RNA–Protein interactions for RNA: ENSMUST00000098814.10

Lig1-201, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-201ENSMUST00000098814 AqrQ8CFQ3 1481 aaKnown RBP17.58■□□□□ 0.4
Lig1-201ENSMUST00000098814 TchhA0A0B4J1F9 1599 aa17.58■□□□□ 0.4
Lig1-201ENSMUST00000098814 Setd5Q5XJV7 1441 aa17.56■□□□□ 0.4
Lig1-201ENSMUST00000098814 Tiam1Q60610 1591 aa17.54■□□□□ 0.4
Lig1-201ENSMUST00000098814 Bcl11aQ9QYE3 773 aa17.52■□□□□ 0.4
Lig1-201ENSMUST00000098814 Eid3Q3V124 375 aa17.52■□□□□ 0.39
Lig1-201ENSMUST00000098814 Efcab5A0JP43 1406 aa17.5■□□□□ 0.39
Lig1-201ENSMUST00000098814 Ap3b1Q9Z1T1 1105 aa17.5■□□□□ 0.39
Lig1-201ENSMUST00000098814 Erich3F6QRE9 1637 aa17.48■□□□□ 0.39
Lig1-201ENSMUST00000098814 Gm38655A0A286YDK6 273 aa17.48■□□□□ 0.39
Lig1-201ENSMUST00000098814 Cux2P70298 1426 aa17.47■□□□□ 0.39
Lig1-201ENSMUST00000098814 Mrc2Q64449 1479 aa17.47■□□□□ 0.39
Lig1-201ENSMUST00000098814 PogzQ8BZH4 1409 aaKnown RBP17.45■□□□□ 0.38
Lig1-201ENSMUST00000098814 Naip1Q9QWK5 1403 aa17.44■□□□□ 0.38
Lig1-201ENSMUST00000098814 Tnnt3Q9QZ47 272 aa17.43■□□□□ 0.38
Lig1-201ENSMUST00000098814 Ankrd26Q811D2 1581 aa17.42■□□□□ 0.38
Lig1-201ENSMUST00000098814 Mroh2bQ7M6Y6 1581 aa17.41■□□□□ 0.38
Lig1-201ENSMUST00000098814 Hnrnpul2Q00PI9 745 aaKnown RBP17.39■□□□□ 0.37
Lig1-201ENSMUST00000098814 Il27Q8K3I6 234 aa17.39■□□□□ 0.37
Lig1-201ENSMUST00000098814 BlmO88700 1416 aa17.38■□□□□ 0.37
Lig1-201ENSMUST00000098814 LrpprcQ6PB66 1392 aaKnown RBP17.37■□□□□ 0.37
Lig1-201ENSMUST00000098814 Pbrm1Q8BSQ9 1634 aaKnown RBP17.37■□□□□ 0.37
Lig1-201ENSMUST00000098814 Slx4Q6P1D7 1565 aa17.37■□□□□ 0.37
Lig1-201ENSMUST00000098814 Pcf11G3X9Z4 1553 aa17.36■□□□□ 0.37
Lig1-201ENSMUST00000098814 Rpap1Q80TE0 1409 aa17.35■□□□□ 0.37
Lig1-201ENSMUST00000098814 Kif21aQ9QXL2 1672 aa17.33■□□□□ 0.37
Lig1-201ENSMUST00000098814 Lmo7E9PYF4 1699 aaKnown RBP17.32■□□□□ 0.36
Lig1-201ENSMUST00000098814 Crocc2F6XLV1 1638 aa17.31■□□□□ 0.36
Lig1-201ENSMUST00000098814 Duox2A2AQ99 1517 aa17.31■□□□□ 0.36
Lig1-201ENSMUST00000098814 UacaQ8CGB3 1411 aa17.31■□□□□ 0.36
Lig1-201ENSMUST00000098814 Ubl4bQ9CQ84 188 aa17.3■□□□□ 0.36
Lig1-201ENSMUST00000098814 SynmQ70IV5 1561 aa17.29■□□□□ 0.36
Lig1-201ENSMUST00000098814 Polr1aO35134 1717 aaKnown RBP17.28■□□□□ 0.36
Lig1-201ENSMUST00000098814 SafbD3YXK2 937 aaKnown RBP17.27■□□□□ 0.36
Lig1-201ENSMUST00000098814 EprsQ8CGC7 1512 aaKnown RBP17.25■□□□□ 0.35
Lig1-201ENSMUST00000098814 Peg3Q3URU2 1571 aa17.25■□□□□ 0.35
Lig1-201ENSMUST00000098814 CntlnA2AM05 1397 aa17.25■□□□□ 0.35
Lig1-201ENSMUST00000098814 Ankrd36D3Z4K0 1415 aa17.25■□□□□ 0.35
Lig1-201ENSMUST00000098814 3425401B19RikD3Z1D3 1412 aa17.24■□□□□ 0.35
Lig1-201ENSMUST00000098814 Znf710Q3U288 666 aa17.24■□□□□ 0.35
Lig1-201ENSMUST00000098814 Samd9lQ69Z37 1561 aa17.24■□□□□ 0.35
Lig1-201ENSMUST00000098814 NclP09405 707 aaKnown RBP17.24■□□□□ 0.35
Lig1-201ENSMUST00000098814 Amer1Q7TS75 1132 aa17.24■□□□□ 0.35
Lig1-201ENSMUST00000098814 Fhad1A6PWD2 1420 aa17.23■□□□□ 0.35
Lig1-201ENSMUST00000098814 Fam50aQ9WV03 339 aaKnown RBP17.23■□□□□ 0.35
Lig1-201ENSMUST00000098814 Mapk8ip2Q9ERE9 830 aa17.22■□□□□ 0.35
Lig1-201ENSMUST00000098814 Stra8P70278 393 aa17.21■□□□□ 0.35
Lig1-201ENSMUST00000098814 Cux1P53564 1515 aa17.2■□□□□ 0.34
Lig1-201ENSMUST00000098814 Ccer2J3QPU5 274 aa17.2■□□□□ 0.34
Lig1-201ENSMUST00000098814 Mia2Q91ZV0 1396 aa17.19■□□□□ 0.34
Lig1-201ENSMUST00000098814 Fam71e1A1L3C1 212 aa17.19■□□□□ 0.34
Lig1-201ENSMUST00000098814 Carmil1Q6EDY6 1374 aa17.19■□□□□ 0.34
Lig1-201ENSMUST00000098814 Gm13697A2AK42 830 aa17.19■□□□□ 0.34
Lig1-201ENSMUST00000098814 Fyco1Q8VDC1 1437 aa17.18■□□□□ 0.34
Lig1-201ENSMUST00000098814 Dhx29Q6PGC1 1365 aaKnown RBP17.18■□□□□ 0.34
Lig1-201ENSMUST00000098814 Vps8Q0P5W1 1427 aa17.17■□□□□ 0.34
Lig1-201ENSMUST00000098814 Lmod2Q3UHZ5 550 aa17.15■□□□□ 0.34
Lig1-201ENSMUST00000098814 PrkcshO08795 521 aa17.15■□□□□ 0.34
Lig1-201ENSMUST00000098814 Hspa5P20029 655 aaKnown RBP17.15■□□□□ 0.34
Lig1-201ENSMUST00000098814 Camsap2Q8C1B1 1461 aa17.14■□□□□ 0.33
Lig1-201ENSMUST00000098814 Urb2E9Q7L1 1524 aaKnown RBP17.14■□□□□ 0.33
Lig1-201ENSMUST00000098814 Npm1Q61937 292 aaKnown RBP17.12■□□□□ 0.33
Lig1-201ENSMUST00000098814 Ift140E9PY46 1464 aa17.11■□□□□ 0.33
Lig1-201ENSMUST00000098814 Naip2Q9QUK4 1447 aa17.11■□□□□ 0.33
Lig1-201ENSMUST00000098814 Adamts12Q811B3 1600 aa17.11■□□□□ 0.33
Lig1-201ENSMUST00000098814 Magi3Q9EQJ9 1476 aa17.09■□□□□ 0.33
Lig1-201ENSMUST00000098814 Abca5Q8K448 1642 aa17.08■□□□□ 0.32
Lig1-201ENSMUST00000098814 Gm1043A0A140LJC2 1431 aa17.07■□□□□ 0.32
Lig1-201ENSMUST00000098814 Gm7298A0A0N4SVU1 1476 aa17.07■□□□□ 0.32
Lig1-201ENSMUST00000098814 Lrriq1Q0P5X1 1673 aa17.06■□□□□ 0.32
Lig1-201ENSMUST00000098814 Nup160Q9Z0W3 1402 aaKnown RBP17.05■□□□□ 0.32
Lig1-201ENSMUST00000098814 Anp32aO35381 247 aa17.05■□□□□ 0.32
Lig1-201ENSMUST00000098814 Pla2r1Q62028 1487 aa17.05■□□□□ 0.32
Lig1-201ENSMUST00000098814 Cul7Q8VE73 1689 aa17.04■□□□□ 0.32
Lig1-201ENSMUST00000098814 Ncoa2Q61026 1462 aa17.04■□□□□ 0.32
Lig1-201ENSMUST00000098814 Disp1Q3TDN0 1521 aa17.02■□□□□ 0.32
Lig1-201ENSMUST00000098814 Setd1bQ8CFT2 1985 aa17.02■□□□□ 0.32
Lig1-201ENSMUST00000098814 Naip5Q9R016 1403 aa17.02■□□□□ 0.32
Lig1-201ENSMUST00000098814 Aebp1Q640N1 1128 aa17.02■□□□□ 0.32
Lig1-201ENSMUST00000098814 Smg6P61406 1418 aaKnown RBP17.01■□□□□ 0.31
Lig1-201ENSMUST00000098814 A2mQ6GQT1 1474 aa17.01■□□□□ 0.31
Lig1-201ENSMUST00000098814 Dennd4bQ3U1Y4 1499 aa17■□□□□ 0.31
Lig1-201ENSMUST00000098814 Fhod3Q76LL6 1578 aa16.98■□□□□ 0.31
Lig1-201ENSMUST00000098814 Eif4g3Q80XI3 1579 aaKnown RBP16.98■□□□□ 0.31
Lig1-201ENSMUST00000098814 Grin2aP35436 1464 aa16.98■□□□□ 0.31
Lig1-201ENSMUST00000098814 Calr4Q3TQS0 420 aa16.98■□□□□ 0.31
Lig1-201ENSMUST00000098814 Plb1Q3TTY0 1478 aa16.96■□□□□ 0.31
Lig1-201ENSMUST00000098814 Dnajc5bQ9CQ94 199 aa16.95■□□□□ 0.3
Lig1-201ENSMUST00000098814 Sin3aQ60520 1274 aaKnown RBP16.95■□□□□ 0.3
Lig1-201ENSMUST00000098814 Lmtk2Q3TYD6 1471 aa16.92■□□□□ 0.3
Lig1-201ENSMUST00000098814 Cc2d2bA0A286YDU8 1405 aa16.92■□□□□ 0.3
Lig1-201ENSMUST00000098814 Pprc1Q6NZN1 1644 aa16.92■□□□□ 0.3
Lig1-201ENSMUST00000098814 Soga1E1U8D0 1418 aa16.9■□□□□ 0.3
Lig1-201ENSMUST00000098814 Abca16E9PWJ7 1678 aa16.9■□□□□ 0.3
Lig1-201ENSMUST00000098814 Ccnb3Q810T2 1396 aa16.9■□□□□ 0.3
Lig1-201ENSMUST00000098814 Rusc2Q80U22 1514 aa16.89■□□□□ 0.29
Lig1-201ENSMUST00000098814 Nolc1E9Q5C9 702 aaKnown RBP16.89■□□□□ 0.29
Lig1-201ENSMUST00000098814 Setbp1Q9Z180 1582 aa16.86■□□□□ 0.29
Lig1-201ENSMUST00000098814 Ube2uB1AUC4 352 aa16.85■□□□□ 0.29
Lig1-201ENSMUST00000098814 Chic2Q9D9G3 165 aa16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms