RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 PBRM1Q86U86 1689 aa16.46■□□□□ 0.23
CD4-201ENST00000011653 SLC24A1O60721 1099 aa16.46■□□□□ 0.23
CD4-201ENST00000011653 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
CD4-201ENST00000011653 TRIM26Q12899 539 aaPredicted RBP16.43■□□□□ 0.22
CD4-201ENST00000011653 CUL7Q14999 1698 aa16.42■□□□□ 0.22
CD4-201ENST00000011653 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
CD4-201ENST00000011653 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
CD4-201ENST00000011653 APLP2Q06481 763 aa16.35■□□□□ 0.21
CD4-201ENST00000011653 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
CD4-201ENST00000011653 SYNJ2O15056 1496 aa16.34■□□□□ 0.21
CD4-201ENST00000011653 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
CD4-201ENST00000011653 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
CD4-201ENST00000011653 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
CD4-201ENST00000011653 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
CD4-201ENST00000011653 JPH4Q96JJ6 628 aa16.29■□□□□ 0.2
CD4-201ENST00000011653 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
CD4-201ENST00000011653 CTTNBP2Q8WZ74 1663 aa16.23■□□□□ 0.19
CD4-201ENST00000011653 CEP170Q5SW79 1584 aa16.23■□□□□ 0.19
CD4-201ENST00000011653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
CD4-201ENST00000011653 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
CD4-201ENST00000011653 IQGAP2Q13576 1575 aa16.21■□□□□ 0.19
CD4-201ENST00000011653 KIAA0586Q9BVV6 1533 aa16.21■□□□□ 0.19
CD4-201ENST00000011653 CHD1O14646 1710 aa16.21■□□□□ 0.19
CD4-201ENST00000011653 ZEB1P37275 1124 aaPredicted RBP16.18■□□□□ 0.18
CD4-201ENST00000011653 KANK4Q5T7N3 995 aaPredicted RBP16.17■□□□□ 0.18
CD4-201ENST00000011653 NUP160Q12769 1436 aa16.16■□□□□ 0.18
CD4-201ENST00000011653 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
CD4-201ENST00000011653 PRG4Q92954 1404 aaPredicted RBP16.14■□□□□ 0.17
CD4-201ENST00000011653 CARMIL2Q6F5E8 1435 aa16.1■□□□□ 0.17
CD4-201ENST00000011653 EFCAB5A4FU69 1503 aa16.08■□□□□ 0.17
CD4-201ENST00000011653 DISP1Q96F81 1524 aa16.08■□□□□ 0.16
CD4-201ENST00000011653 FMN1Q68DA7 1419 aa16.08■□□□□ 0.16
CD4-201ENST00000011653 UGGT2Q9NYU1 1516 aa16.06■□□□□ 0.16
CD4-201ENST00000011653 PCF11O94913 1555 aaKnown RBP16.05■□□□□ 0.16
CD4-201ENST00000011653 SAMD9Q5K651 1589 aa16.04■□□□□ 0.16
CD4-201ENST00000011653 ERCC6L2Q5T890 1561 aa16.04■□□□□ 0.16
CD4-201ENST00000011653 PTPRGP23470 1445 aa16.03■□□□□ 0.16
CD4-201ENST00000011653 KIAA0556O60303 1618 aa16.03■□□□□ 0.16
CD4-201ENST00000011653 ITGAEP38570 1179 aa16.02■□□□□ 0.16
CD4-201ENST00000011653 PLB1Q6P1J6 1458 aa16.02■□□□□ 0.16
CD4-201ENST00000011653 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
CD4-201ENST00000011653 CASKIN1Q8WXD9 1431 aa15.99■□□□□ 0.15
CD4-201ENST00000011653 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
CD4-201ENST00000011653 CDK13Q14004 1512 aaKnown RBP15.96■□□□□ 0.15
CD4-201ENST00000011653 FYCO1Q9BQS8 1478 aa15.95■□□□□ 0.14
CD4-201ENST00000011653 FAM50AQ14320 339 aaKnown RBP15.93■□□□□ 0.14
CD4-201ENST00000011653 CYB5RLQ6IPT4 315 aa15.93■□□□□ 0.14
CD4-201ENST00000011653 CLASP1Q7Z460 1538 aa15.93■□□□□ 0.14
CD4-201ENST00000011653 KCNH8Q96L42 1107 aa15.92■□□□□ 0.14
CD4-201ENST00000011653 TIAM1Q13009 1591 aa15.91■□□□□ 0.14
CD4-201ENST00000011653 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
CD4-201ENST00000011653 LRRC9Q6ZRR7 1453 aa15.89■□□□□ 0.13
CD4-201ENST00000011653 CDK11AQ9UQ88 783 aaPredicted RBP15.89■□□□□ 0.13
CD4-201ENST00000011653 NUP153P49790 1475 aaKnown RBP15.88■□□□□ 0.13
CD4-201ENST00000011653 PLEKHD1A6NEE1 506 aa15.88■□□□□ 0.13
CD4-201ENST00000011653 RAPGEF6Q8TEU7 1601 aa15.87■□□□□ 0.13
CD4-201ENST00000011653 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
CD4-201ENST00000011653 ZNF777Q9ULD5 760 aaPredicted RBP15.85■□□□□ 0.13
CD4-201ENST00000011653 UACAQ9BZF9 1416 aa15.85■□□□□ 0.13
CD4-201ENST00000011653 SHROOM2Q13796 1616 aa15.85■□□□□ 0.13
CD4-201ENST00000011653 PHLDB1Q86UU1 1377 aa15.84■□□□□ 0.13
CD4-201ENST00000011653 LRRIQ1Q96JM4 1722 aa15.84■□□□□ 0.13
CD4-201ENST00000011653 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
CD4-201ENST00000011653 MAGI3Q5TCQ9 1506 aa15.81■□□□□ 0.12
CD4-201ENST00000011653 ATP10BO94823 1461 aa15.81■□□□□ 0.12
CD4-201ENST00000011653 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
CD4-201ENST00000011653 ABCA8O94911 1581 aa15.77■□□□□ 0.12
CD4-201ENST00000011653 CFAP43Q8NDM7 1665 aa15.77■□□□□ 0.12
CD4-201ENST00000011653 NCOA2Q15596 1464 aa15.77■□□□□ 0.11
CD4-201ENST00000011653 CCNB3Q8WWL7 1395 aa15.76■□□□□ 0.11
CD4-201ENST00000011653 ARHGEF11O15085 1522 aa15.76■□□□□ 0.11
CD4-201ENST00000011653 PRKCSHP14314 528 aaPredicted RBP15.75■□□□□ 0.11
CD4-201ENST00000011653 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
CD4-201ENST00000011653 CHIC2Q9UKJ5 165 aa15.75■□□□□ 0.11
CD4-201ENST00000011653 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
CD4-201ENST00000011653 CFDP1Q9UEE9 299 aaPredicted RBP15.73■□□□□ 0.11
CD4-201ENST00000011653 ABCC2Q92887 1545 aa15.72■□□□□ 0.11
CD4-201ENST00000011653 CCER1Q8TC90 406 aaPredicted RBP15.72■□□□□ 0.11
CD4-201ENST00000011653 TROQ12816 1431 aaPredicted RBP15.72■□□□□ 0.11
CD4-201ENST00000011653 EHBP1L1Q8N3D4 1523 aa15.72■□□□□ 0.11
CD4-201ENST00000011653 SUPT6HQ7KZ85 1726 aaKnown RBP15.68■□□□□ 0.1
CD4-201ENST00000011653 MYOM3Q5VTT5 1437 aa15.67■□□□□ 0.1
CD4-201ENST00000011653 FGD6Q6ZV73 1430 aa15.67■□□□□ 0.1
CD4-201ENST00000011653 KIF14Q15058 1648 aa15.67■□□□□ 0.1
CD4-201ENST00000011653 RIMBP3CA6NJZ7 1639 aa15.65■□□□□ 0.1
CD4-201ENST00000011653 RIMBP3BA6NNM3 1639 aa15.65■□□□□ 0.1
CD4-201ENST00000011653 ADCY10Q96PN6 1610 aa15.65■□□□□ 0.1
CD4-201ENST00000011653 RIMBP3Q9UFD9 1639 aa15.65■□□□□ 0.1
CD4-201ENST00000011653 RRBP1Q9P2E9 1410 aaKnown RBP15.65■□□□□ 0.1
CD4-201ENST00000011653 MYT1Q01538 1121 aa15.64■□□□□ 0.09
CD4-201ENST00000011653 RRP7BPQ9NSQ0 103 aa15.64■□□□□ 0.09
CD4-201ENST00000011653 HNRNPMP52272 730 aaKnown RBP eCLIP15.62■□□□□ 0.09
CD4-201ENST00000011653 ZCCHC11Q5TAX3 1644 aaKnown RBP15.62■□□□□ 0.09
CD4-201ENST00000011653 ASXL2Q76L83 1435 aa15.61■□□□□ 0.09
CD4-201ENST00000011653 KDM5BQ9UGL1 1544 aa15.61■□□□□ 0.09
CD4-201ENST00000011653 MYT1LQ9UL68 1186 aa15.6■□□□□ 0.09
CD4-201ENST00000011653 UHRF1BP1LA0JNW5 1464 aa15.59■□□□□ 0.09
CD4-201ENST00000011653 GPATCH8Q9UKJ3 1502 aaKnown RBP15.58■□□□□ 0.08
CD4-201ENST00000011653 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
CD4-201ENST00000011653 PTPN23Q9H3S7 1636 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms