RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Pds5bQ4VA53 1446 aaKnown RBP21.88■■□□□ 1.09
Col18a1-202ENSMUST00000081654 Anks4bQ8K3X6 423 aa21.88■■□□□ 1.09
Col18a1-202ENSMUST00000081654 Rgl3Q3UYI5 709 aa21.86■■□□□ 1.09
Col18a1-202ENSMUST00000081654 DiexfQ8BTT6 772 aaKnown RBP21.82■■□□□ 1.08
Col18a1-202ENSMUST00000081654 Rad21Q61550 635 aaKnown RBP21.81■■□□□ 1.08
Col18a1-202ENSMUST00000081654 DaxxO35613 739 aa21.8■■□□□ 1.08
Col18a1-202ENSMUST00000081654 P3h3Q8CG70 732 aa21.8■■□□□ 1.08
Col18a1-202ENSMUST00000081654 Csrnp3P59055 597 aa21.79■■□□□ 1.08
Col18a1-202ENSMUST00000081654 Calr4Q3TQS0 420 aa21.78■■□□□ 1.08
Col18a1-202ENSMUST00000081654 Mtus2Q3UHD3 1353 aa21.73■■□□□ 1.07
Col18a1-202ENSMUST00000081654 IqubQ8CDK3 788 aa21.7■■□□□ 1.06
Col18a1-202ENSMUST00000081654 Rangap1P46061 589 aaKnown RBP21.69■■□□□ 1.06
Col18a1-202ENSMUST00000081654 Mroh3A0A1D5RM54 893 aa21.67■■□□□ 1.06
Col18a1-202ENSMUST00000081654 Mia2Q91ZV0 1396 aa21.66■■□□□ 1.06
Col18a1-202ENSMUST00000081654 Rrp7aQ9D1C9 280 aaKnown RBP21.66■■□□□ 1.06
Col18a1-202ENSMUST00000081654 Srpk2O54781 681 aaKnown RBP21.65■■□□□ 1.06
Col18a1-202ENSMUST00000081654 ArxO35085 564 aa21.65■■□□□ 1.06
Col18a1-202ENSMUST00000081654 Fmn1Q05860 1466 aa21.65■■□□□ 1.06
Col18a1-202ENSMUST00000081654 Ppp4r2Q0VGB7 417 aa21.64■■□□□ 1.05
Col18a1-202ENSMUST00000081654 Kdm2aP59997 1161 aa21.64■■□□□ 1.05
Col18a1-202ENSMUST00000081654 Grwd1Q810D6 446 aaKnown RBP21.62■■□□□ 1.05
Col18a1-202ENSMUST00000081654 Cwc22Q8C5N3 908 aaKnown RBP21.62■■□□□ 1.05
Col18a1-202ENSMUST00000081654 Sycp2Q9CUU3 1500 aa21.61■■□□□ 1.05
Col18a1-202ENSMUST00000081654 Card11Q8CIS0 1159 aa21.61■■□□□ 1.05
Col18a1-202ENSMUST00000081654 Gm38655A0A286YDK6 273 aa21.59■■□□□ 1.05
Col18a1-202ENSMUST00000081654 Aplp2Q06335 707 aa21.58■■□□□ 1.05
Col18a1-202ENSMUST00000081654 Gm20521D3Z5F7 333 aa21.57■■□□□ 1.04
Col18a1-202ENSMUST00000081654 Wdr43Q6ZQL4 677 aaKnown RBP21.56■■□□□ 1.04
Col18a1-202ENSMUST00000081654 Fgd1P52734 960 aa21.55■■□□□ 1.04
Col18a1-202ENSMUST00000081654 Kif27Q7M6Z4 1394 aa21.54■■□□□ 1.04
Col18a1-202ENSMUST00000081654 Cep162Q6ZQ06 1403 aa21.52■■□□□ 1.03
Col18a1-202ENSMUST00000081654 Exosc9Q9JHI7 438 aaKnown RBP21.51■■□□□ 1.03
Col18a1-202ENSMUST00000081654 Ccdc88bQ4QRL3 1481 aa21.51■■□□□ 1.03
Col18a1-202ENSMUST00000081654 Crybg2B7ZCC2 1516 aa21.51■■□□□ 1.03
Col18a1-202ENSMUST00000081654 Aebp2Q9Z248 504 aaKnown RBP21.5■■□□□ 1.03
Col18a1-202ENSMUST00000081654 Ofd1Q80Z25 1017 aa21.46■■□□□ 1.03
Col18a1-202ENSMUST00000081654 Trim26Q99PN3 545 aa21.45■■□□□ 1.02
Col18a1-202ENSMUST00000081654 Stk24Q99KH8 431 aa21.44■■□□□ 1.02
Col18a1-202ENSMUST00000081654 Aebp1Q640N1 1128 aa21.42■■□□□ 1.02
Col18a1-202ENSMUST00000081654 CftrP26361 1476 aa21.39■■□□□ 1.01
Col18a1-202ENSMUST00000081654 Stag3O70576 1240 aa21.38■■□□□ 1.01
Col18a1-202ENSMUST00000081654 Cux2P70298 1426 aa21.37■■□□□ 1.01
Col18a1-202ENSMUST00000081654 Mapk8ip3Q9ESN9 1337 aa21.36■■□□□ 1.01
Col18a1-202ENSMUST00000081654 Map4P27546 1125 aaKnown RBP21.35■■□□□ 1.01
Col18a1-202ENSMUST00000081654 AknaQ80VW7 1404 aa21.35■■□□□ 1.01
Col18a1-202ENSMUST00000081654 Fyco1Q8VDC1 1437 aa21.35■■□□□ 1.01
Col18a1-202ENSMUST00000081654 Rpap1Q80TE0 1409 aa21.34■■□□□ 1.01
Col18a1-202ENSMUST00000081654 Zfp777B9EKF4 885 aa21.34■■□□□ 1.01
Col18a1-202ENSMUST00000081654 Phldb1Q6PDH0 1371 aaKnown RBP21.33■■□□□ 1
Col18a1-202ENSMUST00000081654 CntlnA2AM05 1397 aa21.3■■□□□ 1
Col18a1-202ENSMUST00000081654 MyclP10166 368 aa21.3■■□□□ 1
Col18a1-202ENSMUST00000081654 Ppp1r18Q8BQ30 594 aa21.3■■□□□ 1
Col18a1-202ENSMUST00000081654 Baz1bQ9Z277 1479 aa21.3■■□□□ 1
Col18a1-202ENSMUST00000081654 Hspa5P20029 655 aaKnown RBP21.3■■□□□ 1
Col18a1-202ENSMUST00000081654 Pkd2O35245 966 aa21.28■■□□□ 1
Col18a1-202ENSMUST00000081654 Atad2bE9Q166 1460 aaKnown RBP21.28■■□□□ 1
Col18a1-202ENSMUST00000081654 Irx6Q9ER75 438 aa21.27■■□□□ 1
Col18a1-202ENSMUST00000081654 Iqcf3Q9D498 203 aa21.26■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Trim30dE9PWL0 497 aa21.24■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Arid3cA6PWV5 409 aa21.23■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Hsp90aa1P07901 733 aaKnown RBP21.23■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Lemd3Q9WU40 921 aa21.23■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Cecr2E9Q2Z1 1453 aa21.23■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Dhx57Q6P5D3 1388 aaKnown RBP21.23■□□□□ 0.99
Col18a1-202ENSMUST00000081654 NgefQ8CHT1 710 aa21.22■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Neurod2Q62414 383 aa21.22■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Arhgap35Q91YM2 1499 aa21.21■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Hsp90ab1P11499 724 aaKnown RBP21.21■□□□□ 0.99
Col18a1-202ENSMUST00000081654 Carmil1Q6EDY6 1374 aa21.2■□□□□ 0.98
Col18a1-202ENSMUST00000081654 Chmp4bQ9D8B3 224 aaKnown RBP21.2■□□□□ 0.98
Col18a1-202ENSMUST00000081654 Smarca2Q6DIC0 1577 aa21.19■□□□□ 0.98
Col18a1-202ENSMUST00000081654 NudcO35685 332 aaKnown RBP21.19■□□□□ 0.98
Col18a1-202ENSMUST00000081654 Cabp1Q9JLK7 227 aa21.18■□□□□ 0.98
Col18a1-202ENSMUST00000081654 Fhad1A6PWD2 1420 aa21.17■□□□□ 0.98
Col18a1-202ENSMUST00000081654 Rundc1Q0VDN7 615 aa21.16■□□□□ 0.98
Col18a1-202ENSMUST00000081654 Apbb1Q9QXJ1 710 aa21.16■□□□□ 0.98
Col18a1-202ENSMUST00000081654 DekQ7TNV0 380 aaKnown RBP21.16■□□□□ 0.98
Col18a1-202ENSMUST00000081654 CanxP35564 591 aaKnown RBP21.15■□□□□ 0.98
Col18a1-202ENSMUST00000081654 Trak1Q6PD31 939 aa21.14■□□□□ 0.98
Col18a1-202ENSMUST00000081654 Cnga1P29974 684 aa21.14■□□□□ 0.97
Col18a1-202ENSMUST00000081654 Mphosph9A6H5Y1 991 aa21.13■□□□□ 0.97
Col18a1-202ENSMUST00000081654 Synj1Q8CHC4 1574 aa21.13■□□□□ 0.97
Col18a1-202ENSMUST00000081654 Smarca4Q3TKT4 1613 aaKnown RBP21.12■□□□□ 0.97
Col18a1-202ENSMUST00000081654 Gtf2e1Q9D0D5 440 aa21.11■□□□□ 0.97
Col18a1-202ENSMUST00000081654 Ifit1bl1D3Z6F0 470 aa21.11■□□□□ 0.97
Col18a1-202ENSMUST00000081654 Gm6268A2A3U9 297 aa21.1■□□□□ 0.97
Col18a1-202ENSMUST00000081654 LrpprcQ6PB66 1392 aaKnown RBP21.06■□□□□ 0.96
Col18a1-202ENSMUST00000081654 Wwc2Q6NXJ0 1187 aa21.04■□□□□ 0.96
Col18a1-202ENSMUST00000081654 Plekhh2Q8C115 1491 aa21.04■□□□□ 0.96
Col18a1-202ENSMUST00000081654 Tmf1B9EKI3 1091 aa21.04■□□□□ 0.96
Col18a1-202ENSMUST00000081654 Rapgef2Q8CHG7 1496 aa21.03■□□□□ 0.96
Col18a1-202ENSMUST00000081654 Nup155Q99P88 1391 aaKnown RBP21.03■□□□□ 0.96
Col18a1-202ENSMUST00000081654 Map7O88735 730 aa21.02■□□□□ 0.96
Col18a1-202ENSMUST00000081654 ScribQ80U72 1612 aa21.02■□□□□ 0.96
Col18a1-202ENSMUST00000081654 Rsph4aQ8BYM7 716 aa21.01■□□□□ 0.95
Col18a1-202ENSMUST00000081654 Mbd3Q9Z2D8 285 aaKnown RBP21.01■□□□□ 0.95
Col18a1-202ENSMUST00000081654 1700019A02RikA0A087WPV9 146 aa21■□□□□ 0.95
Col18a1-202ENSMUST00000081654 Stk26Q99JT2 416 aa21■□□□□ 0.95
Col18a1-202ENSMUST00000081654 Arid4bA2CG63 1314 aaKnown RBP20.99■□□□□ 0.95
Col18a1-202ENSMUST00000081654 Vsig10D3YX43 558 aa20.99■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms