RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Duox2A2AQ99 1517 aa15.52■□□□□ 0.07
Ptpre-208ENSMUST00000211788 AqrQ8CFQ3 1481 aaKnown RBP15.5■□□□□ 0.07
Ptpre-208ENSMUST00000211788 Ankrd26Q811D2 1581 aa15.48■□□□□ 0.07
Ptpre-208ENSMUST00000211788 Ncapd3Q6ZQK0 1506 aa15.48■□□□□ 0.07
Ptpre-208ENSMUST00000211788 Erich3F6QRE9 1637 aa15.46■□□□□ 0.06
Ptpre-208ENSMUST00000211788 Carmil1Q6EDY6 1374 aa15.45■□□□□ 0.06
Ptpre-208ENSMUST00000211788 Dhx29Q6PGC1 1365 aaKnown RBP15.45■□□□□ 0.06
Ptpre-208ENSMUST00000211788 Tiam1Q60610 1591 aa15.44■□□□□ 0.06
Ptpre-208ENSMUST00000211788 Pcf11G3X9Z4 1553 aa15.42■□□□□ 0.06
Ptpre-208ENSMUST00000211788 Samd9lQ69Z37 1561 aa15.42■□□□□ 0.06
Ptpre-208ENSMUST00000211788 Cux1P53564 1515 aa15.41■□□□□ 0.06
Ptpre-208ENSMUST00000211788 Naip1Q9QWK5 1403 aa15.41■□□□□ 0.06
Ptpre-208ENSMUST00000211788 BlmO88700 1416 aa15.4■□□□□ 0.06
Ptpre-208ENSMUST00000211788 SynmQ70IV5 1561 aa15.39■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Mrc2Q64449 1479 aa15.36■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Rad54l2Q99NG0 1466 aa15.36■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Amer1Q7TS75 1132 aa15.36■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Dnajc5bQ9CQ94 199 aa15.36■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Slx4Q6P1D7 1565 aa15.36■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Lmo7E9PYF4 1699 aaKnown RBP15.36■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Kif21aQ9QXL2 1672 aa15.36■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Sall2Q9QX96 1004 aa15.35■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Crocc2F6XLV1 1638 aa15.35■□□□□ 0.05
Ptpre-208ENSMUST00000211788 Lmod2Q3UHZ5 550 aa15.33■□□□□ 0.04
Ptpre-208ENSMUST00000211788 TonslQ6NZL6 1363 aa15.32■□□□□ 0.04
Ptpre-208ENSMUST00000211788 Urb2E9Q7L1 1524 aaKnown RBP15.32■□□□□ 0.04
Ptpre-208ENSMUST00000211788 Fyco1Q8VDC1 1437 aa15.31■□□□□ 0.04
Ptpre-208ENSMUST00000211788 CntlnA2AM05 1397 aa15.31■□□□□ 0.04
Ptpre-208ENSMUST00000211788 Wdr66E9Q743 1299 aa15.3■□□□□ 0.04
Ptpre-208ENSMUST00000211788 Aebp2Q9Z248 504 aaKnown RBP15.28■□□□□ 0.04
Ptpre-208ENSMUST00000211788 Polr1aO35134 1717 aaKnown RBP15.28■□□□□ 0.04
Ptpre-208ENSMUST00000211788 Aebp1Q640N1 1128 aa15.26■□□□□ 0.03
Ptpre-208ENSMUST00000211788 Kdm5bQ80Y84 1544 aa15.25■□□□□ 0.03
Ptpre-208ENSMUST00000211788 Pla2r1Q62028 1487 aa15.23■□□□□ 0.03
Ptpre-208ENSMUST00000211788 Rpap1Q80TE0 1409 aa15.23■□□□□ 0.03
Ptpre-208ENSMUST00000211788 TchhA0A0B4J1F9 1599 aa15.22■□□□□ 0.03
Ptpre-208ENSMUST00000211788 Peg3Q3URU2 1571 aa15.22■□□□□ 0.03
Ptpre-208ENSMUST00000211788 EprsQ8CGC7 1512 aaKnown RBP15.22■□□□□ 0.03
Ptpre-208ENSMUST00000211788 Plb1Q3TTY0 1478 aa15.22■□□□□ 0.03
Ptpre-208ENSMUST00000211788 Eid3Q3V124 375 aa15.21■□□□□ 0.03
Ptpre-208ENSMUST00000211788 Fam50aQ9WV03 339 aaKnown RBP15.21■□□□□ 0.03
Ptpre-208ENSMUST00000211788 Magi3Q9EQJ9 1476 aa15.2■□□□□ 0.02
Ptpre-208ENSMUST00000211788 Cdk11bP24788 784 aaKnown RBP15.18■□□□□ 0.02
Ptpre-208ENSMUST00000211788 Grin2aP35436 1464 aa15.17■□□□□ 0.02
Ptpre-208ENSMUST00000211788 Gm1043A0A140LJC2 1431 aa15.17■□□□□ 0.02
Ptpre-208ENSMUST00000211788 3425401B19RikD3Z1D3 1412 aa15.17■□□□□ 0.02
Ptpre-208ENSMUST00000211788 Rtl5Q5DTT4 599 aa15.16■□□□□ 0.02
Ptpre-208ENSMUST00000211788 ClspnQ80YR7 1315 aa15.16■□□□□ 0.02
Ptpre-208ENSMUST00000211788 CadpsQ80TJ1 1355 aa15.15■□□□□ 0.02
Ptpre-208ENSMUST00000211788 Disp1Q3TDN0 1521 aa15.14■□□□□ 0.01
Ptpre-208ENSMUST00000211788 Ppargc1bQ8VHJ7 1014 aa15.14■□□□□ 0.01
Ptpre-208ENSMUST00000211788 Gm7298A0A0N4SVU1 1476 aa15.13■□□□□ 0.01
Ptpre-208ENSMUST00000211788 Abca5Q8K448 1642 aa15.12■□□□□ 0.01
Ptpre-208ENSMUST00000211788 Gpatch8A2A6A1 1505 aa15.11■□□□□ 0.01
Ptpre-208ENSMUST00000211788 WizO88286 1684 aaKnown RBP15.1■□□□□ 0.01
Ptpre-208ENSMUST00000211788 PrkcshO08795 521 aa15.09■□□□□ 0.01
Ptpre-208ENSMUST00000211788 Kif27Q7M6Z4 1394 aa15.08■□□□□ 0
Ptpre-208ENSMUST00000211788 Adamts12Q811B3 1600 aa15.08■□□□□ 0
Ptpre-208ENSMUST00000211788 Setd1bQ8CFT2 1985 aa15.06■□□□□ 0
Ptpre-208ENSMUST00000211788 Ccnb3Q810T2 1396 aa15.05■□□□□ -0
Ptpre-208ENSMUST00000211788 Mia2Q91ZV0 1396 aa15.05■□□□□ -0
Ptpre-208ENSMUST00000211788 Ift140E9PY46 1464 aa15.05■□□□□ -0
Ptpre-208ENSMUST00000211788 PxdnQ3UQ28 1475 aa15.05■□□□□ -0
Ptpre-208ENSMUST00000211788 Fhad1A6PWD2 1420 aa15.04■□□□□ -0
Ptpre-208ENSMUST00000211788 Nop58Q6DFW4 536 aaKnown RBP15.04■□□□□ -0
Ptpre-208ENSMUST00000211788 Soga1E1U8D0 1418 aa15.03■□□□□ -0
Ptpre-208ENSMUST00000211788 Naip2Q9QUK4 1447 aa15.02□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Nup160Q9Z0W3 1402 aaKnown RBP15.01□□□□□ -0.01
Ptpre-208ENSMUST00000211788 A2mQ6GQT1 1474 aa15.01□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Vps8Q0P5W1 1427 aa15□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Lmtk2Q3TYD6 1471 aa15□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Abca16E9PWJ7 1678 aa15□□□□□ -0.01
Ptpre-208ENSMUST00000211788 BC005561E9Q5E2 1589 aa14.98□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Pbrm1Q8BSQ9 1634 aaKnown RBP14.98□□□□□ -0.01
Ptpre-208ENSMUST00000211788 WrnO09053 1401 aa14.98□□□□□ -0.01
Ptpre-208ENSMUST00000211788 NexmifQ5DTT1 1515 aa14.98□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Lrriq1Q0P5X1 1673 aa14.98□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Chic2Q9D9G3 165 aa14.98□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Arhgap27A2AB59 869 aa14.97□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Ccer2J3QPU5 274 aa14.97□□□□□ -0.01
Ptpre-208ENSMUST00000211788 Fam71e1A1L3C1 212 aa14.95□□□□□ -0.02
Ptpre-208ENSMUST00000211788 Tnnt3Q9QZ47 272 aa14.95□□□□□ -0.02
Ptpre-208ENSMUST00000211788 Ube2uB1AUC4 352 aa14.94□□□□□ -0.02
Ptpre-208ENSMUST00000211788 Gcc2Q8CHG3 1679 aa14.93□□□□□ -0.02
Ptpre-208ENSMUST00000211788 Ankrd36D3Z4K0 1415 aa14.93□□□□□ -0.02
Ptpre-208ENSMUST00000211788 Cc2d2bA0A286YDU8 1405 aa14.91□□□□□ -0.02
Ptpre-208ENSMUST00000211788 Hspa5P20029 655 aaKnown RBP14.91□□□□□ -0.02
Ptpre-208ENSMUST00000211788 Abcc2Q8VI47 1543 aa14.89□□□□□ -0.03
Ptpre-208ENSMUST00000211788 Mug1P28665 1476 aa14.88□□□□□ -0.03
Ptpre-208ENSMUST00000211788 Ncoa3O09000 1398 aa14.88□□□□□ -0.03
Ptpre-208ENSMUST00000211788 NclP09405 707 aaKnown RBP14.88□□□□□ -0.03
Ptpre-208ENSMUST00000211788 Rapgef6Q5NCJ1 1609 aa14.88□□□□□ -0.03
Ptpre-208ENSMUST00000211788 UacaQ8CGB3 1411 aa14.88□□□□□ -0.03
Ptpre-208ENSMUST00000211788 Dennd4bQ3U1Y4 1499 aa14.88□□□□□ -0.03
Ptpre-208ENSMUST00000211788 Shroom2A2ALU4 1481 aa14.88□□□□□ -0.03
Ptpre-208ENSMUST00000211788 Pelp1Q9DBD5 1123 aaKnown RBP14.87□□□□□ -0.03
Ptpre-208ENSMUST00000211788 Cabp1Q9JLK7 227 aa14.82□□□□□ -0.04
Ptpre-208ENSMUST00000211788 Arhgef11Q68FM7 1552 aa14.81□□□□□ -0.04
Ptpre-208ENSMUST00000211788 Arhgap31A6X8Z5 1425 aa14.81□□□□□ -0.04
Ptpre-208ENSMUST00000211788 Arhgef40Q3UPH7 1517 aa14.8□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms