RNA–Protein interactions for RNA: ENSMUST00000103133.3

Smarce1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarce1, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1-201ENSMUST00000103133 Sall2Q9QX96 1004 aa21.93■■□□□ 1.1
Smarce1-201ENSMUST00000103133 Csrnp3P59055 597 aa21.93■■□□□ 1.1
Smarce1-201ENSMUST00000103133 AqrQ8CFQ3 1481 aaKnown RBP21.9■■□□□ 1.1
Smarce1-201ENSMUST00000103133 Rapgef2Q8CHG7 1496 aa21.9■■□□□ 1.1
Smarce1-201ENSMUST00000103133 Mroh2bQ7M6Y6 1581 aa21.89■■□□□ 1.1
Smarce1-201ENSMUST00000103133 Rad54l2Q99NG0 1466 aa21.89■■□□□ 1.09
Smarce1-201ENSMUST00000103133 Pla2r1Q62028 1487 aa21.88■■□□□ 1.09
Smarce1-201ENSMUST00000103133 Eif4g1Q6NZJ6 1600 aaKnown RBP21.88■■□□□ 1.09
Smarce1-201ENSMUST00000103133 Map3k1P53349 1493 aa21.87■■□□□ 1.09
Smarce1-201ENSMUST00000103133 Mier1Q5UAK0 511 aa21.81■■□□□ 1.08
Smarce1-201ENSMUST00000103133 Anks4bQ8K3X6 423 aa21.78■■□□□ 1.08
Smarce1-201ENSMUST00000103133 Arhgap35Q91YM2 1499 aa21.75■■□□□ 1.07
Smarce1-201ENSMUST00000103133 Adamts12Q811B3 1600 aa21.73■■□□□ 1.07
Smarce1-201ENSMUST00000103133 NefmP08553 848 aa21.73■■□□□ 1.07
Smarce1-201ENSMUST00000103133 Carmil1Q6EDY6 1374 aa21.69■■□□□ 1.06
Smarce1-201ENSMUST00000103133 EprsQ8CGC7 1512 aaKnown RBP21.69■■□□□ 1.06
Smarce1-201ENSMUST00000103133 Polr1aO35134 1717 aaKnown RBP21.68■■□□□ 1.06
Smarce1-201ENSMUST00000103133 TchhA0A0B4J1F9 1599 aa21.67■■□□□ 1.06
Smarce1-201ENSMUST00000103133 Abca16E9PWJ7 1678 aa21.67■■□□□ 1.06
Smarce1-201ENSMUST00000103133 Cep162Q6ZQ06 1403 aa21.67■■□□□ 1.06
Smarce1-201ENSMUST00000103133 Fgd6Q69ZL1 1399 aa21.66■■□□□ 1.06
Smarce1-201ENSMUST00000103133 Ttbk1Q6PCN3 1308 aa21.66■■□□□ 1.06
Smarce1-201ENSMUST00000103133 Ppargc1bQ8VHJ7 1014 aa21.62■■□□□ 1.05
Smarce1-201ENSMUST00000103133 Map3k4O08648 1597 aa21.61■■□□□ 1.05
Smarce1-201ENSMUST00000103133 UbtfP25976 765 aaKnown RBP21.61■■□□□ 1.05
Smarce1-201ENSMUST00000103133 Zcchc11B2RX14 1644 aaKnown RBP21.61■■□□□ 1.05
Smarce1-201ENSMUST00000103133 Dnmt1P13864 1620 aaKnown RBP21.61■■□□□ 1.05
Smarce1-201ENSMUST00000103133 Npm2Q80W85 207 aa21.61■■□□□ 1.05
Smarce1-201ENSMUST00000103133 Pabpn1Q8CCS6 302 aaKnown RBP21.61■■□□□ 1.05
Smarce1-201ENSMUST00000103133 WizO88286 1684 aaKnown RBP21.6■■□□□ 1.05
Smarce1-201ENSMUST00000103133 CenpbP27790 599 aa21.6■■□□□ 1.05
Smarce1-201ENSMUST00000103133 Abcc2Q8VI47 1543 aa21.6■■□□□ 1.05
Smarce1-201ENSMUST00000103133 Rpap1Q80TE0 1409 aa21.6■■□□□ 1.05
Smarce1-201ENSMUST00000103133 Col17a1Q07563 1470 aa21.56■■□□□ 1.04
Smarce1-201ENSMUST00000103133 Abca5Q8K448 1642 aa21.55■■□□□ 1.04
Smarce1-201ENSMUST00000103133 Clip1Q922J3 1391 aa21.51■■□□□ 1.03
Smarce1-201ENSMUST00000103133 PxdnQ3UQ28 1475 aa21.51■■□□□ 1.03
Smarce1-201ENSMUST00000103133 Wdr66E9Q743 1299 aa21.5■■□□□ 1.03
Smarce1-201ENSMUST00000103133 Dnajc5P60904 198 aa21.49■■□□□ 1.03
Smarce1-201ENSMUST00000103133 Soga1E1U8D0 1418 aa21.49■■□□□ 1.03
Smarce1-201ENSMUST00000103133 Gm38655A0A286YDK6 273 aa21.48■■□□□ 1.03
Smarce1-201ENSMUST00000103133 CadpsQ80TJ1 1355 aa21.48■■□□□ 1.03
Smarce1-201ENSMUST00000103133 Myt1lP97500 1187 aa21.48■■□□□ 1.03
Smarce1-201ENSMUST00000103133 Gm7298A0A0N4SVU1 1476 aa21.46■■□□□ 1.03
Smarce1-201ENSMUST00000103133 Abcc1O35379 1528 aa21.46■■□□□ 1.03
Smarce1-201ENSMUST00000103133 Chd1P40201 1711 aa21.46■■□□□ 1.03
Smarce1-201ENSMUST00000103133 BC005561E9Q5E2 1589 aa21.45■■□□□ 1.03
Smarce1-201ENSMUST00000103133 Slx4Q6P1D7 1565 aa21.45■■□□□ 1.02
Smarce1-201ENSMUST00000103133 Fyco1Q8VDC1 1437 aa21.43■■□□□ 1.02
Smarce1-201ENSMUST00000103133 Aebp2Q9Z248 504 aaKnown RBP21.42■■□□□ 1.02
Smarce1-201ENSMUST00000103133 Aplp2Q06335 707 aa21.42■■□□□ 1.02
Smarce1-201ENSMUST00000103133 Cux1P53564 1515 aa21.41■■□□□ 1.02
Smarce1-201ENSMUST00000103133 Cdk11bP24788 784 aaKnown RBP21.39■■□□□ 1.02
Smarce1-201ENSMUST00000103133 Myt1Q8CFC2 1127 aa21.39■■□□□ 1.02
Smarce1-201ENSMUST00000103133 Erich3F6QRE9 1637 aa21.38■■□□□ 1.01
Smarce1-201ENSMUST00000103133 Cep170Q6A065 1588 aa21.37■■□□□ 1.01
Smarce1-201ENSMUST00000103133 Ankrd26Q811D2 1581 aa21.37■■□□□ 1.01
Smarce1-201ENSMUST00000103133 Gapvd1Q6PAR5 1458 aa21.36■■□□□ 1.01
Smarce1-201ENSMUST00000103133 Nop58Q6DFW4 536 aaKnown RBP21.35■■□□□ 1.01
Smarce1-201ENSMUST00000103133 Arhgef12Q8R4H2 1543 aaKnown RBP21.35■■□□□ 1.01
Smarce1-201ENSMUST00000103133 Neo1P97798 1493 aa21.33■■□□□ 1.01
Smarce1-201ENSMUST00000103133 AknaQ80VW7 1404 aa21.33■■□□□ 1.01
Smarce1-201ENSMUST00000103133 Rrbp1Q99PL5 1605 aaKnown RBP21.32■■□□□ 1
Smarce1-201ENSMUST00000103133 Gm14025A2AP89 1413 aa21.3■■□□□ 1
Smarce1-201ENSMUST00000103133 Arhgap27A2AB59 869 aa21.3■■□□□ 1
Smarce1-201ENSMUST00000103133 Pelp1Q9DBD5 1123 aaKnown RBP21.29■■□□□ 1
Smarce1-201ENSMUST00000103133 Adgrl3Q80TS3 1537 aa21.27■■□□□ 1
Smarce1-201ENSMUST00000103133 Lmo7E9PYF4 1699 aaKnown RBP21.25■□□□□ 0.99
Smarce1-201ENSMUST00000103133 Plppr3Q7TPB0 716 aa21.24■□□□□ 0.99
Smarce1-201ENSMUST00000103133 Ythdc2B2RR83 1445 aaKnown RBP21.23■□□□□ 0.99
Smarce1-201ENSMUST00000103133 PtprtQ99M80 1454 aa21.19■□□□□ 0.98
Smarce1-201ENSMUST00000103133 BlmO88700 1416 aa21.18■□□□□ 0.98
Smarce1-201ENSMUST00000103133 CatipB9EKE5 520 aa21.18■□□□□ 0.98
Smarce1-201ENSMUST00000103133 WrnO09053 1401 aa21.17■□□□□ 0.98
Smarce1-201ENSMUST00000103133 Jph4Q80WT0 628 aa21.17■□□□□ 0.98
Smarce1-201ENSMUST00000103133 Eea1Q8BL66 1411 aa21.17■□□□□ 0.98
Smarce1-201ENSMUST00000103133 AI481877A2ALV5 1481 aa21.15■□□□□ 0.98
Smarce1-201ENSMUST00000103133 ClspnQ80YR7 1315 aa21.15■□□□□ 0.98
Smarce1-201ENSMUST00000103133 Kdm5bQ80Y84 1544 aa21.15■□□□□ 0.98
Smarce1-201ENSMUST00000103133 Setbp1Q9Z180 1582 aa21.14■□□□□ 0.97
Smarce1-201ENSMUST00000103133 Plekhg3Q4VAC9 1341 aa21.12■□□□□ 0.97
Smarce1-201ENSMUST00000103133 Gm156Q58A37 223 aa21.11■□□□□ 0.97
Smarce1-201ENSMUST00000103133 Kiaa1210E9Q0C6 1637 aa21.11■□□□□ 0.97
Smarce1-201ENSMUST00000103133 Setd5Q5XJV7 1441 aa21.1■□□□□ 0.97
Smarce1-201ENSMUST00000103133 Pcf11G3X9Z4 1553 aa21.1■□□□□ 0.97
Smarce1-201ENSMUST00000103133 Arhgef5E9Q7D5 1581 aa21.09■□□□□ 0.97
Smarce1-201ENSMUST00000103133 Rapgef6Q5NCJ1 1609 aa21.09■□□□□ 0.97
Smarce1-201ENSMUST00000103133 Peg3Q3URU2 1571 aa21.08■□□□□ 0.96
Smarce1-201ENSMUST00000103133 Pprc1Q6NZN1 1644 aa21.07■□□□□ 0.96
Smarce1-201ENSMUST00000103133 Ccdc141E9Q8Q6 1531 aa21.06■□□□□ 0.96
Smarce1-201ENSMUST00000103133 Igf1rQ60751 1373 aa21.06■□□□□ 0.96
Smarce1-201ENSMUST00000103133 NhsB1AV60 1647 aa21.05■□□□□ 0.96
Smarce1-201ENSMUST00000103133 Ncoa2Q61026 1462 aa21.04■□□□□ 0.96
Smarce1-201ENSMUST00000103133 Cul7Q8VE73 1689 aa21.04■□□□□ 0.96
Smarce1-201ENSMUST00000103133 Aebp1Q640N1 1128 aa21.04■□□□□ 0.96
Smarce1-201ENSMUST00000103133 Arap1Q4LDD4 1452 aa21.02■□□□□ 0.96
Smarce1-201ENSMUST00000103133 Arhgap31A6X8Z5 1425 aa21.01■□□□□ 0.95
Smarce1-201ENSMUST00000103133 Gcc2Q8CHG3 1679 aa21.01■□□□□ 0.95
Smarce1-201ENSMUST00000103133 Wdr7Q920I9 1489 aa21.01■□□□□ 0.95
Smarce1-201ENSMUST00000103133 CntlnA2AM05 1397 aa20.99■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms