RNA–Protein interactions for RNA: ENSMUST00000176172.7

Cux1-206, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 4,882 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-206ENSMUST00000176172 Plppr3Q7TPB0 716 aa22.44■■□□□ 1.18
Cux1-206ENSMUST00000176172 Baz1aO88379 1555 aa22.42■■□□□ 1.18
Cux1-206ENSMUST00000176172 ArxO35085 564 aa22.41■■□□□ 1.18
Cux1-206ENSMUST00000176172 Wdr43Q6ZQL4 677 aaKnown RBP22.37■■□□□ 1.17
Cux1-206ENSMUST00000176172 Eea1Q8BL66 1411 aa22.35■■□□□ 1.17
Cux1-206ENSMUST00000176172 Rgl3Q3UYI5 709 aa22.35■■□□□ 1.17
Cux1-206ENSMUST00000176172 DiexfQ8BTT6 772 aaKnown RBP22.32■■□□□ 1.16
Cux1-206ENSMUST00000176172 Rangap1P46061 589 aaKnown RBP22.3■■□□□ 1.16
Cux1-206ENSMUST00000176172 Ccdc18Q640L5 1455 aa22.28■■□□□ 1.16
Cux1-206ENSMUST00000176172 Safb2Q80YR5 991 aaKnown RBP22.25■■□□□ 1.15
Cux1-206ENSMUST00000176172 Aebp2Q9Z248 504 aaKnown RBP22.19■■□□□ 1.14
Cux1-206ENSMUST00000176172 Ercc6F8VPZ5 1481 aa22.19■■□□□ 1.14
Cux1-206ENSMUST00000176172 P3h3Q8CG70 732 aa22.15■■□□□ 1.14
Cux1-206ENSMUST00000176172 Arhgap27A2AB59 869 aa22.14■■□□□ 1.14
Cux1-206ENSMUST00000176172 Cwc22Q8C5N3 908 aaKnown RBP22.14■■□□□ 1.14
Cux1-206ENSMUST00000176172 Fgd1P52734 960 aa22.14■■□□□ 1.13
Cux1-206ENSMUST00000176172 Mroh3A0A1D5RM54 893 aa22.12■■□□□ 1.13
Cux1-206ENSMUST00000176172 Ofd1Q80Z25 1017 aa22.12■■□□□ 1.13
Cux1-206ENSMUST00000176172 Grwd1Q810D6 446 aaKnown RBP22.12■■□□□ 1.13
Cux1-206ENSMUST00000176172 IqubQ8CDK3 788 aa22.11■■□□□ 1.13
Cux1-206ENSMUST00000176172 Kdm2aP59997 1161 aa22.11■■□□□ 1.13
Cux1-206ENSMUST00000176172 Card11Q8CIS0 1159 aa22.09■■□□□ 1.13
Cux1-206ENSMUST00000176172 Srpk2O54781 681 aaKnown RBP22.07■■□□□ 1.12
Cux1-206ENSMUST00000176172 Mtus2Q3UHD3 1353 aa22.05■■□□□ 1.12
Cux1-206ENSMUST00000176172 Mia2Q91ZV0 1396 aa22.04■■□□□ 1.12
Cux1-206ENSMUST00000176172 Trim26Q99PN3 545 aa22.04■■□□□ 1.12
Cux1-206ENSMUST00000176172 Rrp7aQ9D1C9 280 aaKnown RBP22.01■■□□□ 1.11
Cux1-206ENSMUST00000176172 Gm20521D3Z5F7 333 aa22.01■■□□□ 1.11
Cux1-206ENSMUST00000176172 Trim30dE9PWL0 497 aa21.98■■□□□ 1.11
Cux1-206ENSMUST00000176172 Ccdc9Q8VC31 543 aaKnown RBP21.97■■□□□ 1.11
Cux1-206ENSMUST00000176172 Exosc9Q9JHI7 438 aaKnown RBP21.97■■□□□ 1.11
Cux1-206ENSMUST00000176172 CanxP35564 591 aaKnown RBP21.96■■□□□ 1.11
Cux1-206ENSMUST00000176172 Kdm5dQ62240 1548 aa21.94■■□□□ 1.1
Cux1-206ENSMUST00000176172 Hsp90ab1P11499 724 aaKnown RBP21.92■■□□□ 1.1
Cux1-206ENSMUST00000176172 DekQ7TNV0 380 aaKnown RBP21.91■■□□□ 1.1
Cux1-206ENSMUST00000176172 Hsp90aa1P07901 733 aaKnown RBP21.91■■□□□ 1.1
Cux1-206ENSMUST00000176172 Mapk8ip3Q9ESN9 1337 aa21.87■■□□□ 1.09
Cux1-206ENSMUST00000176172 Zfp777B9EKF4 885 aa21.83■■□□□ 1.09
Cux1-206ENSMUST00000176172 Hspa5P20029 655 aaKnown RBP21.81■■□□□ 1.08
Cux1-206ENSMUST00000176172 Stk24Q99KH8 431 aa21.81■■□□□ 1.08
Cux1-206ENSMUST00000176172 Pds5bQ4VA53 1446 aaKnown RBP21.81■■□□□ 1.08
Cux1-206ENSMUST00000176172 Kif27Q7M6Z4 1394 aa21.81■■□□□ 1.08
Cux1-206ENSMUST00000176172 Neurod2Q62414 383 aa21.8■■□□□ 1.08
Cux1-206ENSMUST00000176172 1700123L14RikQ3V2K7 440 aa21.79■■□□□ 1.08
Cux1-206ENSMUST00000176172 Chmp4bQ9D8B3 224 aaKnown RBP21.79■■□□□ 1.08
Cux1-206ENSMUST00000176172 Apbb1Q9QXJ1 710 aa21.79■■□□□ 1.08
Cux1-206ENSMUST00000176172 Cep162Q6ZQ06 1403 aa21.79■■□□□ 1.08
Cux1-206ENSMUST00000176172 Stag3O70576 1240 aa21.77■■□□□ 1.08
Cux1-206ENSMUST00000176172 Irx6Q9ER75 438 aa21.77■■□□□ 1.08
Cux1-206ENSMUST00000176172 Vsig10D3YX43 558 aa21.77■■□□□ 1.07
Cux1-206ENSMUST00000176172 Fmn1Q05860 1466 aa21.76■■□□□ 1.07
Cux1-206ENSMUST00000176172 Trim44Q9QXA7 346 aa21.76■■□□□ 1.07
Cux1-206ENSMUST00000176172 Iqcf3Q9D498 203 aa21.75■■□□□ 1.07
Cux1-206ENSMUST00000176172 Ccdc88bQ4QRL3 1481 aa21.75■■□□□ 1.07
Cux1-206ENSMUST00000176172 Map4P27546 1125 aaKnown RBP21.75■■□□□ 1.07
Cux1-206ENSMUST00000176172 Pkd2O35245 966 aa21.74■■□□□ 1.07
Cux1-206ENSMUST00000176172 NudcO35685 332 aaKnown RBP21.74■■□□□ 1.07
Cux1-206ENSMUST00000176172 Aebp1Q640N1 1128 aa21.73■■□□□ 1.07
Cux1-206ENSMUST00000176172 Htatsf1Q8BGC0 757 aa21.73■■□□□ 1.07
Cux1-206ENSMUST00000176172 Ppm1gQ61074 542 aa21.72■■□□□ 1.07
Cux1-206ENSMUST00000176172 Fam71e1A1L3C1 212 aa21.7■■□□□ 1.06
Cux1-206ENSMUST00000176172 Wwc2Q6NXJ0 1187 aa21.69■■□□□ 1.06
Cux1-206ENSMUST00000176172 CatipB9EKE5 520 aa21.67■■□□□ 1.06
Cux1-206ENSMUST00000176172 Gm6268A2A3U9 297 aa21.67■■□□□ 1.06
Cux1-206ENSMUST00000176172 Map7O88735 730 aa21.65■■□□□ 1.06
Cux1-206ENSMUST00000176172 Fyco1Q8VDC1 1437 aa21.64■■□□□ 1.05
Cux1-206ENSMUST00000176172 Rundc1Q0VDN7 615 aa21.63■■□□□ 1.05
Cux1-206ENSMUST00000176172 Mbd3Q9Z2D8 285 aaKnown RBP21.63■■□□□ 1.05
Cux1-206ENSMUST00000176172 NgefQ8CHT1 710 aa21.61■■□□□ 1.05
Cux1-206ENSMUST00000176172 Arid4bA2CG63 1314 aaKnown RBP21.6■■□□□ 1.05
Cux1-206ENSMUST00000176172 Rwdd1Q9CQK7 243 aa21.6■■□□□ 1.05
Cux1-206ENSMUST00000176172 Ccdc27Q3V036 639 aa21.6■■□□□ 1.05
Cux1-206ENSMUST00000176172 Plcb2A3KGF7 1181 aa21.59■■□□□ 1.05
Cux1-206ENSMUST00000176172 Fhad1A6PWD2 1420 aa21.59■■□□□ 1.05
Cux1-206ENSMUST00000176172 Cnga1P29974 684 aa21.58■■□□□ 1.05
Cux1-206ENSMUST00000176172 Cabp1Q9JLK7 227 aa21.58■■□□□ 1.04
Cux1-206ENSMUST00000176172 CntlnA2AM05 1397 aa21.57■■□□□ 1.04
Cux1-206ENSMUST00000176172 Trak1Q6PD31 939 aa21.57■■□□□ 1.04
Cux1-206ENSMUST00000176172 PtmaP26350 111 aa21.56■■□□□ 1.04
Cux1-206ENSMUST00000176172 1700019A02RikA0A087WPV9 146 aa21.55■■□□□ 1.04
Cux1-206ENSMUST00000176172 Mphosph9A6H5Y1 991 aa21.54■■□□□ 1.04
Cux1-206ENSMUST00000176172 Gtf2e1Q9D0D5 440 aa21.54■■□□□ 1.04
Cux1-206ENSMUST00000176172 MyclP10166 368 aa21.53■■□□□ 1.04
Cux1-206ENSMUST00000176172 Dbr1Q923B1 550 aa21.53■■□□□ 1.04
Cux1-206ENSMUST00000176172 Ifit1bl1D3Z6F0 470 aa21.52■■□□□ 1.04
Cux1-206ENSMUST00000176172 Lemd3Q9WU40 921 aa21.52■■□□□ 1.04
Cux1-206ENSMUST00000176172 Zscan21Q07231 555 aa21.51■■□□□ 1.03
Cux1-206ENSMUST00000176172 Ythdc1E9Q5K9 736 aaKnown RBP21.5■■□□□ 1.03
Cux1-206ENSMUST00000176172 Arid3cA6PWV5 409 aa21.5■■□□□ 1.03
Cux1-206ENSMUST00000176172 Znf326O88291 580 aa21.5■■□□□ 1.03
Cux1-206ENSMUST00000176172 Rpap1Q80TE0 1409 aa21.5■■□□□ 1.03
Cux1-206ENSMUST00000176172 Tmf1B9EKI3 1091 aa21.49■■□□□ 1.03
Cux1-206ENSMUST00000176172 KnstrnQ9D9Z1 312 aaKnown RBP21.49■■□□□ 1.03
Cux1-206ENSMUST00000176172 AknaQ80VW7 1404 aa21.49■■□□□ 1.03
Cux1-206ENSMUST00000176172 Tcerg1Q8CGF7 1100 aaKnown RBP21.48■■□□□ 1.03
Cux1-206ENSMUST00000176172 Sin3aQ60520 1274 aaKnown RBP21.48■■□□□ 1.03
Cux1-206ENSMUST00000176172 Lmod3E9QA62 571 aa21.47■■□□□ 1.03
Cux1-206ENSMUST00000176172 Exoc6Q8R313 802 aa21.47■■□□□ 1.03
Cux1-206ENSMUST00000176172 Arhgap35Q91YM2 1499 aa21.47■■□□□ 1.03
Cux1-206ENSMUST00000176172 B4galnt3Q6L8S8 986 aa21.47■■□□□ 1.03
Retrieved 100 of 22,080 RNA–protein pairs in 122.5 ms