RNA–Protein interactions for RNA: ENSMUST00000190118.1

Gm28231-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28231, Length 2,599 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28231-201ENSMUST00000190118 Gm13695A2AK44 830 aa12.18□□□□□ -0.46
Gm28231-201ENSMUST00000190118 NacadQ5SWP3 1504 aa12.12□□□□□ -0.47
Gm28231-201ENSMUST00000190118 HomezQ80W88 542 aa12.1□□□□□ -0.47
Gm28231-201ENSMUST00000190118 VaspP70460 375 aaKnown RBP12.1□□□□□ -0.47
Gm28231-201ENSMUST00000190118 Kdm5dQ62240 1548 aa12.1□□□□□ -0.47
Gm28231-201ENSMUST00000190118 TprnA2AI08 749 aaKnown RBP12.09□□□□□ -0.47
Gm28231-201ENSMUST00000190118 Slc4a2P13808 1237 aaKnown RBP12.09□□□□□ -0.47
Gm28231-201ENSMUST00000190118 Irf5P56477 497 aa12.08□□□□□ -0.48
Gm28231-201ENSMUST00000190118 Zc3h15Q3TIV5 426 aaKnown RBP12.06□□□□□ -0.48
Gm28231-201ENSMUST00000190118 TraipQ8VIG6 470 aa12.03□□□□□ -0.48
Gm28231-201ENSMUST00000190118 Ccdc96Q9CR92 584 aa12.03□□□□□ -0.48
Gm28231-201ENSMUST00000190118 NclP09405 707 aaKnown RBP12.02□□□□□ -0.49
Gm28231-201ENSMUST00000190118 Noa1Q9JJG9 693 aaKnown RBP12.02□□□□□ -0.49
Gm28231-201ENSMUST00000190118 Samd1D3YXK1 519 aa12.01□□□□□ -0.49
Gm28231-201ENSMUST00000190118 Dhx30Q99PU8 1217 aaKnown RBP12.01□□□□□ -0.49
Gm28231-201ENSMUST00000190118 Arid4bA2CG63 1314 aaKnown RBP12□□□□□ -0.49
Gm28231-201ENSMUST00000190118 Dnajc5bQ9CQ94 199 aa11.99□□□□□ -0.49
Gm28231-201ENSMUST00000190118 Znf316Q6PGE4 1016 aa11.96□□□□□ -0.49
Gm28231-201ENSMUST00000190118 C1qtnf12Q8R2Z0 308 aa11.96□□□□□ -0.49
Gm28231-201ENSMUST00000190118 Cdk11bP24788 784 aaKnown RBP11.95□□□□□ -0.5
Gm28231-201ENSMUST00000190118 Rbm25B2RY56 838 aaKnown RBP11.92□□□□□ -0.5
Gm28231-201ENSMUST00000190118 Hoxd11P23813 323 aa11.92□□□□□ -0.5
Gm28231-201ENSMUST00000190118 Hsp90b1P08113 802 aaKnown RBP11.9□□□□□ -0.5
Gm28231-201ENSMUST00000190118 NefmP08553 848 aa11.9□□□□□ -0.5
Gm28231-201ENSMUST00000190118 Ms4a5Q810P8 197 aa11.89□□□□□ -0.51
Gm28231-201ENSMUST00000190118 Sycp2Q9CUU3 1500 aa11.89□□□□□ -0.51
Gm28231-201ENSMUST00000190118 CenpbP27790 599 aa11.88□□□□□ -0.51
Gm28231-201ENSMUST00000190118 Rimbp2Q80U40 1072 aa11.86□□□□□ -0.51
Gm28231-201ENSMUST00000190118 Pknox2Q8BG99 474 aa11.86□□□□□ -0.51
Gm28231-201ENSMUST00000190118 Dcaf1Q80TR8 1506 aa11.84□□□□□ -0.51
Gm28231-201ENSMUST00000190118 DaxxO35613 739 aa11.84□□□□□ -0.51
Gm28231-201ENSMUST00000190118 Hs1bp3Q3TC93 395 aa11.83□□□□□ -0.52
Gm28231-201ENSMUST00000190118 Rangap1P46061 589 aaKnown RBP11.82□□□□□ -0.52
Gm28231-201ENSMUST00000190118 Irx3P81067 507 aa11.82□□□□□ -0.52
Gm28231-201ENSMUST00000190118 Ak7Q9D2H2 614 aa11.82□□□□□ -0.52
Gm28231-201ENSMUST00000190118 Supt5hO55201 1082 aaKnown RBP11.8□□□□□ -0.52
Gm28231-201ENSMUST00000190118 ChgaP26339 463 aaKnown RBP11.8□□□□□ -0.52
Gm28231-201ENSMUST00000190118 B4galnt3Q6L8S8 986 aa11.79□□□□□ -0.52
Gm28231-201ENSMUST00000190118 1700019A02RikA0A087WPV9 146 aa11.78□□□□□ -0.52
Gm28231-201ENSMUST00000190118 Slc24a1Q91WD8 1130 aa11.77□□□□□ -0.52
Gm28231-201ENSMUST00000190118 Gm38655A0A286YDK6 273 aa11.77□□□□□ -0.53
Gm28231-201ENSMUST00000190118 Spock2Q9ER58 423 aa11.76□□□□□ -0.53
Gm28231-201ENSMUST00000190118 Rsph6aQ8CDR2 708 aa11.75□□□□□ -0.53
Gm28231-201ENSMUST00000190118 BicraF8VPZ9 1578 aa11.74□□□□□ -0.53
Gm28231-201ENSMUST00000190118 Mfap1aC0HKD8 439 aaKnown RBP11.74□□□□□ -0.53
Gm28231-201ENSMUST00000190118 Mfap1bC0HKD9 439 aaKnown RBP11.74□□□□□ -0.53
Gm28231-201ENSMUST00000190118 Gpatch11Q3UFS4 262 aa11.74□□□□□ -0.53
Gm28231-201ENSMUST00000190118 P3h3Q8CG70 732 aa11.74□□□□□ -0.53
Gm28231-201ENSMUST00000190118 Slc7a3P70423 618 aa11.71□□□□□ -0.53
Gm28231-201ENSMUST00000190118 Fam117aQ7TNF9 451 aa11.71□□□□□ -0.53
Gm28231-201ENSMUST00000190118 Secisbp2lQ6A098 1086 aaKnown RBP11.71□□□□□ -0.54
Gm28231-201ENSMUST00000190118 Ncoa4Q5U4H9 625 aa11.7□□□□□ -0.54
Gm28231-201ENSMUST00000190118 Noc3lQ8VI84 807 aaKnown RBP11.68□□□□□ -0.54
Gm28231-201ENSMUST00000190118 Rgl2Q61193 778 aa11.67□□□□□ -0.54
Gm28231-201ENSMUST00000190118 BcanQ61361 883 aa11.67□□□□□ -0.54
Gm28231-201ENSMUST00000190118 Ppp1r37Q8BKR5 712 aa11.67□□□□□ -0.54
Gm28231-201ENSMUST00000190118 Slc24a3Q99PD7 645 aa11.67□□□□□ -0.54
Gm28231-201ENSMUST00000190118 Neurod2Q62414 383 aa11.66□□□□□ -0.54
Gm28231-201ENSMUST00000190118 Map4k4P97820 1233 aaKnown RBP11.65□□□□□ -0.54
Gm28231-201ENSMUST00000190118 Znf692Q3U381 531 aa11.64□□□□□ -0.55
Gm28231-201ENSMUST00000190118 Pkd2O35245 966 aa11.63□□□□□ -0.55
Gm28231-201ENSMUST00000190118 Ric3Q8BPM6 367 aa11.63□□□□□ -0.55
Gm28231-201ENSMUST00000190118 Hmgb1P63158 215 aaKnown RBP11.61□□□□□ -0.55
Gm28231-201ENSMUST00000190118 Rb1cc1Q9ESK9 1588 aa11.6□□□□□ -0.55
Gm28231-201ENSMUST00000190118 Ferd3lQ923Z4 168 aa11.6□□□□□ -0.55
Gm28231-201ENSMUST00000190118 Podxl2Q8CAE9 603 aa11.56□□□□□ -0.56
Gm28231-201ENSMUST00000190118 Bcl2l13P59017 434 aa11.54□□□□□ -0.56
Gm28231-201ENSMUST00000190118 Zfp91Q62511 572 aa11.54□□□□□ -0.56
Gm28231-201ENSMUST00000190118 Brd2Q7JJ13 798 aaKnown RBP11.54□□□□□ -0.56
Gm28231-201ENSMUST00000190118 Bach1P97302 739 aa11.54□□□□□ -0.56
Gm28231-201ENSMUST00000190118 PrimpolQ6P1E7 537 aa11.54□□□□□ -0.56
Gm28231-201ENSMUST00000190118 UncxO08934 530 aa11.53□□□□□ -0.56
Gm28231-201ENSMUST00000190118 Apba2P98084 750 aa11.52□□□□□ -0.57
Gm28231-201ENSMUST00000190118 Trim41Q5NCC3 630 aa11.5□□□□□ -0.57
Gm28231-201ENSMUST00000190118 Ccdc85aQ5SP85 500 aa11.5□□□□□ -0.57
Gm28231-201ENSMUST00000190118 Zcwpw1Q6IR42 630 aa11.5□□□□□ -0.57
Gm28231-201ENSMUST00000190118 Aebp1Q640N1 1128 aa11.49□□□□□ -0.57
Gm28231-201ENSMUST00000190118 Pcgf6Q99NA9 353 aa11.48□□□□□ -0.57
Gm28231-201ENSMUST00000190118 Ythdc1E9Q5K9 736 aaKnown RBP11.47□□□□□ -0.57
Gm28231-201ENSMUST00000190118 Arhgef1Q61210 920 aaKnown RBP11.47□□□□□ -0.57
Gm28231-201ENSMUST00000190118 NrdcQ8BHG1 1161 aa11.46□□□□□ -0.57
Gm28231-201ENSMUST00000190118 Znf330Q922H9 316 aa11.45□□□□□ -0.58
Gm28231-201ENSMUST00000190118 Apbb1Q9QXJ1 710 aa11.45□□□□□ -0.58
Gm28231-201ENSMUST00000190118 Pds5bQ4VA53 1446 aaKnown RBP11.45□□□□□ -0.58
Gm28231-201ENSMUST00000190118 Baz1aO88379 1555 aa11.42□□□□□ -0.58
Gm28231-201ENSMUST00000190118 Exoc8Q6PGF7 716 aa11.42□□□□□ -0.58
Gm28231-201ENSMUST00000190118 Fgd1P52734 960 aa11.41□□□□□ -0.58
Gm28231-201ENSMUST00000190118 Chrna2Q91X60 512 aa11.41□□□□□ -0.58
Gm28231-201ENSMUST00000190118 Mtmr7Q9Z2C9 660 aa11.41□□□□□ -0.58
Gm28231-201ENSMUST00000190118 Thoc2B1AZI6 1594 aaKnown RBP11.4□□□□□ -0.58
Gm28231-201ENSMUST00000190118 Crybg2B7ZCC2 1516 aa11.39□□□□□ -0.59
Gm28231-201ENSMUST00000190118 Tmed8Q3UHI4 326 aa11.38□□□□□ -0.59
Gm28231-201ENSMUST00000190118 Kcnv2Q8CFS6 562 aa11.38□□□□□ -0.59
Gm28231-201ENSMUST00000190118 Ccdc180J3QNE4 1664 aa11.37□□□□□ -0.59
Gm28231-201ENSMUST00000190118 WdpcpQ8C456 722 aa11.36□□□□□ -0.59
Gm28231-201ENSMUST00000190118 MpndQ3TV65 487 aa11.33□□□□□ -0.6
Gm28231-201ENSMUST00000190118 Ccdc136Q3TVA9 1136 aa11.33□□□□□ -0.6
Gm28231-201ENSMUST00000190118 Wwc1Q5SXA9 1104 aa11.33□□□□□ -0.6
Gm28231-201ENSMUST00000190118 Nap1l5Q9JJF0 156 aa11.33□□□□□ -0.6
Gm28231-201ENSMUST00000190118 Clstn1Q9EPL2 979 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms