RNA–Protein interactions for RNA: ENSMUST00000090806.4

Rai1-202, Transcript of Retinoic acid-induced protein 1, mousemouse

TSL 1 (best) BASIC

Gene Rai1, Length 7,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-202ENSMUST00000090806 CanxP35564 591 aaKnown RBP17.23■□□□□ 0.35
Rai1-202ENSMUST00000090806 PtmaP26350 111 aa17.21■□□□□ 0.35
Rai1-202ENSMUST00000090806 Trim30dE9PWL0 497 aa17.15■□□□□ 0.34
Rai1-202ENSMUST00000090806 Fkbp15Q6P9Q6 1216 aaKnown RBP17.15■□□□□ 0.34
Rai1-202ENSMUST00000090806 Htatsf1Q8BGC0 757 aa17.13■□□□□ 0.33
Rai1-202ENSMUST00000090806 Cep164Q5DU05 1446 aa17.12■□□□□ 0.33
Rai1-202ENSMUST00000090806 Fam71e1A1L3C1 212 aa17.1■□□□□ 0.33
Rai1-202ENSMUST00000090806 Ccdc27Q3V036 639 aa17.09■□□□□ 0.33
Rai1-202ENSMUST00000090806 Trim26Q99PN3 545 aa17.09■□□□□ 0.33
Rai1-202ENSMUST00000090806 Plcb2A3KGF7 1181 aa17.06■□□□□ 0.32
Rai1-202ENSMUST00000090806 Brd4Q9ESU6 1400 aaKnown RBP17.06■□□□□ 0.32
Rai1-202ENSMUST00000090806 Clstn2Q9ER65 966 aa17.06■□□□□ 0.32
Rai1-202ENSMUST00000090806 Chic2Q9D9G3 165 aa17.05■□□□□ 0.32
Rai1-202ENSMUST00000090806 Adam1bQ8R534 806 aa17.02■□□□□ 0.32
Rai1-202ENSMUST00000090806 Arid4bA2CG63 1314 aaKnown RBP17.02■□□□□ 0.31
Rai1-202ENSMUST00000090806 Znf326O88291 580 aa16.99■□□□□ 0.31
Rai1-202ENSMUST00000090806 Ofd1Q80Z25 1017 aa16.99■□□□□ 0.31
Rai1-202ENSMUST00000090806 1700123L14RikQ3V2K7 440 aa16.97■□□□□ 0.31
Rai1-202ENSMUST00000090806 Ppm1gQ61074 542 aa16.97■□□□□ 0.31
Rai1-202ENSMUST00000090806 BlmO88700 1416 aa16.96■□□□□ 0.31
Rai1-202ENSMUST00000090806 Plppr3Q7TPB0 716 aa16.96■□□□□ 0.3
Rai1-202ENSMUST00000090806 PnnO35691 725 aaKnown RBP16.92■□□□□ 0.3
Rai1-202ENSMUST00000090806 P3h3Q8CG70 732 aa16.89■□□□□ 0.29
Rai1-202ENSMUST00000090806 Casc1Q6TDU8 730 aa16.88■□□□□ 0.29
Rai1-202ENSMUST00000090806 Map7O88735 730 aa16.88■□□□□ 0.29
Rai1-202ENSMUST00000090806 Tnnt2P50752 301 aa16.88■□□□□ 0.29
Rai1-202ENSMUST00000090806 Rgl3Q3UYI5 709 aa16.85■□□□□ 0.29
Rai1-202ENSMUST00000090806 Irx6Q9ER75 438 aa16.85■□□□□ 0.29
Rai1-202ENSMUST00000090806 Irx3P81067 507 aa16.85■□□□□ 0.29
Rai1-202ENSMUST00000090806 Chmp4bQ9D8B3 224 aaKnown RBP16.84■□□□□ 0.29
Rai1-202ENSMUST00000090806 Safb2Q80YR5 991 aaKnown RBP16.83■□□□□ 0.28
Rai1-202ENSMUST00000090806 Apbb1Q9QXJ1 710 aa16.83■□□□□ 0.28
Rai1-202ENSMUST00000090806 Bcl11aQ9QYE3 773 aa16.83■□□□□ 0.28
Rai1-202ENSMUST00000090806 IqubQ8CDK3 788 aa16.82■□□□□ 0.28
Rai1-202ENSMUST00000090806 Znf316Q6PGE4 1016 aa16.81■□□□□ 0.28
Rai1-202ENSMUST00000090806 AU015836B2RUM3 263 aa16.79■□□□□ 0.28
Rai1-202ENSMUST00000090806 Mapk8ip3Q9ESN9 1337 aa16.78■□□□□ 0.28
Rai1-202ENSMUST00000090806 Spryd3E9Q9B3 442 aa16.78■□□□□ 0.28
Rai1-202ENSMUST00000090806 Pes1Q9EQ61 584 aaKnown RBP16.76■□□□□ 0.27
Rai1-202ENSMUST00000090806 Neurod2Q62414 383 aa16.76■□□□□ 0.27
Rai1-202ENSMUST00000090806 Dbr1Q923B1 550 aa16.76■□□□□ 0.27
Rai1-202ENSMUST00000090806 Cwc22Q8C5N3 908 aaKnown RBP16.75■□□□□ 0.27
Rai1-202ENSMUST00000090806 Aebp2Q9Z248 504 aaKnown RBP16.75■□□□□ 0.27
Rai1-202ENSMUST00000090806 Card11Q8CIS0 1159 aa16.73■□□□□ 0.27
Rai1-202ENSMUST00000090806 Erich6bQ9D4S6 220 aa16.73■□□□□ 0.27
Rai1-202ENSMUST00000090806 Mbd3Q9Z2D8 285 aaKnown RBP16.72■□□□□ 0.27
Rai1-202ENSMUST00000090806 Calcoco2A2A6M5 331 aa16.72■□□□□ 0.27
Rai1-202ENSMUST00000090806 Setd5Q5XJV7 1441 aa16.72■□□□□ 0.27
Rai1-202ENSMUST00000090806 Dnttip2Q8R2M2 758 aaKnown RBP16.72■□□□□ 0.27
Rai1-202ENSMUST00000090806 Exosc9Q9JHI7 438 aaKnown RBP16.71■□□□□ 0.27
Rai1-202ENSMUST00000090806 MccE9PWI3 1003 aa16.71■□□□□ 0.26
Rai1-202ENSMUST00000090806 Ubl4bQ9CQ84 188 aa16.71■□□□□ 0.26
Rai1-202ENSMUST00000090806 KnstrnQ9D9Z1 312 aaKnown RBP16.7■□□□□ 0.26
Rai1-202ENSMUST00000090806 Srpk2O54781 681 aaKnown RBP16.7■□□□□ 0.26
Rai1-202ENSMUST00000090806 Mak16Q8BGS0 296 aaKnown RBP16.7■□□□□ 0.26
Rai1-202ENSMUST00000090806 Kdm2aP59997 1161 aa16.69■□□□□ 0.26
Rai1-202ENSMUST00000090806 Gm973E9Q295 1059 aa16.69■□□□□ 0.26
Rai1-202ENSMUST00000090806 NudcO35685 332 aaKnown RBP16.69■□□□□ 0.26
Rai1-202ENSMUST00000090806 Armcx1Q9CX83 456 aa16.69■□□□□ 0.26
Rai1-202ENSMUST00000090806 Gm6268A2A3U9 297 aa16.68■□□□□ 0.26
Rai1-202ENSMUST00000090806 Wwc2Q6NXJ0 1187 aa16.68■□□□□ 0.26
Rai1-202ENSMUST00000090806 Grwd1Q810D6 446 aaKnown RBP16.68■□□□□ 0.26
Rai1-202ENSMUST00000090806 B4galnt3Q6L8S8 986 aa16.68■□□□□ 0.26
Rai1-202ENSMUST00000090806 Hsp90b1P08113 802 aaKnown RBP16.67■□□□□ 0.26
Rai1-202ENSMUST00000090806 Iqcf3Q9D498 203 aa16.67■□□□□ 0.26
Rai1-202ENSMUST00000090806 MsnP26041 577 aaKnown RBP16.66■□□□□ 0.26
Rai1-202ENSMUST00000090806 Clstn1Q9EPL2 979 aa16.65■□□□□ 0.26
Rai1-202ENSMUST00000090806 PtmsQ9D0J8 101 aaKnown RBP16.65■□□□□ 0.26
Rai1-202ENSMUST00000090806 Gm20521D3Z5F7 333 aa16.65■□□□□ 0.26
Rai1-202ENSMUST00000090806 Mroh3A0A1D5RM54 893 aa16.64■□□□□ 0.25
Rai1-202ENSMUST00000090806 Rb1cc1Q9ESK9 1588 aa16.64■□□□□ 0.25
Rai1-202ENSMUST00000090806 Zfp777B9EKF4 885 aa16.62■□□□□ 0.25
Rai1-202ENSMUST00000090806 Rtn4Q99P72 1162 aaKnown RBP16.62■□□□□ 0.25
Rai1-202ENSMUST00000090806 Pcmtd1P59913 357 aa16.61■□□□□ 0.25
Rai1-202ENSMUST00000090806 Abcc8B2RUS7 1588 aa16.6■□□□□ 0.25
Rai1-202ENSMUST00000090806 Rwdd1Q9CQK7 243 aa16.6■□□□□ 0.25
Rai1-202ENSMUST00000090806 Sh3bp5Q9Z131 463 aa16.6■□□□□ 0.25
Rai1-202ENSMUST00000090806 Tcerg1Q8CGF7 1100 aaKnown RBP16.58■□□□□ 0.24
Rai1-202ENSMUST00000090806 SetQ9EQU5 289 aaKnown RBP16.57■□□□□ 0.24
Rai1-202ENSMUST00000090806 HnrnpuQ8VEK3 800 aaKnown RBP16.57■□□□□ 0.24
Rai1-202ENSMUST00000090806 Dnai1Q8C0M8 701 aa16.55■□□□□ 0.24
Rai1-202ENSMUST00000090806 Rrp12Q6P5B0 1295 aaKnown RBP16.54■□□□□ 0.24
Rai1-202ENSMUST00000090806 1700019A02RikA0A087WPV9 146 aa16.54■□□□□ 0.24
Rai1-202ENSMUST00000090806 SafbD3YXK2 937 aaKnown RBP16.54■□□□□ 0.24
Rai1-202ENSMUST00000090806 Stag3O70576 1240 aa16.53■□□□□ 0.24
Rai1-202ENSMUST00000090806 Slc4a3P16283 1227 aa16.52■□□□□ 0.24
Rai1-202ENSMUST00000090806 Ipo9Q91YE6 1041 aa16.52■□□□□ 0.24
Rai1-202ENSMUST00000090806 Anapc15P60007 132 aa16.52■□□□□ 0.23
Rai1-202ENSMUST00000090806 Eea1Q8BL66 1411 aa16.51■□□□□ 0.23
Rai1-202ENSMUST00000090806 RdxP26043 583 aaKnown RBP16.51■□□□□ 0.23
Rai1-202ENSMUST00000090806 Supt16hQ920B9 1047 aa16.51■□□□□ 0.23
Rai1-202ENSMUST00000090806 EspnQ9ET47 871 aa16.51■□□□□ 0.23
Rai1-202ENSMUST00000090806 Cald1E9QA15 768 aaKnown RBP16.5■□□□□ 0.23
Rai1-202ENSMUST00000090806 Rassf8Q8CJ96 419 aa16.47■□□□□ 0.23
Rai1-202ENSMUST00000090806 Chmp5Q9D7S9 219 aa16.47■□□□□ 0.23
Rai1-202ENSMUST00000090806 NgefQ8CHT1 710 aa16.46■□□□□ 0.23
Rai1-202ENSMUST00000090806 Pde3bQ61409 1100 aa16.46■□□□□ 0.23
Rai1-202ENSMUST00000090806 Mia2Q91ZV0 1396 aa16.46■□□□□ 0.23
Rai1-202ENSMUST00000090806 Kiaa0754Q69ZZ9 979 aa16.45■□□□□ 0.22
Rai1-202ENSMUST00000090806 Mtus2Q3UHD3 1353 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms