RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Rapgef2Q8CHG7 1496 aa15.58■□□□□ 0.08
Col20a1-201ENSMUST00000108856 Arhgap27A2AB59 869 aa15.58■□□□□ 0.08
Col20a1-201ENSMUST00000108856 Csrnp3P59055 597 aa15.57■□□□□ 0.08
Col20a1-201ENSMUST00000108856 Eea1Q8BL66 1411 aa15.54■□□□□ 0.08
Col20a1-201ENSMUST00000108856 NeflP08551 543 aa15.54■□□□□ 0.08
Col20a1-201ENSMUST00000108856 Top2bQ64511 1612 aa15.54■□□□□ 0.08
Col20a1-201ENSMUST00000108856 Anks4bQ8K3X6 423 aa15.53■□□□□ 0.08
Col20a1-201ENSMUST00000108856 Ppp1r18Q8BQ30 594 aa15.5■□□□□ 0.07
Col20a1-201ENSMUST00000108856 BlmO88700 1416 aa15.49■□□□□ 0.07
Col20a1-201ENSMUST00000108856 Phldb1Q6PDH0 1371 aaKnown RBP15.48■□□□□ 0.07
Col20a1-201ENSMUST00000108856 Top2aQ01320 1528 aaKnown RBP15.47■□□□□ 0.07
Col20a1-201ENSMUST00000108856 4933416C03RikQ3V063 378 aa15.47■□□□□ 0.07
Col20a1-201ENSMUST00000108856 DiexfQ8BTT6 772 aaKnown RBP15.43■□□□□ 0.06
Col20a1-201ENSMUST00000108856 Zbtb4Q5F293 982 aa15.43■□□□□ 0.06
Col20a1-201ENSMUST00000108856 MyclP10166 368 aa15.42■□□□□ 0.06
Col20a1-201ENSMUST00000108856 Aebp2Q9Z248 504 aaKnown RBP15.4■□□□□ 0.06
Col20a1-201ENSMUST00000108856 Cux2P70298 1426 aa15.37■□□□□ 0.05
Col20a1-201ENSMUST00000108856 Arid3cA6PWV5 409 aa15.37■□□□□ 0.05
Col20a1-201ENSMUST00000108856 Anp32aO35381 247 aa15.36■□□□□ 0.05
Col20a1-201ENSMUST00000108856 AknaQ80VW7 1404 aa15.34■□□□□ 0.05
Col20a1-201ENSMUST00000108856 Chic2Q9D9G3 165 aa15.31■□□□□ 0.04
Col20a1-201ENSMUST00000108856 Pabpn1Q8CCS6 302 aaKnown RBP15.3■□□□□ 0.04
Col20a1-201ENSMUST00000108856 Hdac5Q9Z2V6 1113 aa15.3■□□□□ 0.04
Col20a1-201ENSMUST00000108856 Frmpd1A2AKB4 1549 aa15.29■□□□□ 0.04
Col20a1-201ENSMUST00000108856 Ccer2J3QPU5 274 aa15.29■□□□□ 0.04
Col20a1-201ENSMUST00000108856 Aplp2Q06335 707 aa15.29■□□□□ 0.04
Col20a1-201ENSMUST00000108856 Baz1bQ9Z277 1479 aa15.28■□□□□ 0.04
Col20a1-201ENSMUST00000108856 P3h3Q8CG70 732 aa15.28■□□□□ 0.04
Col20a1-201ENSMUST00000108856 Rtl5Q5DTT4 599 aa15.27■□□□□ 0.03
Col20a1-201ENSMUST00000108856 MlecQ6ZQI3 291 aaKnown RBP15.25■□□□□ 0.03
Col20a1-201ENSMUST00000108856 Prdm10Q3UTQ7 1184 aa15.22■□□□□ 0.03
Col20a1-201ENSMUST00000108856 Clstn2Q9ER65 966 aa15.22■□□□□ 0.03
Col20a1-201ENSMUST00000108856 Arhgap35Q91YM2 1499 aa15.22■□□□□ 0.03
Col20a1-201ENSMUST00000108856 Shroom4Q1W617 1475 aa15.21■□□□□ 0.03
Col20a1-201ENSMUST00000108856 Wdr62Q3U3T8 1523 aa15.2■□□□□ 0.02
Col20a1-201ENSMUST00000108856 1700123L14RikQ3V2K7 440 aa15.19■□□□□ 0.02
Col20a1-201ENSMUST00000108856 Calr4Q3TQS0 420 aa15.18■□□□□ 0.02
Col20a1-201ENSMUST00000108856 PtprkP35822 1457 aa15.17■□□□□ 0.02
Col20a1-201ENSMUST00000108856 LrpprcQ6PB66 1392 aaKnown RBP15.17■□□□□ 0.02
Col20a1-201ENSMUST00000108856 Carmil1Q6EDY6 1374 aa15.16■□□□□ 0.02
Col20a1-201ENSMUST00000108856 Mrs2Q5NCE8 434 aa15.16■□□□□ 0.02
Col20a1-201ENSMUST00000108856 NrkQ9R0G8 1455 aa15.15■□□□□ 0.02
Col20a1-201ENSMUST00000108856 Aebp1Q640N1 1128 aa15.13■□□□□ 0.01
Col20a1-201ENSMUST00000108856 CntlnA2AM05 1397 aa15.13■□□□□ 0.01
Col20a1-201ENSMUST00000108856 Ppp4r2Q0VGB7 417 aa15.13■□□□□ 0.01
Col20a1-201ENSMUST00000108856 DaxxO35613 739 aa15.12■□□□□ 0.01
Col20a1-201ENSMUST00000108856 Lamc3Q9R0B6 1581 aa15.1■□□□□ 0.01
Col20a1-201ENSMUST00000108856 Grin2bQ01097 1482 aa15.09■□□□□ 0.01
Col20a1-201ENSMUST00000108856 Mia2Q91ZV0 1396 aa15.09■□□□□ 0.01
Col20a1-201ENSMUST00000108856 Arap1Q4LDD4 1452 aa15.08■□□□□ 0.01
Col20a1-201ENSMUST00000108856 Rrp7aQ9D1C9 280 aaKnown RBP15.08■□□□□ 0
Col20a1-201ENSMUST00000108856 Fyco1Q8VDC1 1437 aa15.08■□□□□ 0
Col20a1-201ENSMUST00000108856 Camsap1A2AHC3 1581 aa15.07■□□□□ 0
Col20a1-201ENSMUST00000108856 Map3k1P53349 1493 aa15.07■□□□□ 0
Col20a1-201ENSMUST00000108856 Dnajc5bQ9CQ94 199 aa15.07■□□□□ 0
Col20a1-201ENSMUST00000108856 Efcab5A0JP43 1406 aa15.06■□□□□ 0
Col20a1-201ENSMUST00000108856 Nlrp6Q91WS2 869 aa15.06■□□□□ 0
Col20a1-201ENSMUST00000108856 Dhx29Q6PGC1 1365 aaKnown RBP15.05■□□□□ 0
Col20a1-201ENSMUST00000108856 Polr3glQ8R0C0 218 aa15.03■□□□□ -0
Col20a1-201ENSMUST00000108856 Mroh2bQ7M6Y6 1581 aa15.03■□□□□ -0
Col20a1-201ENSMUST00000108856 Kif27Q7M6Z4 1394 aa15.02□□□□□ -0.01
Col20a1-201ENSMUST00000108856 Ncapd3Q6ZQK0 1506 aa15.02□□□□□ -0.01
Col20a1-201ENSMUST00000108856 Rad21Q61550 635 aaKnown RBP15.01□□□□□ -0.01
Col20a1-201ENSMUST00000108856 Arhgef5E9Q7D5 1581 aa15.01□□□□□ -0.01
Col20a1-201ENSMUST00000108856 Wdr43Q6ZQL4 677 aaKnown RBP15.01□□□□□ -0.01
Col20a1-201ENSMUST00000108856 Rpap1Q80TE0 1409 aa15.01□□□□□ -0.01
Col20a1-201ENSMUST00000108856 Lemd3Q9WU40 921 aa15.01□□□□□ -0.01
Col20a1-201ENSMUST00000108856 TnnQ80Z71 1560 aa15□□□□□ -0.01
Col20a1-201ENSMUST00000108856 ArxO35085 564 aa15□□□□□ -0.01
Col20a1-201ENSMUST00000108856 Hspa5P20029 655 aaKnown RBP14.99□□□□□ -0.01
Col20a1-201ENSMUST00000108856 Naip1Q9QWK5 1403 aa14.98□□□□□ -0.01
Col20a1-201ENSMUST00000108856 Duox2A2AQ99 1517 aa14.98□□□□□ -0.01
Col20a1-201ENSMUST00000108856 PogzQ8BZH4 1409 aaKnown RBP14.95□□□□□ -0.02
Col20a1-201ENSMUST00000108856 Rgl3Q3UYI5 709 aa14.94□□□□□ -0.02
Col20a1-201ENSMUST00000108856 Fam71e1A1L3C1 212 aa14.93□□□□□ -0.02
Col20a1-201ENSMUST00000108856 Tiam1Q60610 1591 aa14.92□□□□□ -0.02
Col20a1-201ENSMUST00000108856 Rad54l2Q99NG0 1466 aa14.91□□□□□ -0.02
Col20a1-201ENSMUST00000108856 Mtus2Q3UHD3 1353 aa14.9□□□□□ -0.02
Col20a1-201ENSMUST00000108856 SafbD3YXK2 937 aaKnown RBP14.89□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Rangap1P46061 589 aaKnown RBP14.89□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Ccnb3Q810T2 1396 aa14.88□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Arid4bA2CG63 1314 aaKnown RBP14.88□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Stk24Q99KH8 431 aa14.88□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Soga1E1U8D0 1418 aa14.87□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Kdm2aP59997 1161 aa14.87□□□□□ -0.03
Col20a1-201ENSMUST00000108856 4930567H17RikQ3V0K5 233 aa14.87□□□□□ -0.03
Col20a1-201ENSMUST00000108856 AqrQ8CFQ3 1481 aaKnown RBP14.87□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Polr1aO35134 1717 aaKnown RBP14.86□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Mroh3A0A1D5RM54 893 aa14.85□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Ggt6Q6PDE7 497 aa14.84□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Mrc2Q64449 1479 aa14.84□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Grwd1Q810D6 446 aaKnown RBP14.84□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Cabp1Q9JLK7 227 aa14.84□□□□□ -0.03
Col20a1-201ENSMUST00000108856 Upf2A2AT37 1269 aaKnown RBP14.83□□□□□ -0.04
Col20a1-201ENSMUST00000108856 Urb2E9Q7L1 1524 aaKnown RBP14.82□□□□□ -0.04
Col20a1-201ENSMUST00000108856 Ofd1Q80Z25 1017 aa14.82□□□□□ -0.04
Col20a1-201ENSMUST00000108856 Pcf11G3X9Z4 1553 aa14.81□□□□□ -0.04
Col20a1-201ENSMUST00000108856 Cux1P53564 1515 aa14.81□□□□□ -0.04
Col20a1-201ENSMUST00000108856 Fhad1A6PWD2 1420 aa14.81□□□□□ -0.04
Col20a1-201ENSMUST00000108856 NgefQ8CHT1 710 aa14.8□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 8 ms