RNA–Protein interactions for RNA: ENSMUST00000218866.1

Smc6-208, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

TSL 1 (best) BASIC

Gene Smc6, Length 3,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-208ENSMUST00000218866 Calr4Q3TQS0 420 aa19.18■□□□□ 0.66
Smc6-208ENSMUST00000218866 Bcl11aQ9QYE3 773 aa19.18■□□□□ 0.66
Smc6-208ENSMUST00000218866 Eif4g1Q6NZJ6 1600 aaKnown RBP19.17■□□□□ 0.66
Smc6-208ENSMUST00000218866 Eif5bQ05D44 1216 aaKnown RBP19.16■□□□□ 0.66
Smc6-208ENSMUST00000218866 Kdm5bQ80Y84 1544 aa19.16■□□□□ 0.66
Smc6-208ENSMUST00000218866 Iqgap2Q3UQ44 1575 aa19.14■□□□□ 0.65
Smc6-208ENSMUST00000218866 Ccdc18Q640L5 1455 aa19.13■□□□□ 0.65
Smc6-208ENSMUST00000218866 Arhgef5E9Q7D5 1581 aa19.12■□□□□ 0.65
Smc6-208ENSMUST00000218866 AqrQ8CFQ3 1481 aaKnown RBP19.11■□□□□ 0.65
Smc6-208ENSMUST00000218866 Ifnlr1Q8CGK5 535 aa19.1■□□□□ 0.65
Smc6-208ENSMUST00000218866 Kif15Q6P9L6 1387 aa19.05■□□□□ 0.64
Smc6-208ENSMUST00000218866 Naip1Q9QWK5 1403 aa19.04■□□□□ 0.64
Smc6-208ENSMUST00000218866 Ppp4r2Q0VGB7 417 aa19.01■□□□□ 0.63
Smc6-208ENSMUST00000218866 Chic2Q9D9G3 165 aa19.01■□□□□ 0.63
Smc6-208ENSMUST00000218866 Gm13697A2AK42 830 aa19■□□□□ 0.63
Smc6-208ENSMUST00000218866 NrkQ9R0G8 1455 aa19■□□□□ 0.63
Smc6-208ENSMUST00000218866 P3h3Q8CG70 732 aa19■□□□□ 0.63
Smc6-208ENSMUST00000218866 Tiam1Q60610 1591 aa18.96■□□□□ 0.63
Smc6-208ENSMUST00000218866 Supt16hQ920B9 1047 aa18.93■□□□□ 0.62
Smc6-208ENSMUST00000218866 Shroom4Q1W617 1475 aa18.92■□□□□ 0.62
Smc6-208ENSMUST00000218866 Atad2bE9Q166 1460 aaKnown RBP18.9■□□□□ 0.62
Smc6-208ENSMUST00000218866 3425401B19RikD3Z1D3 1412 aa18.89■□□□□ 0.61
Smc6-208ENSMUST00000218866 Mrs2Q5NCE8 434 aa18.87■□□□□ 0.61
Smc6-208ENSMUST00000218866 Dhx29Q6PGC1 1365 aaKnown RBP18.86■□□□□ 0.61
Smc6-208ENSMUST00000218866 Slx4Q6P1D7 1565 aa18.86■□□□□ 0.61
Smc6-208ENSMUST00000218866 TnnQ80Z71 1560 aa18.86■□□□□ 0.61
Smc6-208ENSMUST00000218866 Smg6P61406 1418 aaKnown RBP18.85■□□□□ 0.61
Smc6-208ENSMUST00000218866 Ttbk1Q6PCN3 1308 aa18.85■□□□□ 0.61
Smc6-208ENSMUST00000218866 Wdr43Q6ZQL4 677 aaKnown RBP18.85■□□□□ 0.61
Smc6-208ENSMUST00000218866 Wwc2Q6NXJ0 1187 aa18.84■□□□□ 0.61
Smc6-208ENSMUST00000218866 Ccer2J3QPU5 274 aa18.84■□□□□ 0.61
Smc6-208ENSMUST00000218866 UacaQ8CGB3 1411 aa18.82■□□□□ 0.6
Smc6-208ENSMUST00000218866 TchhA0A0B4J1F9 1599 aa18.81■□□□□ 0.6
Smc6-208ENSMUST00000218866 Mroh2bQ7M6Y6 1581 aa18.8■□□□□ 0.6
Smc6-208ENSMUST00000218866 Slc4a3P16283 1227 aa18.8■□□□□ 0.6
Smc6-208ENSMUST00000218866 Pcf11G3X9Z4 1553 aa18.79■□□□□ 0.6
Smc6-208ENSMUST00000218866 Pelp1Q9DBD5 1123 aaKnown RBP18.79■□□□□ 0.6
Smc6-208ENSMUST00000218866 Ankrd26Q811D2 1581 aa18.78■□□□□ 0.6
Smc6-208ENSMUST00000218866 Map3k1P53349 1493 aa18.78■□□□□ 0.6
Smc6-208ENSMUST00000218866 PrkcshO08795 521 aa18.78■□□□□ 0.6
Smc6-208ENSMUST00000218866 Frmpd1A2AKB4 1549 aa18.78■□□□□ 0.6
Smc6-208ENSMUST00000218866 Pak3Q61036 559 aa18.78■□□□□ 0.6
Smc6-208ENSMUST00000218866 Aebp1Q640N1 1128 aa18.77■□□□□ 0.6
Smc6-208ENSMUST00000218866 Mia2Q91ZV0 1396 aa18.76■□□□□ 0.59
Smc6-208ENSMUST00000218866 Npm1Q61937 292 aaKnown RBP18.76■□□□□ 0.59
Smc6-208ENSMUST00000218866 CntlnA2AM05 1397 aa18.76■□□□□ 0.59
Smc6-208ENSMUST00000218866 NrdcQ8BHG1 1161 aa18.76■□□□□ 0.59
Smc6-208ENSMUST00000218866 Fhad1A6PWD2 1420 aa18.74■□□□□ 0.59
Smc6-208ENSMUST00000218866 Fyco1Q8VDC1 1437 aa18.72■□□□□ 0.59
Smc6-208ENSMUST00000218866 Grin2bQ01097 1482 aa18.72■□□□□ 0.59
Smc6-208ENSMUST00000218866 Pds5bQ4VA53 1446 aaKnown RBP18.72■□□□□ 0.59
Smc6-208ENSMUST00000218866 Rtl5Q5DTT4 599 aa18.72■□□□□ 0.59
Smc6-208ENSMUST00000218866 Slc4a2P13808 1237 aaKnown RBP18.71■□□□□ 0.59
Smc6-208ENSMUST00000218866 Camsap1A2AHC3 1581 aa18.71■□□□□ 0.59
Smc6-208ENSMUST00000218866 Ankrd36D3Z4K0 1415 aa18.71■□□□□ 0.59
Smc6-208ENSMUST00000218866 Exoc6Q8R313 802 aa18.7■□□□□ 0.58
Smc6-208ENSMUST00000218866 Cux1P53564 1515 aa18.69■□□□□ 0.58
Smc6-208ENSMUST00000218866 Washc2Q6PGL7 1334 aa18.69■□□□□ 0.58
Smc6-208ENSMUST00000218866 Lamc3Q9R0B6 1581 aa18.68■□□□□ 0.58
Smc6-208ENSMUST00000218866 Vps8Q0P5W1 1427 aa18.66■□□□□ 0.58
Smc6-208ENSMUST00000218866 Naip2Q9QUK4 1447 aa18.64■□□□□ 0.58
Smc6-208ENSMUST00000218866 Mphosph9A6H5Y1 991 aa18.64■□□□□ 0.58
Smc6-208ENSMUST00000218866 Carmil1Q6EDY6 1374 aa18.63■□□□□ 0.57
Smc6-208ENSMUST00000218866 Naip5Q9R016 1403 aa18.63■□□□□ 0.57
Smc6-208ENSMUST00000218866 Gm7298A0A0N4SVU1 1476 aa18.61■□□□□ 0.57
Smc6-208ENSMUST00000218866 Zfp644E9QA22 1323 aa18.61■□□□□ 0.57
Smc6-208ENSMUST00000218866 Liat1Q810M6 228 aa18.6■□□□□ 0.57
Smc6-208ENSMUST00000218866 Kcnh8P59111 1102 aa18.6■□□□□ 0.57
Smc6-208ENSMUST00000218866 Ccnb3Q810T2 1396 aa18.6■□□□□ 0.57
Smc6-208ENSMUST00000218866 Wdr62Q3U3T8 1523 aa18.6■□□□□ 0.57
Smc6-208ENSMUST00000218866 Erich3F6QRE9 1637 aa18.59■□□□□ 0.57
Smc6-208ENSMUST00000218866 Ubl4bQ9CQ84 188 aa18.59■□□□□ 0.57
Smc6-208ENSMUST00000218866 Efcab5A0JP43 1406 aa18.58■□□□□ 0.57
Smc6-208ENSMUST00000218866 A2mQ6GQT1 1474 aa18.58■□□□□ 0.57
Smc6-208ENSMUST00000218866 Pkd2O35245 966 aa18.55■□□□□ 0.56
Smc6-208ENSMUST00000218866 Cabp1Q9JLK7 227 aa18.55■□□□□ 0.56
Smc6-208ENSMUST00000218866 Cux2P70298 1426 aa18.54■□□□□ 0.56
Smc6-208ENSMUST00000218866 Ncoa2Q61026 1462 aa18.54■□□□□ 0.56
Smc6-208ENSMUST00000218866 Gm1043A0A140LJC2 1431 aa18.53■□□□□ 0.56
Smc6-208ENSMUST00000218866 Ofd1Q80Z25 1017 aa18.52■□□□□ 0.56
Smc6-208ENSMUST00000218866 Lmo7E9PYF4 1699 aaKnown RBP18.51■□□□□ 0.55
Smc6-208ENSMUST00000218866 Gm13695A2AK44 830 aa18.5■□□□□ 0.55
Smc6-208ENSMUST00000218866 Zbtb4Q5F293 982 aa18.5■□□□□ 0.55
Smc6-208ENSMUST00000218866 Egfem1Q8C088 590 aa18.49■□□□□ 0.55
Smc6-208ENSMUST00000218866 Rgl3Q3UYI5 709 aa18.49■□□□□ 0.55
Smc6-208ENSMUST00000218866 Ercc6F8VPZ5 1481 aa18.49■□□□□ 0.55
Smc6-208ENSMUST00000218866 Usp47Q8BY87 1376 aa18.49■□□□□ 0.55
Smc6-208ENSMUST00000218866 Dennd4bQ3U1Y4 1499 aa18.48■□□□□ 0.55
Smc6-208ENSMUST00000218866 Urb2E9Q7L1 1524 aaKnown RBP18.46■□□□□ 0.55
Smc6-208ENSMUST00000218866 LrpprcQ6PB66 1392 aaKnown RBP18.46■□□□□ 0.55
Smc6-208ENSMUST00000218866 Arhgap27A2AB59 869 aa18.45■□□□□ 0.54
Smc6-208ENSMUST00000218866 Rad54l2Q99NG0 1466 aa18.44■□□□□ 0.54
Smc6-208ENSMUST00000218866 PnisrA2AJT4 805 aaKnown RBP18.43■□□□□ 0.54
Smc6-208ENSMUST00000218866 Duox2A2AQ99 1517 aa18.42■□□□□ 0.54
Smc6-208ENSMUST00000218866 Crocc2F6XLV1 1638 aa18.42■□□□□ 0.54
Smc6-208ENSMUST00000218866 L3mbtl2P59178 703 aa18.41■□□□□ 0.54
Smc6-208ENSMUST00000218866 Camsap2Q8C1B1 1461 aa18.4■□□□□ 0.54
Smc6-208ENSMUST00000218866 Ncoa1P70365 1447 aa18.39■□□□□ 0.54
Smc6-208ENSMUST00000218866 Grwd1Q810D6 446 aaKnown RBP18.39■□□□□ 0.54
Smc6-208ENSMUST00000218866 Kif27Q7M6Z4 1394 aa18.38■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms