386 aaKnown RBP12.15□□□□□ -0.46
EPB41L1-201ENST00000202028 ERCC6L2Q5T890 1561 aa12.15□□□□□ -0.46
EPB41L1-201ENST00000202028 HIRIP3Q9BW71 556 aaPredicted RBP12.15□□□□□ -0.47
EPB41L1-201ENST00000202028 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
EPB41L1-201ENST00000202028 KDM5BQ9UGL1 1544 aa12.14□□□□□ -0.47
EPB41L1-201ENST00000202028 ZCCHC11Q5TAX3 1644 aaKnown RBP12.12□□□□□ -0.47
EPB41L1-201ENST00000202028 UACAQ9BZF9 1416 aa12.12□□□□□ -0.47
EPB41L1-201ENST00000202028 PLB1Q6P1J6 1458 aa12.11□□□□□ -0.47
EPB41L1-201ENST00000202028 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
EPB41L1-201ENST00000202028 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
EPB41L1-201ENST00000202028 KIF14Q15058 1648 aa12.11□□□□□ -0.47
EPB41L1-201ENST00000202028 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
EPB41L1-201ENST00000202028 MIA2Q96PC5 1412 aa12.1□□□□□ -0.47
EPB41L1-201ENST00000202028 NCOA2Q15596 1464 aa12.1□□□□□ -0.47
EPB41L1-201ENST00000202028 CDC42BPAQ5VT25 1732 aa12.1□□□□□ -0.47
EPB41L1-201ENST00000202028 TROQ12816 1431 aaPredicted RBP12.1□□□□□ -0.47
EPB41L1-201ENST00000202028 SIN3AQ96ST3 1273 aa12.1□□□□□ -0.47
EPB41L1-201ENST00000202028 PTPRGP23470 1445 aa12.09□□□□□ -0.47
EPB41L1-201ENST00000202028 ATP10BO94823 1461 aa12.08□□□□□ -0.47
EPB41L1-201ENST00000202028 ARAP3Q8WWN8 1544 aa12.08□□□□□ -0.47
EPB41L1-201ENST00000202028 CROCC2H7BZ55 1655 aa12.08□□□□□ -0.47
EPB41L1-201ENST00000202028 CCNB3Q8WWL7 1395 aa12.08□□□□□ -0.48
EPB41L1-201ENST00000202028 PREX2Q70Z35 1606 aa12.08□□□□□ -0.48
EPB41L1-201ENST00000202028 PTPN23Q9H3S7 1636 aa12.08□□□□□ -0.48
EPB41L1-201ENST00000202028 MYOM3Q5VTT5 1437 aa12.08□□□□□ -0.48
EPB41L1-201ENST00000202028 SUPT16HQ9Y5B9 1047 aaKnown RBP12.08□□□□□ -0.48
EPB41L1-201ENST00000202028 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
EPB41L1-201ENST00000202028 MYT1Q01538 1121 aa12.06□□□□□ -0.48
EPB41L1-201ENST00000202028 FGD6Q6ZV73 1430 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms