RNA–Protein interactions for RNA: ENSMUST00000176686.7

Cpsf6-207, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

TSL 1 (best) BASIC

Gene Cpsf6, Length 2,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-207ENSMUST00000176686 Npm1Q61937 292 aaKnown RBP21.94■■□□□ 1.1
Cpsf6-207ENSMUST00000176686 Naip1Q9QWK5 1403 aa21.94■■□□□ 1.1
Cpsf6-207ENSMUST00000176686 Duox2A2AQ99 1517 aa21.93■■□□□ 1.1
Cpsf6-207ENSMUST00000176686 Pcf11G3X9Z4 1553 aa21.93■■□□□ 1.1
Cpsf6-207ENSMUST00000176686 Aebp2Q9Z248 504 aaKnown RBP21.92■■□□□ 1.1
Cpsf6-207ENSMUST00000176686 Lmo7E9PYF4 1699 aaKnown RBP21.91■■□□□ 1.1
Cpsf6-207ENSMUST00000176686 Cux1P53564 1515 aa21.89■■□□□ 1.09
Cpsf6-207ENSMUST00000176686 Lrriq1Q0P5X1 1673 aa21.89■■□□□ 1.09
Cpsf6-207ENSMUST00000176686 Carmil1Q6EDY6 1374 aa21.89■■□□□ 1.09
Cpsf6-207ENSMUST00000176686 TonslQ6NZL6 1363 aa21.88■■□□□ 1.09
Cpsf6-207ENSMUST00000176686 Wdr66E9Q743 1299 aa21.88■■□□□ 1.09
Cpsf6-207ENSMUST00000176686 Slx4Q6P1D7 1565 aa21.87■■□□□ 1.09
Cpsf6-207ENSMUST00000176686 TchhA0A0B4J1F9 1599 aa21.84■■□□□ 1.09
Cpsf6-207ENSMUST00000176686 Samd9lQ69Z37 1561 aa21.84■■□□□ 1.09
Cpsf6-207ENSMUST00000176686 SynmQ70IV5 1561 aa21.8■■□□□ 1.08
Cpsf6-207ENSMUST00000176686 BlmO88700 1416 aa21.8■■□□□ 1.08
Cpsf6-207ENSMUST00000176686 Neurod1Q60867 357 aa21.79■■□□□ 1.08
Cpsf6-207ENSMUST00000176686 Urb2E9Q7L1 1524 aaKnown RBP21.79■■□□□ 1.08
Cpsf6-207ENSMUST00000176686 Dhx29Q6PGC1 1365 aaKnown RBP21.77■■□□□ 1.08
Cpsf6-207ENSMUST00000176686 ClspnQ80YR7 1315 aa21.77■■□□□ 1.08
Cpsf6-207ENSMUST00000176686 CntlnA2AM05 1397 aa21.74■■□□□ 1.07
Cpsf6-207ENSMUST00000176686 Peg3Q3URU2 1571 aa21.72■■□□□ 1.07
Cpsf6-207ENSMUST00000176686 Fyco1Q8VDC1 1437 aa21.69■■□□□ 1.06
Cpsf6-207ENSMUST00000176686 Rad54l2Q99NG0 1466 aa21.69■■□□□ 1.06
Cpsf6-207ENSMUST00000176686 Kif21aQ9QXL2 1672 aa21.66■■□□□ 1.06
Cpsf6-207ENSMUST00000176686 Crocc2F6XLV1 1638 aa21.66■■□□□ 1.06
Cpsf6-207ENSMUST00000176686 Polr1aO35134 1717 aaKnown RBP21.65■■□□□ 1.06
Cpsf6-207ENSMUST00000176686 3425401B19RikD3Z1D3 1412 aa21.64■■□□□ 1.06
Cpsf6-207ENSMUST00000176686 Shroom2A2ALU4 1481 aa21.61■■□□□ 1.05
Cpsf6-207ENSMUST00000176686 Gm1043A0A140LJC2 1431 aa21.61■■□□□ 1.05
Cpsf6-207ENSMUST00000176686 Lmod2Q3UHZ5 550 aa21.6■■□□□ 1.05
Cpsf6-207ENSMUST00000176686 Rpap1Q80TE0 1409 aa21.6■■□□□ 1.05
Cpsf6-207ENSMUST00000176686 Aebp1Q640N1 1128 aa21.59■■□□□ 1.05
Cpsf6-207ENSMUST00000176686 Eid3Q3V124 375 aa21.59■■□□□ 1.05
Cpsf6-207ENSMUST00000176686 Pla2r1Q62028 1487 aa21.57■■□□□ 1.04
Cpsf6-207ENSMUST00000176686 EprsQ8CGC7 1512 aaKnown RBP21.54■■□□□ 1.04
Cpsf6-207ENSMUST00000176686 Ppargc1bQ8VHJ7 1014 aa21.53■■□□□ 1.04
Cpsf6-207ENSMUST00000176686 Magi3Q9EQJ9 1476 aa21.53■■□□□ 1.04
Cpsf6-207ENSMUST00000176686 Col17a1Q07563 1470 aa21.53■■□□□ 1.04
Cpsf6-207ENSMUST00000176686 Eif4g3Q80XI3 1579 aaKnown RBP21.51■■□□□ 1.03
Cpsf6-207ENSMUST00000176686 Gm7298A0A0N4SVU1 1476 aa21.5■■□□□ 1.03
Cpsf6-207ENSMUST00000176686 Abca5Q8K448 1642 aa21.48■■□□□ 1.03
Cpsf6-207ENSMUST00000176686 Fam50aQ9WV03 339 aaKnown RBP21.47■■□□□ 1.03
Cpsf6-207ENSMUST00000176686 CadpsQ80TJ1 1355 aa21.46■■□□□ 1.03
Cpsf6-207ENSMUST00000176686 Nop58Q6DFW4 536 aaKnown RBP21.46■■□□□ 1.03
Cpsf6-207ENSMUST00000176686 Fhad1A6PWD2 1420 aa21.46■■□□□ 1.03
Cpsf6-207ENSMUST00000176686 Gpatch8A2A6A1 1505 aa21.45■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Cdk11bP24788 784 aaKnown RBP21.45■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Grin2aP35436 1464 aa21.44■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Anks4bQ8K3X6 423 aa21.44■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Plb1Q3TTY0 1478 aa21.43■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Naip2Q9QUK4 1447 aa21.43■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Disp1Q3TDN0 1521 aa21.42■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Mia2Q91ZV0 1396 aa21.4■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Lmtk2Q3TYD6 1471 aa21.39■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Setd1bQ8CFT2 1985 aa21.39■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Adamts12Q811B3 1600 aa21.39■■□□□ 1.02
Cpsf6-207ENSMUST00000176686 Vps8Q0P5W1 1427 aa21.39■■□□□ 1.01
Cpsf6-207ENSMUST00000176686 WizO88286 1684 aaKnown RBP21.38■■□□□ 1.01
Cpsf6-207ENSMUST00000176686 A2mQ6GQT1 1474 aa21.37■■□□□ 1.01
Cpsf6-207ENSMUST00000176686 Ccer2J3QPU5 274 aa21.35■■□□□ 1.01
Cpsf6-207ENSMUST00000176686 Ankrd36D3Z4K0 1415 aa21.33■■□□□ 1
Cpsf6-207ENSMUST00000176686 Ccnb3Q810T2 1396 aa21.32■■□□□ 1
Cpsf6-207ENSMUST00000176686 Pabpn1Q8CCS6 302 aaKnown RBP21.32■■□□□ 1
Cpsf6-207ENSMUST00000176686 Dennd4bQ3U1Y4 1499 aa21.31■■□□□ 1
Cpsf6-207ENSMUST00000176686 Soga1E1U8D0 1418 aa21.3■■□□□ 1
Cpsf6-207ENSMUST00000176686 Kif27Q7M6Z4 1394 aa21.29■■□□□ 1
Cpsf6-207ENSMUST00000176686 PxdnQ3UQ28 1475 aa21.29■■□□□ 1
Cpsf6-207ENSMUST00000176686 Gcc2Q8CHG3 1679 aa21.28■■□□□ 1
Cpsf6-207ENSMUST00000176686 UacaQ8CGB3 1411 aa21.27■■□□□ 1
Cpsf6-207ENSMUST00000176686 BC005561E9Q5E2 1589 aa21.26■□□□□ 0.99
Cpsf6-207ENSMUST00000176686 Abca16E9PWJ7 1678 aa21.26■□□□□ 0.99
Cpsf6-207ENSMUST00000176686 NexmifQ5DTT1 1515 aa21.25■□□□□ 0.99
Cpsf6-207ENSMUST00000176686 Nup160Q9Z0W3 1402 aaKnown RBP21.23■□□□□ 0.99
Cpsf6-207ENSMUST00000176686 Pbrm1Q8BSQ9 1634 aaKnown RBP21.21■□□□□ 0.99
Cpsf6-207ENSMUST00000176686 Hspa5P20029 655 aaKnown RBP21.21■□□□□ 0.99
Cpsf6-207ENSMUST00000176686 Ift140E9PY46 1464 aa21.21■□□□□ 0.99
Cpsf6-207ENSMUST00000176686 Pelp1Q9DBD5 1123 aaKnown RBP21.2■□□□□ 0.98
Cpsf6-207ENSMUST00000176686 Fhod3Q76LL6 1578 aa21.18■□□□□ 0.98
Cpsf6-207ENSMUST00000176686 Cul7Q8VE73 1689 aa21.17■□□□□ 0.98
Cpsf6-207ENSMUST00000176686 NclP09405 707 aaKnown RBP21.17■□□□□ 0.98
Cpsf6-207ENSMUST00000176686 Chic2Q9D9G3 165 aa21.15■□□□□ 0.98
Cpsf6-207ENSMUST00000176686 WrnO09053 1401 aa21.13■□□□□ 0.97
Cpsf6-207ENSMUST00000176686 Ncoa3O09000 1398 aa21.12■□□□□ 0.97
Cpsf6-207ENSMUST00000176686 Abcc2Q8VI47 1543 aa21.11■□□□□ 0.97
Cpsf6-207ENSMUST00000176686 Mug1P28665 1476 aa21.11■□□□□ 0.97
Cpsf6-207ENSMUST00000176686 Rapgef6Q5NCJ1 1609 aa21.1■□□□□ 0.97
Cpsf6-207ENSMUST00000176686 Pcdh10E9PXQ7 1057 aa21.1■□□□□ 0.97
Cpsf6-207ENSMUST00000176686 Ube2uB1AUC4 352 aa21.09■□□□□ 0.97
Cpsf6-207ENSMUST00000176686 Camsap2Q8C1B1 1461 aa21.08■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Naip5Q9R016 1403 aa21.07■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Rfx7F8VPJ6 1459 aa21.07■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Ncoa2Q61026 1462 aa21.07■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Setbp1Q9Z180 1582 aa21.05■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Csrnp3P59055 597 aa21.04■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Arhgef40Q3UPH7 1517 aa21.04■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Arhgef11Q68FM7 1552 aa21.04■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Abcc5Q9R1X5 1436 aa21.03■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Cdc42bpaQ3UU96 1719 aa21.03■□□□□ 0.96
Cpsf6-207ENSMUST00000176686 Cc2d2bA0A286YDU8 1405 aa21.02■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms