RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 SETD5Q9C0A6 1442 aa19.24■□□□□ 0.67
TNIP3-201ENST00000057513 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
TNIP3-201ENST00000057513 ERICH6Q7L0X2 663 aa19.21■□□□□ 0.67
TNIP3-201ENST00000057513 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
TNIP3-201ENST00000057513 ARHGAP35Q9NRY4 1499 aa19.21■□□□□ 0.67
TNIP3-201ENST00000057513 CDK11AQ9UQ88 783 aaPredicted RBP19.19■□□□□ 0.66
TNIP3-201ENST00000057513 ATAD2BQ9ULI0 1458 aa19.17■□□□□ 0.66
TNIP3-201ENST00000057513 TIMELESSQ9UNS1 1208 aa19.16■□□□□ 0.66
TNIP3-201ENST00000057513 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
TNIP3-201ENST00000057513 BICRAQ9NZM4 1560 aa19.14■□□□□ 0.65
TNIP3-201ENST00000057513 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
TNIP3-201ENST00000057513 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
TNIP3-201ENST00000057513 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
TNIP3-201ENST00000057513 PHLDB1Q86UU1 1377 aa19.08■□□□□ 0.65
TNIP3-201ENST00000057513 HNRNPUQ00839 825 aaKnown RBP eCLIP19.08■□□□□ 0.64
TNIP3-201ENST00000057513 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
TNIP3-201ENST00000057513 MAP3K1Q13233 1512 aa19.05■□□□□ 0.64
TNIP3-201ENST00000057513 LRRC9Q6ZRR7 1453 aa19.04■□□□□ 0.64
TNIP3-201ENST00000057513 DEKP35659 375 aaKnown RBP19.03■□□□□ 0.64
TNIP3-201ENST00000057513 CUX1P39880 1505 aa19.02■□□□□ 0.63
TNIP3-201ENST00000057513 ERICH6BQ5W0A0 696 aa18.98■□□□□ 0.63
TNIP3-201ENST00000057513 PPP4R2Q9NY27 417 aa18.98■□□□□ 0.63
TNIP3-201ENST00000057513 TONSLQ96HA7 1378 aa18.97■□□□□ 0.63
TNIP3-201ENST00000057513 PRKCSHP14314 528 aaPredicted RBP18.95■□□□□ 0.62
TNIP3-201ENST00000057513 B4GALNT3Q6L9W6 998 aa18.9■□□□□ 0.62
TNIP3-201ENST00000057513 CFAP43Q8NDM7 1665 aa18.88■□□□□ 0.61
TNIP3-201ENST00000057513 NOP58Q9Y2X3 529 aaKnown RBP18.87■□□□□ 0.61
TNIP3-201ENST00000057513 NBR1Q14596 966 aa18.86■□□□□ 0.61
TNIP3-201ENST00000057513 FHAD1B1AJZ9 1412 aa18.85■□□□□ 0.61
TNIP3-201ENST00000057513 IGF1RP08069 1367 aa18.85■□□□□ 0.61
TNIP3-201ENST00000057513 ATP1B4Q9UN42 357 aaPredicted RBP18.84■□□□□ 0.61
TNIP3-201ENST00000057513 PCF11O94913 1555 aaKnown RBP18.83■□□□□ 0.61
TNIP3-201ENST00000057513 PAK3O75914 559 aaPredicted RBP18.83■□□□□ 0.61
TNIP3-201ENST00000057513 CCDC184Q52MB2 194 aa18.83■□□□□ 0.61
TNIP3-201ENST00000057513 WASHC2AQ641Q2 1341 aa18.83■□□□□ 0.61
TNIP3-201ENST00000057513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.82■□□□□ 0.6
TNIP3-201ENST00000057513 CCDC18Q5T9S5 1454 aa18.82■□□□□ 0.6
TNIP3-201ENST00000057513 P3H3Q8IVL6 736 aa18.81■□□□□ 0.6
TNIP3-201ENST00000057513 UACAQ9BZF9 1416 aa18.79■□□□□ 0.6
TNIP3-201ENST00000057513 KDM5BQ9UGL1 1544 aa18.79■□□□□ 0.6
TNIP3-201ENST00000057513 CARMIL1Q5VZK9 1371 aa18.78■□□□□ 0.6
TNIP3-201ENST00000057513 HSPA5P11021 654 aaKnown RBP18.78■□□□□ 0.6
TNIP3-201ENST00000057513 FAM9BQ8IZU0 186 aa18.76■□□□□ 0.59
TNIP3-201ENST00000057513 ZBED9Q6R2W3 1325 aa18.74■□□□□ 0.59
TNIP3-201ENST00000057513 HFM1A2PYH4 1435 aa18.74■□□□□ 0.59
TNIP3-201ENST00000057513 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
TNIP3-201ENST00000057513 PTPRKQ15262 1439 aa18.73■□□□□ 0.59
TNIP3-201ENST00000057513 CNTLNQ9NXG0 1405 aa18.72■□□□□ 0.59
TNIP3-201ENST00000057513 PTPN23Q9H3S7 1636 aa18.72■□□□□ 0.59
TNIP3-201ENST00000057513 NCOA2Q15596 1464 aa18.72■□□□□ 0.59
TNIP3-201ENST00000057513 ANO8Q9HCE9 1232 aaPredicted RBP18.72■□□□□ 0.59
TNIP3-201ENST00000057513 PRKRIP1Q9H875 184 aaPredicted RBP18.71■□□□□ 0.59
TNIP3-201ENST00000057513 MRS2Q9HD23 443 aa18.71■□□□□ 0.59
TNIP3-201ENST00000057513 FHOD3Q2V2M9 1422 aa18.7■□□□□ 0.58
TNIP3-201ENST00000057513 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.58
TNIP3-201ENST00000057513 CFTRP13569 1480 aa18.7■□□□□ 0.58
TNIP3-201ENST00000057513 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
TNIP3-201ENST00000057513 EIF4G2P78344 907 aaKnown RBP eCLIP18.68■□□□□ 0.58
TNIP3-201ENST00000057513 NAIPQ13075 1403 aa18.67■□□□□ 0.58
TNIP3-201ENST00000057513 IPO9Q96P70 1041 aaKnown RBP18.67■□□□□ 0.58
TNIP3-201ENST00000057513 CASKIN1Q8WXD9 1431 aa18.66■□□□□ 0.58
TNIP3-201ENST00000057513 ANP32AP39687 249 aaKnown RBP18.65■□□□□ 0.58
TNIP3-201ENST00000057513 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
TNIP3-201ENST00000057513 C11orf95C9JLR9 678 aaPredicted RBP18.65■□□□□ 0.58
TNIP3-201ENST00000057513 RTL5Q5HYW3 569 aaPredicted RBP18.65■□□□□ 0.58
TNIP3-201ENST00000057513 HMGXB3Q12766 1538 aa18.65■□□□□ 0.58
TNIP3-201ENST00000057513 NCAPD3P42695 1498 aa18.62■□□□□ 0.57
TNIP3-201ENST00000057513 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
TNIP3-201ENST00000057513 AKNAQ7Z591 1439 aa18.61■□□□□ 0.57
TNIP3-201ENST00000057513 CCDC7Q96M83 1385 aa18.61■□□□□ 0.57
TNIP3-201ENST00000057513 SALL2Q9Y467 1007 aaPredicted RBP18.61■□□□□ 0.57
TNIP3-201ENST00000057513 FMN1Q68DA7 1419 aa18.61■□□□□ 0.57
TNIP3-201ENST00000057513 NCOA1Q15788 1441 aa18.6■□□□□ 0.57
TNIP3-201ENST00000057513 CCDC136Q96JN2 1154 aa18.6■□□□□ 0.57
TNIP3-201ENST00000057513 MTUS2Q5JR59 1369 aa18.58■□□□□ 0.56
TNIP3-201ENST00000057513 SMG6Q86US8 1419 aaKnown RBP18.57■□□□□ 0.56
TNIP3-201ENST00000057513 IL27Q8NEV9 243 aa18.57■□□□□ 0.56
TNIP3-201ENST00000057513 EFCAB5A4FU69 1503 aa18.56■□□□□ 0.56
TNIP3-201ENST00000057513 DENND4BO75064 1496 aaPredicted RBP18.55■□□□□ 0.56
TNIP3-201ENST00000057513 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
TNIP3-201ENST00000057513 L3MBTL2Q969R5 705 aa18.53■□□□□ 0.56
TNIP3-201ENST00000057513 RRP7BPQ9NSQ0 103 aa18.53■□□□□ 0.56
TNIP3-201ENST00000057513 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
TNIP3-201ENST00000057513 MYOM3Q5VTT5 1437 aa18.53■□□□□ 0.56
TNIP3-201ENST00000057513 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
TNIP3-201ENST00000057513 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
TNIP3-201ENST00000057513 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
TNIP3-201ENST00000057513 KIF7Q2M1P5 1343 aa18.49■□□□□ 0.55
TNIP3-201ENST00000057513 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
TNIP3-201ENST00000057513 CHIC2Q9UKJ5 165 aa18.48■□□□□ 0.55
TNIP3-201ENST00000057513 NBPF8Q3BBV2 869 aa18.45■□□□□ 0.54
TNIP3-201ENST00000057513 LRRIQ1Q96JM4 1722 aa18.45■□□□□ 0.54
TNIP3-201ENST00000057513 FOXD1Q16676 465 aa18.44■□□□□ 0.54
TNIP3-201ENST00000057513 MPHOSPH9Q99550 1183 aa18.44■□□□□ 0.54
TNIP3-201ENST00000057513 NPM2Q86SE8 214 aaKnown RBP18.44■□□□□ 0.54
TNIP3-201ENST00000057513 KDM6BO15054 1643 aa18.44■□□□□ 0.54
TNIP3-201ENST00000057513 GCC2Q8IWJ2 1684 aa18.43■□□□□ 0.54
TNIP3-201ENST00000057513 SENP3-EIF4A1A0A087X0R7 540 aa18.43■□□□□ 0.54
TNIP3-201ENST00000057513 CNGB1Q14028 1251 aaPredicted RBP18.43■□□□□ 0.54
TNIP3-201ENST00000057513 ABCA5Q8WWZ7 1642 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms