RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Mrc2Q64449 1479 aa14.3□□□□□ -0.12
Ctc1-202ENSMUST00000116359 Ppp4r2Q0VGB7 417 aa14.3□□□□□ -0.12
Ctc1-202ENSMUST00000116359 Kif15Q6P9L6 1387 aa14.29□□□□□ -0.12
Ctc1-202ENSMUST00000116359 Pak3Q61036 559 aa14.27□□□□□ -0.12
Ctc1-202ENSMUST00000116359 Rpap1Q80TE0 1409 aa14.24□□□□□ -0.13
Ctc1-202ENSMUST00000116359 Wdr43Q6ZQL4 677 aaKnown RBP14.24□□□□□ -0.13
Ctc1-202ENSMUST00000116359 CftrP26361 1476 aa14.23□□□□□ -0.13
Ctc1-202ENSMUST00000116359 Ccdc9Q8VC31 543 aaKnown RBP14.21□□□□□ -0.13
Ctc1-202ENSMUST00000116359 Cux2P70298 1426 aa14.19□□□□□ -0.14
Ctc1-202ENSMUST00000116359 Eid3Q3V124 375 aa14.19□□□□□ -0.14
Ctc1-202ENSMUST00000116359 Ipo4Q8VI75 1082 aa14.16□□□□□ -0.14
Ctc1-202ENSMUST00000116359 Liat1Q810M6 228 aa14.15□□□□□ -0.14
Ctc1-202ENSMUST00000116359 Washc2Q6PGL7 1334 aa14.15□□□□□ -0.14
Ctc1-202ENSMUST00000116359 Synj1Q8CHC4 1574 aa14.15□□□□□ -0.14
Ctc1-202ENSMUST00000116359 Hsp90aa1P07901 733 aaKnown RBP14.15□□□□□ -0.15
Ctc1-202ENSMUST00000116359 Egfem1Q8C088 590 aa14.15□□□□□ -0.15
Ctc1-202ENSMUST00000116359 Dnajc5P60904 198 aa14.11□□□□□ -0.15
Ctc1-202ENSMUST00000116359 Ncapd3Q6ZQK0 1506 aa14.1□□□□□ -0.15
Ctc1-202ENSMUST00000116359 Slc24a1Q91WD8 1130 aa14.09□□□□□ -0.15
Ctc1-202ENSMUST00000116359 Golga3P55937 1487 aa14.07□□□□□ -0.16
Ctc1-202ENSMUST00000116359 Plekhg3Q4VAC9 1341 aa14.07□□□□□ -0.16
Ctc1-202ENSMUST00000116359 Cttnbp2B9EJA2 1648 aa14.06□□□□□ -0.16
Ctc1-202ENSMUST00000116359 Ccer2J3QPU5 274 aa14.05□□□□□ -0.16
Ctc1-202ENSMUST00000116359 Eif5bQ05D44 1216 aaKnown RBP14.05□□□□□ -0.16
Ctc1-202ENSMUST00000116359 Myt1lP97500 1187 aa14.05□□□□□ -0.16
Ctc1-202ENSMUST00000116359 4933416C03RikQ3V063 378 aa14.03□□□□□ -0.16
Ctc1-202ENSMUST00000116359 Baz1bQ9Z277 1479 aa14.03□□□□□ -0.16
Ctc1-202ENSMUST00000116359 Ipo9Q91YE6 1041 aa14.02□□□□□ -0.16
Ctc1-202ENSMUST00000116359 Kcnn1Q9EQR3 537 aa14.01□□□□□ -0.17
Ctc1-202ENSMUST00000116359 NclP09405 707 aaKnown RBP13.97□□□□□ -0.17
Ctc1-202ENSMUST00000116359 Slc4a3P16283 1227 aa13.97□□□□□ -0.17
Ctc1-202ENSMUST00000116359 Rapgef2Q8CHG7 1496 aa13.96□□□□□ -0.17
Ctc1-202ENSMUST00000116359 DaxxO35613 739 aa13.95□□□□□ -0.18
Ctc1-202ENSMUST00000116359 Pabpn1Q8CCS6 302 aaKnown RBP13.94□□□□□ -0.18
Ctc1-202ENSMUST00000116359 Iqcf3Q9D498 203 aa13.93□□□□□ -0.18
Ctc1-202ENSMUST00000116359 P3h3Q8CG70 732 aa13.92□□□□□ -0.18
Ctc1-202ENSMUST00000116359 Zfp777B9EKF4 885 aa13.91□□□□□ -0.18
Ctc1-202ENSMUST00000116359 Kdm5bQ80Y84 1544 aa13.9□□□□□ -0.18
Ctc1-202ENSMUST00000116359 Ccdc18Q640L5 1455 aa13.9□□□□□ -0.18
Ctc1-202ENSMUST00000116359 Clip1Q922J3 1391 aa13.89□□□□□ -0.19
Ctc1-202ENSMUST00000116359 Rtn4Q99P72 1162 aaKnown RBP13.89□□□□□ -0.19
Ctc1-202ENSMUST00000116359 Dhx29Q6PGC1 1365 aaKnown RBP13.88□□□□□ -0.19
Ctc1-202ENSMUST00000116359 Cep162Q6ZQ06 1403 aa13.87□□□□□ -0.19
Ctc1-202ENSMUST00000116359 Sin3aQ60520 1274 aaKnown RBP13.87□□□□□ -0.19
Ctc1-202ENSMUST00000116359 Smg6P61406 1418 aaKnown RBP13.86□□□□□ -0.19
Ctc1-202ENSMUST00000116359 AampJ3QN89 436 aa13.86□□□□□ -0.19
Ctc1-202ENSMUST00000116359 Urb2E9Q7L1 1524 aaKnown RBP13.86□□□□□ -0.19
Ctc1-202ENSMUST00000116359 Unc13aQ4KUS2 1712 aa13.85□□□□□ -0.19
Ctc1-202ENSMUST00000116359 Taok2Q6ZQ29 1240 aa13.83□□□□□ -0.2
Ctc1-202ENSMUST00000116359 Arhgap27A2AB59 869 aa13.82□□□□□ -0.2
Ctc1-202ENSMUST00000116359 Gm13697A2AK42 830 aa13.81□□□□□ -0.2
Ctc1-202ENSMUST00000116359 ChgaP26339 463 aaKnown RBP13.81□□□□□ -0.2
Ctc1-202ENSMUST00000116359 Znf692Q3U381 531 aa13.81□□□□□ -0.2
Ctc1-202ENSMUST00000116359 Lrriq1Q0P5X1 1673 aa13.8□□□□□ -0.2
Ctc1-202ENSMUST00000116359 Pdcl3Q8BVF2 240 aa13.8□□□□□ -0.2
Ctc1-202ENSMUST00000116359 LrpprcQ6PB66 1392 aaKnown RBP13.8□□□□□ -0.2
Ctc1-202ENSMUST00000116359 Npm2Q80W85 207 aa13.8□□□□□ -0.2
Ctc1-202ENSMUST00000116359 NeflP08551 543 aa13.78□□□□□ -0.2
Ctc1-202ENSMUST00000116359 Plb1Q3TTY0 1478 aa13.78□□□□□ -0.2
Ctc1-202ENSMUST00000116359 Tcerg1Q8CGF7 1100 aaKnown RBP13.78□□□□□ -0.2
Ctc1-202ENSMUST00000116359 Kif21aQ9QXL2 1672 aa13.77□□□□□ -0.21
Ctc1-202ENSMUST00000116359 NgefQ8CHT1 710 aa13.76□□□□□ -0.21
Ctc1-202ENSMUST00000116359 Kcnh8P59111 1102 aa13.75□□□□□ -0.21
Ctc1-202ENSMUST00000116359 Zbtb4Q5F293 982 aa13.73□□□□□ -0.21
Ctc1-202ENSMUST00000116359 Top2bQ64511 1612 aa13.72□□□□□ -0.21
Ctc1-202ENSMUST00000116359 Mrs2Q5NCE8 434 aa13.72□□□□□ -0.21
Ctc1-202ENSMUST00000116359 UacaQ8CGB3 1411 aa13.71□□□□□ -0.21
Ctc1-202ENSMUST00000116359 Gtf2a1Q99PM3 378 aa13.71□□□□□ -0.21
Ctc1-202ENSMUST00000116359 DmtnQ9WV69 405 aa13.7□□□□□ -0.22
Ctc1-202ENSMUST00000116359 Hspa5P20029 655 aaKnown RBP13.68□□□□□ -0.22
Ctc1-202ENSMUST00000116359 Slc4a2P13808 1237 aaKnown RBP13.67□□□□□ -0.22
Ctc1-202ENSMUST00000116359 Lamc3Q9R0B6 1581 aa13.67□□□□□ -0.22
Ctc1-202ENSMUST00000116359 Dnttip2Q8R2M2 758 aaKnown RBP13.66□□□□□ -0.22
Ctc1-202ENSMUST00000116359 Plppr3Q7TPB0 716 aa13.63□□□□□ -0.23
Ctc1-202ENSMUST00000116359 Gtf3c5Q8R2T8 520 aa13.62□□□□□ -0.23
Ctc1-202ENSMUST00000116359 Wwc2Q6NXJ0 1187 aa13.61□□□□□ -0.23
Ctc1-202ENSMUST00000116359 Fkbp15Q6P9Q6 1216 aaKnown RBP13.61□□□□□ -0.23
Ctc1-202ENSMUST00000116359 Rrp9Q91WM3 475 aaKnown RBP13.61□□□□□ -0.23
Ctc1-202ENSMUST00000116359 Ncoa2Q61026 1462 aa13.61□□□□□ -0.23
Ctc1-202ENSMUST00000116359 AknaQ80VW7 1404 aa13.6□□□□□ -0.23
Ctc1-202ENSMUST00000116359 AU015836B2RUM3 263 aa13.6□□□□□ -0.23
Ctc1-202ENSMUST00000116359 Top2aQ01320 1528 aaKnown RBP13.6□□□□□ -0.23
Ctc1-202ENSMUST00000116359 Fam50aQ9WV03 339 aaKnown RBP13.59□□□□□ -0.23
Ctc1-202ENSMUST00000116359 TchhA0A0B4J1F9 1599 aa13.59□□□□□ -0.23
Ctc1-202ENSMUST00000116359 CanxP35564 591 aaKnown RBP13.59□□□□□ -0.23
Ctc1-202ENSMUST00000116359 Sart3Q9JLI8 962 aaKnown RBP13.58□□□□□ -0.23
Ctc1-202ENSMUST00000116359 Crocc2F6XLV1 1638 aa13.58□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Armcx1Q9CX83 456 aa13.57□□□□□ -0.24
Ctc1-202ENSMUST00000116359 PogzQ8BZH4 1409 aaKnown RBP13.57□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Arap1Q4LDD4 1452 aa13.56□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Zbtb7cQ8VCZ7 619 aa13.56□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Exoc6Q8R313 802 aa13.56□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Ift140E9PY46 1464 aa13.56□□□□□ -0.24
Ctc1-202ENSMUST00000116359 L3mbtl2P59178 703 aa13.56□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Nkx1-2P42580 305 aa13.55□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Duox2A2AQ99 1517 aa13.55□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Eif4g3Q80XI3 1579 aaKnown RBP13.55□□□□□ -0.24
Ctc1-202ENSMUST00000116359 BccipQ9CWI3 316 aa13.55□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Chrna2Q91X60 512 aa13.54□□□□□ -0.24
Ctc1-202ENSMUST00000116359 Fmn1Q05860 1466 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms