RNA–Protein interactions for RNA: ENSMUST00000210309.1

Usp47-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp47, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-202ENSMUST00000210309 Frmpd1A2AKB4 1549 aa8.38□□□□□ -1.07
Usp47-202ENSMUST00000210309 Prdm10Q3UTQ7 1184 aa8.38□□□□□ -1.07
Usp47-202ENSMUST00000210309 Chic2Q9D9G3 165 aa8.37□□□□□ -1.07
Usp47-202ENSMUST00000210309 Hnrnpul2Q00PI9 745 aaKnown RBP8.35□□□□□ -1.07
Usp47-202ENSMUST00000210309 Aebp1Q640N1 1128 aa8.34□□□□□ -1.07
Usp47-202ENSMUST00000210309 PtprkP35822 1457 aa8.32□□□□□ -1.08
Usp47-202ENSMUST00000210309 Ccer2J3QPU5 274 aa8.32□□□□□ -1.08
Usp47-202ENSMUST00000210309 Efcab5A0JP43 1406 aa8.31□□□□□ -1.08
Usp47-202ENSMUST00000210309 Aebp2Q9Z248 504 aaKnown RBP8.31□□□□□ -1.08
Usp47-202ENSMUST00000210309 Tnnt3Q9QZ47 272 aa8.31□□□□□ -1.08
Usp47-202ENSMUST00000210309 Atp1b4Q99ME6 356 aa8.31□□□□□ -1.08
Usp47-202ENSMUST00000210309 Carmil1Q6EDY6 1374 aa8.3□□□□□ -1.08
Usp47-202ENSMUST00000210309 Nop58Q6DFW4 536 aaKnown RBP8.3□□□□□ -1.08
Usp47-202ENSMUST00000210309 Baz1bQ9Z277 1479 aa8.29□□□□□ -1.08
Usp47-202ENSMUST00000210309 Arhgap27A2AB59 869 aa8.28□□□□□ -1.08
Usp47-202ENSMUST00000210309 ArxO35085 564 aa8.27□□□□□ -1.08
Usp47-202ENSMUST00000210309 ClspnQ80YR7 1315 aa8.27□□□□□ -1.09
Usp47-202ENSMUST00000210309 Mapk8ip2Q9ERE9 830 aa8.27□□□□□ -1.09
Usp47-202ENSMUST00000210309 Erich6D3Z6S9 713 aa8.26□□□□□ -1.09
Usp47-202ENSMUST00000210309 Polr3glQ8R0C0 218 aa8.25□□□□□ -1.09
Usp47-202ENSMUST00000210309 Kif27Q7M6Z4 1394 aa8.24□□□□□ -1.09
Usp47-202ENSMUST00000210309 Rangap1P46061 589 aaKnown RBP8.24□□□□□ -1.09
Usp47-202ENSMUST00000210309 Wdr62Q3U3T8 1523 aa8.22□□□□□ -1.09
Usp47-202ENSMUST00000210309 Cabp1Q9JLK7 227 aa8.22□□□□□ -1.09
Usp47-202ENSMUST00000210309 PogzQ8BZH4 1409 aaKnown RBP8.22□□□□□ -1.09
Usp47-202ENSMUST00000210309 Gm13695A2AK44 830 aa8.21□□□□□ -1.09
Usp47-202ENSMUST00000210309 Top2aQ01320 1528 aaKnown RBP8.21□□□□□ -1.09
Usp47-202ENSMUST00000210309 CntlnA2AM05 1397 aa8.21□□□□□ -1.09
Usp47-202ENSMUST00000210309 Shroom4Q1W617 1475 aa8.21□□□□□ -1.09
Usp47-202ENSMUST00000210309 Myt1Q8CFC2 1127 aa8.21□□□□□ -1.1
Usp47-202ENSMUST00000210309 Duox2A2AQ99 1517 aa8.21□□□□□ -1.1
Usp47-202ENSMUST00000210309 Hspa5P20029 655 aaKnown RBP8.2□□□□□ -1.1
Usp47-202ENSMUST00000210309 NrkQ9R0G8 1455 aa8.2□□□□□ -1.1
Usp47-202ENSMUST00000210309 Arhgap35Q91YM2 1499 aa8.19□□□□□ -1.1
Usp47-202ENSMUST00000210309 Rad54l2Q99NG0 1466 aa8.19□□□□□ -1.1
Usp47-202ENSMUST00000210309 Top2bQ64511 1612 aa8.17□□□□□ -1.1
Usp47-202ENSMUST00000210309 DaxxO35613 739 aa8.17□□□□□ -1.1
Usp47-202ENSMUST00000210309 Rpap1Q80TE0 1409 aa8.16□□□□□ -1.1
Usp47-202ENSMUST00000210309 Grin2bQ01097 1482 aa8.16□□□□□ -1.1
Usp47-202ENSMUST00000210309 Nlrp6Q91WS2 869 aa8.16□□□□□ -1.1
Usp47-202ENSMUST00000210309 DiexfQ8BTT6 772 aaKnown RBP8.15□□□□□ -1.1
Usp47-202ENSMUST00000210309 Mroh2bQ7M6Y6 1581 aa8.15□□□□□ -1.1
Usp47-202ENSMUST00000210309 Naip1Q9QWK5 1403 aa8.15□□□□□ -1.1
Usp47-202ENSMUST00000210309 WrnO09053 1401 aa8.15□□□□□ -1.1
Usp47-202ENSMUST00000210309 Fyco1Q8VDC1 1437 aa8.14□□□□□ -1.11
Usp47-202ENSMUST00000210309 Arid3cA6PWV5 409 aa8.14□□□□□ -1.11
Usp47-202ENSMUST00000210309 Arap1Q4LDD4 1452 aa8.14□□□□□ -1.11
Usp47-202ENSMUST00000210309 Hdac5Q9Z2V6 1113 aa8.14□□□□□ -1.11
Usp47-202ENSMUST00000210309 Mrc2Q64449 1479 aa8.13□□□□□ -1.11
Usp47-202ENSMUST00000210309 CadpsQ80TJ1 1355 aa8.13□□□□□ -1.11
Usp47-202ENSMUST00000210309 Csrnp3P59055 597 aa8.13□□□□□ -1.11
Usp47-202ENSMUST00000210309 Jph4Q80WT0 628 aa8.13□□□□□ -1.11
Usp47-202ENSMUST00000210309 AknaQ80VW7 1404 aa8.13□□□□□ -1.11
Usp47-202ENSMUST00000210309 Mia2Q91ZV0 1396 aa8.12□□□□□ -1.11
Usp47-202ENSMUST00000210309 Ythdc1E9Q5K9 736 aaKnown RBP8.12□□□□□ -1.11
Usp47-202ENSMUST00000210309 Rgl3Q3UYI5 709 aa8.12□□□□□ -1.11
Usp47-202ENSMUST00000210309 Urb2E9Q7L1 1524 aaKnown RBP8.12□□□□□ -1.11
Usp47-202ENSMUST00000210309 Clstn2Q9ER65 966 aa8.11□□□□□ -1.11
Usp47-202ENSMUST00000210309 Ccnb3Q810T2 1396 aa8.11□□□□□ -1.11
Usp47-202ENSMUST00000210309 Map3k1P53349 1493 aa8.11□□□□□ -1.11
Usp47-202ENSMUST00000210309 Pkd2O35245 966 aa8.11□□□□□ -1.11
Usp47-202ENSMUST00000210309 Gm38655A0A286YDK6 273 aa8.1□□□□□ -1.11
Usp47-202ENSMUST00000210309 Plb1Q3TTY0 1478 aa8.1□□□□□ -1.11
Usp47-202ENSMUST00000210309 Mtus2Q3UHD3 1353 aa8.1□□□□□ -1.11
Usp47-202ENSMUST00000210309 Rrp7aQ9D1C9 280 aaKnown RBP8.1□□□□□ -1.11
Usp47-202ENSMUST00000210309 Rtl5Q5DTT4 599 aa8.09□□□□□ -1.11
Usp47-202ENSMUST00000210309 Cc2d2aQ8CFW7 1633 aa8.09□□□□□ -1.11
Usp47-202ENSMUST00000210309 Trak1Q6PD31 939 aa8.09□□□□□ -1.11
Usp47-202ENSMUST00000210309 Camsap1A2AHC3 1581 aa8.08□□□□□ -1.12
Usp47-202ENSMUST00000210309 Lamc3Q9R0B6 1581 aa8.08□□□□□ -1.12
Usp47-202ENSMUST00000210309 Grwd1Q810D6 446 aaKnown RBP8.07□□□□□ -1.12
Usp47-202ENSMUST00000210309 Sart1Q9Z315 806 aaKnown RBP8.07□□□□□ -1.12
Usp47-202ENSMUST00000210309 Tdrd9Q14BI7 1383 aa8.07□□□□□ -1.12
Usp47-202ENSMUST00000210309 Map4P27546 1125 aaKnown RBP8.06□□□□□ -1.12
Usp47-202ENSMUST00000210309 Sin3aQ60520 1274 aaKnown RBP8.06□□□□□ -1.12
Usp47-202ENSMUST00000210309 Mphosph9A6H5Y1 991 aa8.06□□□□□ -1.12
Usp47-202ENSMUST00000210309 Mrs2Q5NCE8 434 aa8.06□□□□□ -1.12
Usp47-202ENSMUST00000210309 CatipB9EKE5 520 aa8.06□□□□□ -1.12
Usp47-202ENSMUST00000210309 EprsQ8CGC7 1512 aaKnown RBP8.04□□□□□ -1.12
Usp47-202ENSMUST00000210309 AqrQ8CFQ3 1481 aaKnown RBP8.04□□□□□ -1.12
Usp47-202ENSMUST00000210309 Fam163aQ8CAA5 168 aa8.02□□□□□ -1.13
Usp47-202ENSMUST00000210309 Vsig10D3YX43 558 aa8.02□□□□□ -1.13
Usp47-202ENSMUST00000210309 Lmod3E9QA62 571 aa8.02□□□□□ -1.13
Usp47-202ENSMUST00000210309 Zfp644E9QA22 1323 aa8.01□□□□□ -1.13
Usp47-202ENSMUST00000210309 Irx6Q9ER75 438 aa8.01□□□□□ -1.13
Usp47-202ENSMUST00000210309 Cux1P53564 1515 aa8□□□□□ -1.13
Usp47-202ENSMUST00000210309 Anks4bQ8K3X6 423 aa8□□□□□ -1.13
Usp47-202ENSMUST00000210309 Arhgef5E9Q7D5 1581 aa8□□□□□ -1.13
Usp47-202ENSMUST00000210309 Lemd3Q9WU40 921 aa8□□□□□ -1.13
Usp47-202ENSMUST00000210309 Fgd6Q69ZL1 1399 aa8□□□□□ -1.13
Usp47-202ENSMUST00000210309 Arhgap31A6X8Z5 1425 aa8□□□□□ -1.13
Usp47-202ENSMUST00000210309 Cc2d2bA0A286YDU8 1405 aa7.99□□□□□ -1.13
Usp47-202ENSMUST00000210309 Mroh3A0A1D5RM54 893 aa7.99□□□□□ -1.13
Usp47-202ENSMUST00000210309 Gm7298A0A0N4SVU1 1476 aa7.99□□□□□ -1.13
Usp47-202ENSMUST00000210309 Soga1E1U8D0 1418 aa7.98□□□□□ -1.13
Usp47-202ENSMUST00000210309 Rad21Q61550 635 aaKnown RBP7.98□□□□□ -1.13
Usp47-202ENSMUST00000210309 Kdm2aP59997 1161 aa7.98□□□□□ -1.13
Usp47-202ENSMUST00000210309 Fhad1A6PWD2 1420 aa7.97□□□□□ -1.13
Usp47-202ENSMUST00000210309 UacaQ8CGB3 1411 aa7.97□□□□□ -1.13
Usp47-202ENSMUST00000210309 Dhx57Q6P5D3 1388 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms