RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 BlmO88700 1416 aa14.22□□□□□ -0.13
Nup50-201ENSMUST00000165443 Pds5bQ4VA53 1446 aaKnown RBP14.21□□□□□ -0.13
Nup50-201ENSMUST00000165443 CftrP26361 1476 aa14.19□□□□□ -0.14
Nup50-201ENSMUST00000165443 Ifnlr1Q8CGK5 535 aa14.17□□□□□ -0.14
Nup50-201ENSMUST00000165443 Smarca4Q3TKT4 1613 aaKnown RBP14.16□□□□□ -0.14
Nup50-201ENSMUST00000165443 Prdm10Q3UTQ7 1184 aa14.16□□□□□ -0.14
Nup50-201ENSMUST00000165443 Fkbp15Q6P9Q6 1216 aaKnown RBP14.16□□□□□ -0.14
Nup50-201ENSMUST00000165443 Setd5Q5XJV7 1441 aa14.15□□□□□ -0.14
Nup50-201ENSMUST00000165443 Ubl4bQ9CQ84 188 aa14.15□□□□□ -0.14
Nup50-201ENSMUST00000165443 Synj1Q8CHC4 1574 aa14.15□□□□□ -0.14
Nup50-201ENSMUST00000165443 Chic2Q9D9G3 165 aa14.15□□□□□ -0.15
Nup50-201ENSMUST00000165443 Gm13695A2AK44 830 aa14.12□□□□□ -0.15
Nup50-201ENSMUST00000165443 Atad2bE9Q166 1460 aaKnown RBP14.12□□□□□ -0.15
Nup50-201ENSMUST00000165443 ArxO35085 564 aa14.1□□□□□ -0.15
Nup50-201ENSMUST00000165443 Rad21Q61550 635 aaKnown RBP14.08□□□□□ -0.15
Nup50-201ENSMUST00000165443 Hsp90aa1P07901 733 aaKnown RBP14.07□□□□□ -0.16
Nup50-201ENSMUST00000165443 Cttnbp2B9EJA2 1648 aa14.07□□□□□ -0.16
Nup50-201ENSMUST00000165443 Ercc6F8VPZ5 1481 aa14.04□□□□□ -0.16
Nup50-201ENSMUST00000165443 Rsf1E9PWW9 1441 aaKnown RBP14.03□□□□□ -0.16
Nup50-201ENSMUST00000165443 Aebp2Q9Z248 504 aaKnown RBP14.02□□□□□ -0.17
Nup50-201ENSMUST00000165443 1700123L14RikQ3V2K7 440 aa14.01□□□□□ -0.17
Nup50-201ENSMUST00000165443 Eea1Q8BL66 1411 aa14.01□□□□□ -0.17
Nup50-201ENSMUST00000165443 Iqgap2Q3UQ44 1575 aa13.99□□□□□ -0.17
Nup50-201ENSMUST00000165443 Cwc22Q8C5N3 908 aaKnown RBP13.98□□□□□ -0.17
Nup50-201ENSMUST00000165443 Ofd1Q80Z25 1017 aa13.98□□□□□ -0.17
Nup50-201ENSMUST00000165443 CanxP35564 591 aaKnown RBP13.96□□□□□ -0.17
Nup50-201ENSMUST00000165443 Rgl3Q3UYI5 709 aa13.95□□□□□ -0.18
Nup50-201ENSMUST00000165443 Ccdc88bQ4QRL3 1481 aa13.95□□□□□ -0.18
Nup50-201ENSMUST00000165443 Hsp90ab1P11499 724 aaKnown RBP13.91□□□□□ -0.18
Nup50-201ENSMUST00000165443 Fgd1P52734 960 aa13.91□□□□□ -0.18
Nup50-201ENSMUST00000165443 Trim30dE9PWL0 497 aa13.91□□□□□ -0.18
Nup50-201ENSMUST00000165443 Trim44Q9QXA7 346 aa13.9□□□□□ -0.18
Nup50-201ENSMUST00000165443 Fam71e1A1L3C1 212 aa13.9□□□□□ -0.18
Nup50-201ENSMUST00000165443 Fmn1Q05860 1466 aa13.9□□□□□ -0.18
Nup50-201ENSMUST00000165443 Htatsf1Q8BGC0 757 aa13.89□□□□□ -0.19
Nup50-201ENSMUST00000165443 Kif15Q6P9L6 1387 aa13.89□□□□□ -0.19
Nup50-201ENSMUST00000165443 Mia2Q91ZV0 1396 aa13.89□□□□□ -0.19
Nup50-201ENSMUST00000165443 Rangap1P46061 589 aaKnown RBP13.89□□□□□ -0.19
Nup50-201ENSMUST00000165443 Ccdc27Q3V036 639 aa13.89□□□□□ -0.19
Nup50-201ENSMUST00000165443 DekQ7TNV0 380 aaKnown RBP13.88□□□□□ -0.19
Nup50-201ENSMUST00000165443 Ppm1gQ61074 542 aa13.86□□□□□ -0.19
Nup50-201ENSMUST00000165443 Card11Q8CIS0 1159 aa13.86□□□□□ -0.19
Nup50-201ENSMUST00000165443 Bcl11aQ9QYE3 773 aa13.86□□□□□ -0.19
Nup50-201ENSMUST00000165443 Ccdc18Q640L5 1455 aa13.84□□□□□ -0.19
Nup50-201ENSMUST00000165443 CatipB9EKE5 520 aa13.83□□□□□ -0.2
Nup50-201ENSMUST00000165443 IqubQ8CDK3 788 aa13.82□□□□□ -0.2
Nup50-201ENSMUST00000165443 Chmp4bQ9D8B3 224 aaKnown RBP13.81□□□□□ -0.2
Nup50-201ENSMUST00000165443 Mroh3A0A1D5RM54 893 aa13.81□□□□□ -0.2
Nup50-201ENSMUST00000165443 P3h3Q8CG70 732 aa13.8□□□□□ -0.2
Nup50-201ENSMUST00000165443 Grwd1Q810D6 446 aaKnown RBP13.79□□□□□ -0.2
Nup50-201ENSMUST00000165443 Mbd3Q9Z2D8 285 aaKnown RBP13.78□□□□□ -0.2
Nup50-201ENSMUST00000165443 Trim26Q99PN3 545 aa13.78□□□□□ -0.2
Nup50-201ENSMUST00000165443 Srpk2O54781 681 aaKnown RBP13.78□□□□□ -0.2
Nup50-201ENSMUST00000165443 Mtus2Q3UHD3 1353 aa13.77□□□□□ -0.21
Nup50-201ENSMUST00000165443 Zfp777B9EKF4 885 aa13.76□□□□□ -0.21
Nup50-201ENSMUST00000165443 Phldb1Q6PDH0 1371 aaKnown RBP13.76□□□□□ -0.21
Nup50-201ENSMUST00000165443 Kdm2aP59997 1161 aa13.75□□□□□ -0.21
Nup50-201ENSMUST00000165443 Top2bQ64511 1612 aa13.75□□□□□ -0.21
Nup50-201ENSMUST00000165443 Gm20521D3Z5F7 333 aa13.74□□□□□ -0.21
Nup50-201ENSMUST00000165443 Map7O88735 730 aa13.73□□□□□ -0.21
Nup50-201ENSMUST00000165443 Frmpd1A2AKB4 1549 aa13.73□□□□□ -0.21
Nup50-201ENSMUST00000165443 Vsig10D3YX43 558 aa13.73□□□□□ -0.21
Nup50-201ENSMUST00000165443 Mapk8ip3Q9ESN9 1337 aa13.73□□□□□ -0.21
Nup50-201ENSMUST00000165443 PtmaP26350 111 aa13.71□□□□□ -0.21
Nup50-201ENSMUST00000165443 NudcO35685 332 aaKnown RBP13.71□□□□□ -0.22
Nup50-201ENSMUST00000165443 Plcb2A3KGF7 1181 aa13.71□□□□□ -0.22
Nup50-201ENSMUST00000165443 Ythdc1E9Q5K9 736 aaKnown RBP13.71□□□□□ -0.22
Nup50-201ENSMUST00000165443 Safb2Q80YR5 991 aaKnown RBP13.7□□□□□ -0.22
Nup50-201ENSMUST00000165443 Tcerg1Q8CGF7 1100 aaKnown RBP13.7□□□□□ -0.22
Nup50-201ENSMUST00000165443 Exosc9Q9JHI7 438 aaKnown RBP13.7□□□□□ -0.22
Nup50-201ENSMUST00000165443 Wdr62Q3U3T8 1523 aa13.69□□□□□ -0.22
Nup50-201ENSMUST00000165443 Plppr3Q7TPB0 716 aa13.69□□□□□ -0.22
Nup50-201ENSMUST00000165443 Arhgap27A2AB59 869 aa13.68□□□□□ -0.22
Nup50-201ENSMUST00000165443 Cc2d2aQ8CFW7 1633 aa13.68□□□□□ -0.22
Nup50-201ENSMUST00000165443 Lmod3E9QA62 571 aa13.68□□□□□ -0.22
Nup50-201ENSMUST00000165443 Rrp7aQ9D1C9 280 aaKnown RBP13.68□□□□□ -0.22
Nup50-201ENSMUST00000165443 Hspa5P20029 655 aaKnown RBP13.67□□□□□ -0.22
Nup50-201ENSMUST00000165443 Neurod2Q62414 383 aa13.67□□□□□ -0.22
Nup50-201ENSMUST00000165443 Rwdd1Q9CQK7 243 aa13.67□□□□□ -0.22
Nup50-201ENSMUST00000165443 Iqcf3Q9D498 203 aa13.67□□□□□ -0.22
Nup50-201ENSMUST00000165443 Apbb1Q9QXJ1 710 aa13.67□□□□□ -0.22
Nup50-201ENSMUST00000165443 Cep162Q6ZQ06 1403 aa13.65□□□□□ -0.22
Nup50-201ENSMUST00000165443 Wwc2Q6NXJ0 1187 aa13.64□□□□□ -0.23
Nup50-201ENSMUST00000165443 Irx3P81067 507 aa13.62□□□□□ -0.23
Nup50-201ENSMUST00000165443 KnstrnQ9D9Z1 312 aaKnown RBP13.62□□□□□ -0.23
Nup50-201ENSMUST00000165443 Pkd2O35245 966 aa13.61□□□□□ -0.23
Nup50-201ENSMUST00000165443 SafbD3YXK2 937 aaKnown RBP13.61□□□□□ -0.23
Nup50-201ENSMUST00000165443 Arid4bA2CG63 1314 aaKnown RBP13.61□□□□□ -0.23
Nup50-201ENSMUST00000165443 Cux2P70298 1426 aa13.6□□□□□ -0.23
Nup50-201ENSMUST00000165443 Top2aQ01320 1528 aaKnown RBP13.6□□□□□ -0.23
Nup50-201ENSMUST00000165443 Chmp5Q9D7S9 219 aa13.58□□□□□ -0.23
Nup50-201ENSMUST00000165443 Casc1Q6TDU8 730 aa13.58□□□□□ -0.24
Nup50-201ENSMUST00000165443 Adam1bQ8R534 806 aa13.58□□□□□ -0.24
Nup50-201ENSMUST00000165443 Kif27Q7M6Z4 1394 aa13.58□□□□□ -0.24
Nup50-201ENSMUST00000165443 Stag3O70576 1240 aa13.58□□□□□ -0.24
Nup50-201ENSMUST00000165443 Zscan21Q07231 555 aa13.58□□□□□ -0.24
Nup50-201ENSMUST00000165443 Dbr1Q923B1 550 aa13.58□□□□□ -0.24
Nup50-201ENSMUST00000165443 PtmsQ9D0J8 101 aaKnown RBP13.58□□□□□ -0.24
Nup50-201ENSMUST00000165443 Fyco1Q8VDC1 1437 aa13.57□□□□□ -0.24
Nup50-201ENSMUST00000165443 Gm6268A2A3U9 297 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms