RNA–Protein interactions for RNA: ENST00000165698.9

REEP1-201, Transcript of receptor accessory protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene REEP1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP1-201ENST00000165698 IGF1RP08069 1367 aa16.51■□□□□ 0.23
REEP1-201ENST00000165698 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
REEP1-201ENST00000165698 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
REEP1-201ENST00000165698 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
REEP1-201ENST00000165698 KDM2AQ9Y2K7 1162 aa16.45■□□□□ 0.22
REEP1-201ENST00000165698 CUX1P39880 1505 aa16.45■□□□□ 0.22
REEP1-201ENST00000165698 VPS8Q8N3P4 1428 aa16.42■□□□□ 0.22
REEP1-201ENST00000165698 CFTRP13569 1480 aa16.41■□□□□ 0.22
REEP1-201ENST00000165698 MIER1Q8N108 512 aa16.4■□□□□ 0.22
REEP1-201ENST00000165698 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
REEP1-201ENST00000165698 CENPBP07199 599 aaPredicted RBP16.38■□□□□ 0.21
REEP1-201ENST00000165698 RGL3Q3MIN7 710 aa16.37■□□□□ 0.21
REEP1-201ENST00000165698 BCANQ96GW7 911 aa16.37■□□□□ 0.21
REEP1-201ENST00000165698 CDK11AQ9UQ88 783 aaPredicted RBP16.35■□□□□ 0.21
REEP1-201ENST00000165698 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
REEP1-201ENST00000165698 CFDP1Q9UEE9 299 aaPredicted RBP16.34■□□□□ 0.21
REEP1-201ENST00000165698 ZNF644Q9H582 1327 aaPredicted RBP16.33■□□□□ 0.21
REEP1-201ENST00000165698 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
REEP1-201ENST00000165698 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
REEP1-201ENST00000165698 PLEKHD1A6NEE1 506 aa16.31■□□□□ 0.2
REEP1-201ENST00000165698 CCNB3Q8WWL7 1395 aa16.3■□□□□ 0.2
REEP1-201ENST00000165698 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
REEP1-201ENST00000165698 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.2
REEP1-201ENST00000165698 GAPVD1Q14C86 1478 aa16.26■□□□□ 0.19
REEP1-201ENST00000165698 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
REEP1-201ENST00000165698 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
REEP1-201ENST00000165698 TONSLQ96HA7 1378 aa16.23■□□□□ 0.19
REEP1-201ENST00000165698 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
REEP1-201ENST00000165698 TSPY4P0CV99 314 aa16.22■□□□□ 0.19
REEP1-201ENST00000165698 TSPY10P0CW01 314 aa16.22■□□□□ 0.19
REEP1-201ENST00000165698 KIF21BO75037 1637 aa16.21■□□□□ 0.19
REEP1-201ENST00000165698 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
REEP1-201ENST00000165698 RAB3GAP2Q9H2M9 1393 aa16.19■□□□□ 0.18
REEP1-201ENST00000165698 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
REEP1-201ENST00000165698 ARHGAP35Q9NRY4 1499 aa16.17■□□□□ 0.18
REEP1-201ENST00000165698 PHLDB1Q86UU1 1377 aa16.17■□□□□ 0.18
REEP1-201ENST00000165698 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
REEP1-201ENST00000165698 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
REEP1-201ENST00000165698 CYB5RLQ6IPT4 315 aa16.15■□□□□ 0.18
REEP1-201ENST00000165698 URB2Q14146 1524 aaKnown RBP16.14■□□□□ 0.17
REEP1-201ENST00000165698 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
REEP1-201ENST00000165698 MLECQ14165 292 aa16.13■□□□□ 0.17
REEP1-201ENST00000165698 SCAF1Q9H7N4 1312 aaKnown RBP16.13■□□□□ 0.17
REEP1-201ENST00000165698 PRXQ9BXM0 1461 aa16.12■□□□□ 0.17
REEP1-201ENST00000165698 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
REEP1-201ENST00000165698 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
REEP1-201ENST00000165698 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
REEP1-201ENST00000165698 NUTM2DQ5VT03 806 aaPredicted RBP16.07■□□□□ 0.16
REEP1-201ENST00000165698 IRX6P78412 446 aaPredicted RBP16.07■□□□□ 0.16
REEP1-201ENST00000165698 ANP32CO43423 234 aa16.05■□□□□ 0.16
REEP1-201ENST00000165698 GGT6Q6P531 493 aa16.02■□□□□ 0.16
REEP1-201ENST00000165698 PKD2Q13563 968 aa16.01■□□□□ 0.15
REEP1-201ENST00000165698 ACIN1Q9UKV3 1341 aaKnown RBP16■□□□□ 0.15
REEP1-201ENST00000165698 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
REEP1-201ENST00000165698 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
REEP1-201ENST00000165698 FMN1Q68DA7 1419 aa15.99■□□□□ 0.15
REEP1-201ENST00000165698 SETD5Q9C0A6 1442 aa15.98■□□□□ 0.15
REEP1-201ENST00000165698 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
REEP1-201ENST00000165698 BCL11AQ9H165 835 aa15.97■□□□□ 0.15
REEP1-201ENST00000165698 MPHOSPH9Q99550 1183 aa15.97■□□□□ 0.15
REEP1-201ENST00000165698 SAFB2Q14151 953 aaKnown RBP eCLIP15.96■□□□□ 0.15
REEP1-201ENST00000165698 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
REEP1-201ENST00000165698 HNRNPUQ00839 825 aaKnown RBP eCLIP15.94■□□□□ 0.14
REEP1-201ENST00000165698 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
REEP1-201ENST00000165698 CDK13Q14004 1512 aaKnown RBP15.94■□□□□ 0.14
REEP1-201ENST00000165698 L3MBTL2Q969R5 705 aa15.94■□□□□ 0.14
REEP1-201ENST00000165698 MRC2Q9UBG0 1479 aa15.93■□□□□ 0.14
REEP1-201ENST00000165698 NEFLP07196 543 aa15.93■□□□□ 0.14
REEP1-201ENST00000165698 PTPRGP23470 1445 aa15.93■□□□□ 0.14
REEP1-201ENST00000165698 PRG4Q92954 1404 aaPredicted RBP15.93■□□□□ 0.14
REEP1-201ENST00000165698 AFAP1Q8N556 730 aa15.92■□□□□ 0.14
REEP1-201ENST00000165698 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
REEP1-201ENST00000165698 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
REEP1-201ENST00000165698 CARMIL2Q6F5E8 1435 aa15.89■□□□□ 0.14
REEP1-201ENST00000165698 ARID4BQ4LE39 1312 aaPredicted RBP15.89■□□□□ 0.13
REEP1-201ENST00000165698 LRRC9Q6ZRR7 1453 aa15.89■□□□□ 0.13
REEP1-201ENST00000165698 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
REEP1-201ENST00000165698 NUP155O75694 1391 aa15.88■□□□□ 0.13
REEP1-201ENST00000165698 PLB1Q6P1J6 1458 aa15.88■□□□□ 0.13
REEP1-201ENST00000165698 KIF3BO15066 747 aa15.87■□□□□ 0.13
REEP1-201ENST00000165698 EIF4G2P78344 907 aaKnown RBP eCLIP15.87■□□□□ 0.13
REEP1-201ENST00000165698 TNNT2P45379 298 aaPredicted RBP15.86■□□□□ 0.13
REEP1-201ENST00000165698 CARD11Q9BXL7 1154 aa15.86■□□□□ 0.13
REEP1-201ENST00000165698 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
REEP1-201ENST00000165698 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
REEP1-201ENST00000165698 OSCARQ8IYS5 282 aa15.83■□□□□ 0.13
REEP1-201ENST00000165698 MRS2Q9HD23 443 aa15.83■□□□□ 0.12
REEP1-201ENST00000165698 KIF21AQ7Z4S6 1674 aa15.83■□□□□ 0.12
REEP1-201ENST00000165698 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
REEP1-201ENST00000165698 FKBP8Q14318 412 aa15.81■□□□□ 0.12
REEP1-201ENST00000165698 NCOA2Q15596 1464 aa15.81■□□□□ 0.12
REEP1-201ENST00000165698 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
REEP1-201ENST00000165698 FGD6Q6ZV73 1430 aa15.8■□□□□ 0.12
REEP1-201ENST00000165698 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
REEP1-201ENST00000165698 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
REEP1-201ENST00000165698 TMC1Q8TDI8 760 aa15.79■□□□□ 0.12
REEP1-201ENST00000165698 CC2D1BQ5T0F9 858 aaKnown RBP15.78■□□□□ 0.12
REEP1-201ENST00000165698 STK26Q9P289 416 aa15.78■□□□□ 0.12
REEP1-201ENST00000165698 PCF11O94913 1555 aaKnown RBP15.78■□□□□ 0.12
REEP1-201ENST00000165698 BIVM-ERCC5R4GMW8 1640 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms