RNA–Protein interactions for RNA: ENSMUST00000112736.7

Vps4b-202, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,539 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-202ENSMUST00000112736 Grwd1Q810D6 446 aaKnown RBP17.54■□□□□ 0.4
Vps4b-202ENSMUST00000112736 Gm13697A2AK42 830 aa17.53■□□□□ 0.4
Vps4b-202ENSMUST00000112736 4933416C03RikQ3V063 378 aa17.53■□□□□ 0.4
Vps4b-202ENSMUST00000112736 Anp32aO35381 247 aa17.52■□□□□ 0.4
Vps4b-202ENSMUST00000112736 Calr4Q3TQS0 420 aa17.52■□□□□ 0.4
Vps4b-202ENSMUST00000112736 Rangap1P46061 589 aaKnown RBP17.51■□□□□ 0.39
Vps4b-202ENSMUST00000112736 Polr3glQ8R0C0 218 aa17.51■□□□□ 0.39
Vps4b-202ENSMUST00000112736 Ppp4r2Q0VGB7 417 aa17.5■□□□□ 0.39
Vps4b-202ENSMUST00000112736 Ccdc18Q640L5 1455 aa17.48■□□□□ 0.39
Vps4b-202ENSMUST00000112736 Smarca2Q6DIC0 1577 aa17.48■□□□□ 0.39
Vps4b-202ENSMUST00000112736 Nlrp6Q91WS2 869 aa17.47■□□□□ 0.39
Vps4b-202ENSMUST00000112736 Synj1Q8CHC4 1574 aa17.47■□□□□ 0.39
Vps4b-202ENSMUST00000112736 Sin3aQ60520 1274 aaKnown RBP17.46■□□□□ 0.39
Vps4b-202ENSMUST00000112736 SafbD3YXK2 937 aaKnown RBP17.46■□□□□ 0.39
Vps4b-202ENSMUST00000112736 Aplp2Q06335 707 aa17.46■□□□□ 0.39
Vps4b-202ENSMUST00000112736 Ercc6F8VPZ5 1481 aa17.44■□□□□ 0.38
Vps4b-202ENSMUST00000112736 Rapgef2Q8CHG7 1496 aa17.44■□□□□ 0.38
Vps4b-202ENSMUST00000112736 ArxO35085 564 aa17.44■□□□□ 0.38
Vps4b-202ENSMUST00000112736 Fmn1Q05860 1466 aa17.42■□□□□ 0.38
Vps4b-202ENSMUST00000112736 Aebp1Q640N1 1128 aa17.37■□□□□ 0.37
Vps4b-202ENSMUST00000112736 Crybg2B7ZCC2 1516 aa17.37■□□□□ 0.37
Vps4b-202ENSMUST00000112736 Kdm2aP59997 1161 aa17.36■□□□□ 0.37
Vps4b-202ENSMUST00000112736 Wwc2Q6NXJ0 1187 aa17.34■□□□□ 0.37
Vps4b-202ENSMUST00000112736 Pds5bQ4VA53 1446 aaKnown RBP17.33■□□□□ 0.36
Vps4b-202ENSMUST00000112736 Rrp7aQ9D1C9 280 aaKnown RBP17.3■□□□□ 0.36
Vps4b-202ENSMUST00000112736 Gm13695A2AK44 830 aa17.29■□□□□ 0.36
Vps4b-202ENSMUST00000112736 Cabp1Q9JLK7 227 aa17.28■□□□□ 0.36
Vps4b-202ENSMUST00000112736 Myt1Q8CFC2 1127 aa17.27■□□□□ 0.36
Vps4b-202ENSMUST00000112736 Fam71e1A1L3C1 212 aa17.27■□□□□ 0.35
Vps4b-202ENSMUST00000112736 Wdr43Q6ZQL4 677 aaKnown RBP17.26■□□□□ 0.35
Vps4b-202ENSMUST00000112736 Cux2P70298 1426 aa17.25■□□□□ 0.35
Vps4b-202ENSMUST00000112736 DaxxO35613 739 aa17.25■□□□□ 0.35
Vps4b-202ENSMUST00000112736 Card11Q8CIS0 1159 aa17.24■□□□□ 0.35
Vps4b-202ENSMUST00000112736 Pkd2O35245 966 aa17.22■□□□□ 0.35
Vps4b-202ENSMUST00000112736 Ofd1Q80Z25 1017 aa17.22■□□□□ 0.35
Vps4b-202ENSMUST00000112736 Baz1bQ9Z277 1479 aa17.22■□□□□ 0.35
Vps4b-202ENSMUST00000112736 Trim26Q99PN3 545 aa17.22■□□□□ 0.35
Vps4b-202ENSMUST00000112736 Kif27Q7M6Z4 1394 aa17.22■□□□□ 0.35
Vps4b-202ENSMUST00000112736 Clstn2Q9ER65 966 aa17.2■□□□□ 0.34
Vps4b-202ENSMUST00000112736 Apbb1Q9QXJ1 710 aa17.19■□□□□ 0.34
Vps4b-202ENSMUST00000112736 Mtus2Q3UHD3 1353 aa17.18■□□□□ 0.34
Vps4b-202ENSMUST00000112736 Mroh3A0A1D5RM54 893 aa17.18■□□□□ 0.34
Vps4b-202ENSMUST00000112736 Slc4a3P16283 1227 aa17.17■□□□□ 0.34
Vps4b-202ENSMUST00000112736 Trak1Q6PD31 939 aa17.16■□□□□ 0.34
Vps4b-202ENSMUST00000112736 Rpap1Q80TE0 1409 aa17.16■□□□□ 0.34
Vps4b-202ENSMUST00000112736 Ecm2Q5FW85 670 aa17.16■□□□□ 0.34
Vps4b-202ENSMUST00000112736 Mphosph9A6H5Y1 991 aa17.13■□□□□ 0.33
Vps4b-202ENSMUST00000112736 Stk24Q99KH8 431 aa17.12■□□□□ 0.33
Vps4b-202ENSMUST00000112736 Mia2Q91ZV0 1396 aa17.12■□□□□ 0.33
Vps4b-202ENSMUST00000112736 Atad2bE9Q166 1460 aaKnown RBP17.12■□□□□ 0.33
Vps4b-202ENSMUST00000112736 Arid3cA6PWV5 409 aa17.11■□□□□ 0.33
Vps4b-202ENSMUST00000112736 Neurod2Q62414 383 aa17.1■□□□□ 0.33
Vps4b-202ENSMUST00000112736 Map4P27546 1125 aaKnown RBP17.09■□□□□ 0.33
Vps4b-202ENSMUST00000112736 Rundc1Q0VDN7 615 aa17.09■□□□□ 0.33
Vps4b-202ENSMUST00000112736 Smarca4Q3TKT4 1613 aaKnown RBP17.09■□□□□ 0.33
Vps4b-202ENSMUST00000112736 Cnga1P29974 684 aa17.08■□□□□ 0.32
Vps4b-202ENSMUST00000112736 Rtl5Q5DTT4 599 aa17.08■□□□□ 0.32
Vps4b-202ENSMUST00000112736 Exoc6Q8R313 802 aa17.08■□□□□ 0.32
Vps4b-202ENSMUST00000112736 Gm20521D3Z5F7 333 aa17.05■□□□□ 0.32
Vps4b-202ENSMUST00000112736 CntlnA2AM05 1397 aa17.03■□□□□ 0.32
Vps4b-202ENSMUST00000112736 Fyco1Q8VDC1 1437 aa17.02■□□□□ 0.32
Vps4b-202ENSMUST00000112736 Hdac5Q9Z2V6 1113 aa17.01■□□□□ 0.31
Vps4b-202ENSMUST00000112736 LrpprcQ6PB66 1392 aaKnown RBP17.01■□□□□ 0.31
Vps4b-202ENSMUST00000112736 Phldb1Q6PDH0 1371 aaKnown RBP17.01■□□□□ 0.31
Vps4b-202ENSMUST00000112736 AknaQ80VW7 1404 aa17■□□□□ 0.31
Vps4b-202ENSMUST00000112736 Ccnb3Q810T2 1396 aa16.99■□□□□ 0.31
Vps4b-202ENSMUST00000112736 Srpk2O54781 681 aaKnown RBP16.99■□□□□ 0.31
Vps4b-202ENSMUST00000112736 Cwc22Q8C5N3 908 aaKnown RBP16.99■□□□□ 0.31
Vps4b-202ENSMUST00000112736 Carmil1Q6EDY6 1374 aa16.98■□□□□ 0.31
Vps4b-202ENSMUST00000112736 Dbr1Q923B1 550 aa16.98■□□□□ 0.31
Vps4b-202ENSMUST00000112736 Ifit1bl1D3Z6F0 470 aa16.98■□□□□ 0.31
Vps4b-202ENSMUST00000112736 Cttnbp2B9EJA2 1648 aa16.97■□□□□ 0.31
Vps4b-202ENSMUST00000112736 Dhx29Q6PGC1 1365 aaKnown RBP16.95■□□□□ 0.3
Vps4b-202ENSMUST00000112736 Arhgap35Q91YM2 1499 aa16.95■□□□□ 0.3
Vps4b-202ENSMUST00000112736 Upf2A2AT37 1269 aaKnown RBP16.94■□□□□ 0.3
Vps4b-202ENSMUST00000112736 Iqgap2Q3UQ44 1575 aa16.93■□□□□ 0.3
Vps4b-202ENSMUST00000112736 B4galnt3Q6L8S8 986 aa16.91■□□□□ 0.3
Vps4b-202ENSMUST00000112736 Irx6Q9ER75 438 aa16.91■□□□□ 0.3
Vps4b-202ENSMUST00000112736 Trim30dE9PWL0 497 aa16.9■□□□□ 0.3
Vps4b-202ENSMUST00000112736 Zfp644E9QA22 1323 aa16.9■□□□□ 0.3
Vps4b-202ENSMUST00000112736 Cc2d2aQ8CFW7 1633 aa16.89■□□□□ 0.29
Vps4b-202ENSMUST00000112736 Safb2Q80YR5 991 aaKnown RBP16.89■□□□□ 0.29
Vps4b-202ENSMUST00000112736 Armcx1Q9CX83 456 aa16.89■□□□□ 0.29
Vps4b-202ENSMUST00000112736 Exosc9Q9JHI7 438 aaKnown RBP16.88■□□□□ 0.29
Vps4b-202ENSMUST00000112736 Arid4bA2CG63 1314 aaKnown RBP16.87■□□□□ 0.29
Vps4b-202ENSMUST00000112736 PtprkP35822 1457 aa16.87■□□□□ 0.29
Vps4b-202ENSMUST00000112736 DiexfQ8BTT6 772 aaKnown RBP16.86■□□□□ 0.29
Vps4b-202ENSMUST00000112736 Stag3O70576 1240 aa16.86■□□□□ 0.29
Vps4b-202ENSMUST00000112736 CanxP35564 591 aaKnown RBP16.86■□□□□ 0.29
Vps4b-202ENSMUST00000112736 NgefQ8CHT1 710 aa16.84■□□□□ 0.29
Vps4b-202ENSMUST00000112736 Stk26Q99JT2 416 aa16.84■□□□□ 0.29
Vps4b-202ENSMUST00000112736 WrnO09053 1401 aa16.84■□□□□ 0.29
Vps4b-202ENSMUST00000112736 Sart1Q9Z315 806 aaKnown RBP16.83■□□□□ 0.29
Vps4b-202ENSMUST00000112736 Rad54l2Q99NG0 1466 aa16.82■□□□□ 0.28
Vps4b-202ENSMUST00000112736 IqubQ8CDK3 788 aa16.82■□□□□ 0.28
Vps4b-202ENSMUST00000112736 Senp3Q9EP97 568 aaKnown RBP16.82■□□□□ 0.28
Vps4b-202ENSMUST00000112736 Vsig10D3YX43 558 aa16.81■□□□□ 0.28
Vps4b-202ENSMUST00000112736 Usp47Q8BY87 1376 aa16.8■□□□□ 0.28
Vps4b-202ENSMUST00000112736 Kif3bQ61771 747 aa16.79■□□□□ 0.28
Vps4b-202ENSMUST00000112736 Plin1Q8CGN5 517 aa16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms