RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 DiexfQ8BTT6 772 aaKnown RBP20.93■□□□□ 0.94
Tpm1-209ENSMUST00000113690 Tiam1Q60610 1591 aa20.91■□□□□ 0.94
Tpm1-209ENSMUST00000113690 Hspa5P20029 655 aaKnown RBP20.9■□□□□ 0.94
Tpm1-209ENSMUST00000113690 Naip1Q9QWK5 1403 aa20.88■□□□□ 0.93
Tpm1-209ENSMUST00000113690 Atad2bE9Q166 1460 aaKnown RBP20.88■□□□□ 0.93
Tpm1-209ENSMUST00000113690 Slc24a1Q91WD8 1130 aa20.87■□□□□ 0.93
Tpm1-209ENSMUST00000113690 Shroom4Q1W617 1475 aa20.86■□□□□ 0.93
Tpm1-209ENSMUST00000113690 Kif15Q6P9L6 1387 aa20.85■□□□□ 0.93
Tpm1-209ENSMUST00000113690 TchhA0A0B4J1F9 1599 aa20.82■□□□□ 0.92
Tpm1-209ENSMUST00000113690 Slx4Q6P1D7 1565 aa20.8■□□□□ 0.92
Tpm1-209ENSMUST00000113690 Anp32aO35381 247 aa20.78■□□□□ 0.92
Tpm1-209ENSMUST00000113690 Stra8P70278 393 aa20.78■□□□□ 0.92
Tpm1-209ENSMUST00000113690 Sin3aQ60520 1274 aaKnown RBP20.77■□□□□ 0.92
Tpm1-209ENSMUST00000113690 Nolc1E9Q5C9 702 aaKnown RBP20.76■□□□□ 0.91
Tpm1-209ENSMUST00000113690 Map3k1P53349 1493 aa20.76■□□□□ 0.91
Tpm1-209ENSMUST00000113690 Ankrd26Q811D2 1581 aa20.76■□□□□ 0.91
Tpm1-209ENSMUST00000113690 Pcf11G3X9Z4 1553 aa20.75■□□□□ 0.91
Tpm1-209ENSMUST00000113690 Frmpd1A2AKB4 1549 aa20.75■□□□□ 0.91
Tpm1-209ENSMUST00000113690 Calr4Q3TQS0 420 aa20.74■□□□□ 0.91
Tpm1-209ENSMUST00000113690 Camsap1A2AHC3 1581 aa20.73■□□□□ 0.91
Tpm1-209ENSMUST00000113690 3425401B19RikD3Z1D3 1412 aa20.72■□□□□ 0.91
Tpm1-209ENSMUST00000113690 Lamc3Q9R0B6 1581 aa20.72■□□□□ 0.91
Tpm1-209ENSMUST00000113690 Mroh2bQ7M6Y6 1581 aa20.7■□□□□ 0.9
Tpm1-209ENSMUST00000113690 Ube2uB1AUC4 352 aa20.7■□□□□ 0.9
Tpm1-209ENSMUST00000113690 Gm13697A2AK42 830 aa20.69■□□□□ 0.9
Tpm1-209ENSMUST00000113690 Bcl11aQ9QYE3 773 aa20.68■□□□□ 0.9
Tpm1-209ENSMUST00000113690 Erich3F6QRE9 1637 aa20.67■□□□□ 0.9
Tpm1-209ENSMUST00000113690 UacaQ8CGB3 1411 aa20.66■□□□□ 0.9
Tpm1-209ENSMUST00000113690 Pds5bQ4VA53 1446 aaKnown RBP20.65■□□□□ 0.9
Tpm1-209ENSMUST00000113690 Dhx29Q6PGC1 1365 aaKnown RBP20.64■□□□□ 0.9
Tpm1-209ENSMUST00000113690 Grin2bQ01097 1482 aa20.64■□□□□ 0.89
Tpm1-209ENSMUST00000113690 Wdr62Q3U3T8 1523 aa20.63■□□□□ 0.89
Tpm1-209ENSMUST00000113690 Eif5bQ05D44 1216 aaKnown RBP20.61■□□□□ 0.89
Tpm1-209ENSMUST00000113690 Chic2Q9D9G3 165 aa20.59■□□□□ 0.89
Tpm1-209ENSMUST00000113690 Cux1P53564 1515 aa20.58■□□□□ 0.89
Tpm1-209ENSMUST00000113690 Ifnlr1Q8CGK5 535 aa20.56■□□□□ 0.88
Tpm1-209ENSMUST00000113690 Fhad1A6PWD2 1420 aa20.56■□□□□ 0.88
Tpm1-209ENSMUST00000113690 CntlnA2AM05 1397 aa20.56■□□□□ 0.88
Tpm1-209ENSMUST00000113690 Smg6P61406 1418 aaKnown RBP20.55■□□□□ 0.88
Tpm1-209ENSMUST00000113690 Ankrd36D3Z4K0 1415 aa20.54■□□□□ 0.88
Tpm1-209ENSMUST00000113690 Lmo7E9PYF4 1699 aaKnown RBP20.54■□□□□ 0.88
Tpm1-209ENSMUST00000113690 Ccer2J3QPU5 274 aa20.53■□□□□ 0.88
Tpm1-209ENSMUST00000113690 Mia2Q91ZV0 1396 aa20.53■□□□□ 0.88
Tpm1-209ENSMUST00000113690 Fyco1Q8VDC1 1437 aa20.52■□□□□ 0.88
Tpm1-209ENSMUST00000113690 Unc13aQ4KUS2 1712 aa20.51■□□□□ 0.87
Tpm1-209ENSMUST00000113690 Ppp4r2Q0VGB7 417 aa20.51■□□□□ 0.87
Tpm1-209ENSMUST00000113690 Supt16hQ920B9 1047 aa20.5■□□□□ 0.87
Tpm1-209ENSMUST00000113690 Vps8Q0P5W1 1427 aa20.49■□□□□ 0.87
Tpm1-209ENSMUST00000113690 P3h3Q8CG70 732 aa20.48■□□□□ 0.87
Tpm1-209ENSMUST00000113690 Naip2Q9QUK4 1447 aa20.47■□□□□ 0.87
Tpm1-209ENSMUST00000113690 Aebp1Q640N1 1128 aa20.47■□□□□ 0.87
Tpm1-209ENSMUST00000113690 Carmil1Q6EDY6 1374 aa20.45■□□□□ 0.86
Tpm1-209ENSMUST00000113690 Gm7298A0A0N4SVU1 1476 aa20.45■□□□□ 0.86
Tpm1-209ENSMUST00000113690 Naip5Q9R016 1403 aa20.43■□□□□ 0.86
Tpm1-209ENSMUST00000113690 Efcab5A0JP43 1406 aa20.42■□□□□ 0.86
Tpm1-209ENSMUST00000113690 Mrs2Q5NCE8 434 aa20.42■□□□□ 0.86
Tpm1-209ENSMUST00000113690 A2mQ6GQT1 1474 aa20.41■□□□□ 0.86
Tpm1-209ENSMUST00000113690 Npm1Q61937 292 aaKnown RBP20.4■□□□□ 0.86
Tpm1-209ENSMUST00000113690 Ercc6F8VPZ5 1481 aa20.4■□□□□ 0.86
Tpm1-209ENSMUST00000113690 Gm1043A0A140LJC2 1431 aa20.39■□□□□ 0.85
Tpm1-209ENSMUST00000113690 Wdr43Q6ZQL4 677 aaKnown RBP20.39■□□□□ 0.85
Tpm1-209ENSMUST00000113690 Urb2E9Q7L1 1524 aaKnown RBP20.39■□□□□ 0.85
Tpm1-209ENSMUST00000113690 Wwc2Q6NXJ0 1187 aa20.38■□□□□ 0.85
Tpm1-209ENSMUST00000113690 Ncoa2Q61026 1462 aa20.38■□□□□ 0.85
Tpm1-209ENSMUST00000113690 Crocc2F6XLV1 1638 aa20.37■□□□□ 0.85
Tpm1-209ENSMUST00000113690 Dennd4bQ3U1Y4 1499 aa20.35■□□□□ 0.85
Tpm1-209ENSMUST00000113690 Washc2Q6PGL7 1334 aa20.35■□□□□ 0.85
Tpm1-209ENSMUST00000113690 Cux2P70298 1426 aa20.34■□□□□ 0.85
Tpm1-209ENSMUST00000113690 PrkcshO08795 521 aa20.34■□□□□ 0.85
Tpm1-209ENSMUST00000113690 Slc4a2P13808 1237 aaKnown RBP20.32■□□□□ 0.84
Tpm1-209ENSMUST00000113690 Ccnb3Q810T2 1396 aa20.32■□□□□ 0.84
Tpm1-209ENSMUST00000113690 Pak3Q61036 559 aa20.31■□□□□ 0.84
Tpm1-209ENSMUST00000113690 Camsap2Q8C1B1 1461 aa20.3■□□□□ 0.84
Tpm1-209ENSMUST00000113690 Peg3Q3URU2 1571 aa20.3■□□□□ 0.84
Tpm1-209ENSMUST00000113690 Mphosph9A6H5Y1 991 aa20.29■□□□□ 0.84
Tpm1-209ENSMUST00000113690 Exoc6Q8R313 802 aa20.28■□□□□ 0.84
Tpm1-209ENSMUST00000113690 Rtl5Q5DTT4 599 aa20.28■□□□□ 0.84
Tpm1-209ENSMUST00000113690 Duox2A2AQ99 1517 aa20.26■□□□□ 0.83
Tpm1-209ENSMUST00000113690 Slc4a3P16283 1227 aa20.25■□□□□ 0.83
Tpm1-209ENSMUST00000113690 NrdcQ8BHG1 1161 aa20.25■□□□□ 0.83
Tpm1-209ENSMUST00000113690 Ubl4bQ9CQ84 188 aa20.25■□□□□ 0.83
Tpm1-209ENSMUST00000113690 Pelp1Q9DBD5 1123 aaKnown RBP20.25■□□□□ 0.83
Tpm1-209ENSMUST00000113690 LrpprcQ6PB66 1392 aaKnown RBP20.25■□□□□ 0.83
Tpm1-209ENSMUST00000113690 Zfp644E9QA22 1323 aa20.24■□□□□ 0.83
Tpm1-209ENSMUST00000113690 Rad54l2Q99NG0 1466 aa20.22■□□□□ 0.83
Tpm1-209ENSMUST00000113690 Cul7Q8VE73 1689 aa20.22■□□□□ 0.83
Tpm1-209ENSMUST00000113690 Liat1Q810M6 228 aa20.2■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Pprc1Q6NZN1 1644 aa20.2■□□□□ 0.82
Tpm1-209ENSMUST00000113690 PogzQ8BZH4 1409 aaKnown RBP20.19■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Cabp1Q9JLK7 227 aa20.17■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Ttbk1Q6PCN3 1308 aa20.17■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Pkd2O35245 966 aa20.17■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Usp47Q8BY87 1376 aa20.16■□□□□ 0.82
Tpm1-209ENSMUST00000113690 SynmQ70IV5 1561 aa20.16■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Thoc2B1AZI6 1594 aaKnown RBP20.16■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Samd9lQ69Z37 1561 aa20.15■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Ncoa1P70365 1447 aa20.15■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Gm13695A2AK44 830 aa20.15■□□□□ 0.82
Tpm1-209ENSMUST00000113690 Kcnh8P59111 1102 aa20.12■□□□□ 0.81
Tpm1-209ENSMUST00000113690 Egfem1Q8C088 590 aa20.1■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms