RNA–Protein interactions for RNA: ENSMUST00000180093.1

Ccr9-205, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-205ENSMUST00000180093 Cttnbp2B9EJA2 1648 aa6.16□□□□□ -1.42
Ccr9-205ENSMUST00000180093 Irx3P81067 507 aa6.16□□□□□ -1.42
Ccr9-205ENSMUST00000180093 Calr4Q3TQS0 420 aa6.16□□□□□ -1.42
Ccr9-205ENSMUST00000180093 A0A286YCP9 139 aa6.16□□□□□ -1.42
Ccr9-205ENSMUST00000180093 Pds5bQ4VA53 1446 aaKnown RBP6.16□□□□□ -1.42
Ccr9-205ENSMUST00000180093 Hsp90aa1P07901 733 aaKnown RBP6.15□□□□□ -1.43
Ccr9-205ENSMUST00000180093 NclP09405 707 aaKnown RBP6.15□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Atad2bE9Q166 1460 aaKnown RBP6.14□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Kcna4Q61423 654 aa6.14□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Plcd4Q8K3R3 807 aa6.14□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Golga3P55937 1487 aa6.14□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Iqgap2Q3UQ44 1575 aa6.13□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Rtn4Q99P72 1162 aaKnown RBP6.13□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Phf23Q8BSN5 401 aa6.13□□□□□ -1.43
Ccr9-205ENSMUST00000180093 NrdcQ8BHG1 1161 aa6.12□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Gtf3c3Q3TMP1 882 aa6.12□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Wdr43Q6ZQL4 677 aaKnown RBP6.1□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Eid3Q3V124 375 aa6.09□□□□□ -1.43
Ccr9-205ENSMUST00000180093 Npm2Q80W85 207 aa6.09□□□□□ -1.43
Ccr9-205ENSMUST00000180093 NeflP08551 543 aa6.09□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Ccdc27Q3V036 639 aa6.09□□□□□ -1.44
Ccr9-205ENSMUST00000180093 IbspQ61711 324 aa6.09□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Cep164Q5DU05 1446 aa6.08□□□□□ -1.44
Ccr9-205ENSMUST00000180093 A030014E15RikA0A1Y7VJV2 120 aa6.08□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Il27Q8K3I6 234 aa6.07□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Ercc6F8VPZ5 1481 aa6.07□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Rsf1E9PWW9 1441 aaKnown RBP6.07□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Upf2A2AT37 1269 aaKnown RBP6.06□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Top2bQ64511 1612 aa6.05□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Ccdc88bQ4QRL3 1481 aa6.05□□□□□ -1.44
Ccr9-205ENSMUST00000180093 P3h3Q8CG70 732 aa6.05□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Ccdc9Q8VC31 543 aaKnown RBP6.05□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Slc4a3P16283 1227 aa6.03□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Wdr62Q3U3T8 1523 aa6.03□□□□□ -1.44
Ccr9-205ENSMUST00000180093 Cc2d2aQ8CFW7 1633 aa6.02□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Supt16hQ920B9 1047 aa6.02□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Frmpd1A2AKB4 1549 aa6.02□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Nolc1E9Q5C9 702 aaKnown RBP6.02□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Spryd3E9Q9B3 442 aa6.01□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Znf692Q3U381 531 aa6.01□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Fam50aQ9WV03 339 aaKnown RBP6.01□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Vsig10D3YX43 558 aa6□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Fmn1Q05860 1466 aa6□□□□□ -1.45
Ccr9-205ENSMUST00000180093 2310050C09RikG5E8Z3 280 aa5.98□□□□□ -1.45
Ccr9-205ENSMUST00000180093 CanxP35564 591 aaKnown RBP5.98□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Anp32bQ9EST5 272 aaKnown RBP5.97□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Thoc2B1AZI6 1594 aaKnown RBP5.97□□□□□ -1.45
Ccr9-205ENSMUST00000180093 Podxl2Q8CAE9 603 aa5.96□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Kif15Q6P9L6 1387 aa5.95□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Fgd1P52734 960 aa5.95□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Phldb1Q6PDH0 1371 aaKnown RBP5.94□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Plekhg3Q4VAC9 1341 aa5.94□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Unc13aQ4KUS2 1712 aa5.94□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Top2aQ01320 1528 aaKnown RBP5.93□□□□□ -1.46
Ccr9-205ENSMUST00000180093 CatipB9EKE5 520 aa5.92□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Ubl4bQ9CQ84 188 aa5.92□□□□□ -1.46
Ccr9-205ENSMUST00000180093 AU015836B2RUM3 263 aa5.92□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Arid4bA2CG63 1314 aaKnown RBP5.92□□□□□ -1.46
Ccr9-205ENSMUST00000180093 TnnQ80Z71 1560 aa5.92□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Lamc3Q9R0B6 1581 aa5.92□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Tnnt2P50752 301 aa5.91□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Trim44Q9QXA7 346 aa5.91□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Mrs2Q5NCE8 434 aa5.91□□□□□ -1.46
Ccr9-205ENSMUST00000180093 Znf316Q6PGE4 1016 aa5.9□□□□□ -1.46
Ccr9-205ENSMUST00000180093 DekQ7TNV0 380 aaKnown RBP5.9□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Dnttip2Q8R2M2 758 aaKnown RBP5.9□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Fam135aQ6NS59 1506 aa5.89□□□□□ -1.47
Ccr9-205ENSMUST00000180093 ChgaP26339 463 aaKnown RBP5.89□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Gtf3c5Q8R2T8 520 aa5.89□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Ccdc18Q640L5 1455 aa5.88□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Zfp777B9EKF4 885 aa5.88□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Znf326O88291 580 aa5.88□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Cux2P70298 1426 aa5.88□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Npm1Q61937 292 aaKnown RBP5.87□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Ipo4Q8VI75 1082 aa5.87□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Trim26Q99PN3 545 aa5.87□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Armcx1Q9CX83 456 aa5.87□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Rapgef2Q8CHG7 1496 aa5.87□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Rad21Q61550 635 aaKnown RBP5.87□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Camsap1A2AHC3 1581 aa5.86□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Dbr1Q923B1 550 aa5.86□□□□□ -1.47
Ccr9-205ENSMUST00000180093 TimelessQ9R1X4 1197 aa5.86□□□□□ -1.47
Ccr9-205ENSMUST00000180093 B4galnt3Q6L8S8 986 aa5.85□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Trim30dE9PWL0 497 aa5.85□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Pak3Q61036 559 aa5.85□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Ccer2J3QPU5 274 aa5.85□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Dnajc5bQ9CQ94 199 aa5.85□□□□□ -1.47
Ccr9-205ENSMUST00000180093 BccipQ9CWI3 316 aa5.85□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Cep162Q6ZQ06 1403 aa5.84□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Vgll3P85442 326 aa5.84□□□□□ -1.47
Ccr9-205ENSMUST00000180093 Rangap1P46061 589 aaKnown RBP5.83□□□□□ -1.48
Ccr9-205ENSMUST00000180093 Ipo9Q91YE6 1041 aa5.83□□□□□ -1.48
Ccr9-205ENSMUST00000180093 Hsp90ab1P11499 724 aaKnown RBP5.82□□□□□ -1.48
Ccr9-205ENSMUST00000180093 Polr3glQ8R0C0 218 aa5.82□□□□□ -1.48
Ccr9-205ENSMUST00000180093 Plcb2A3KGF7 1181 aa5.82□□□□□ -1.48
Ccr9-205ENSMUST00000180093 Senp3Q9EP97 568 aaKnown RBP5.81□□□□□ -1.48
Ccr9-205ENSMUST00000180093 PtprkP35822 1457 aa5.81□□□□□ -1.48
Ccr9-205ENSMUST00000180093 Grin2bQ01097 1482 aa5.81□□□□□ -1.48
Ccr9-205ENSMUST00000180093 Shroom4Q1W617 1475 aa5.81□□□□□ -1.48
Ccr9-205ENSMUST00000180093 NrkQ9R0G8 1455 aa5.8□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms