RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Calr4Q3TQS0 420 aa16.14■□□□□ 0.17
Ssh1-201ENSMUST00000077689 Plppr3Q7TPB0 716 aa16.12■□□□□ 0.17
Ssh1-201ENSMUST00000077689 Ccdc9Q8VC31 543 aaKnown RBP16.1■□□□□ 0.17
Ssh1-201ENSMUST00000077689 Zfp777B9EKF4 885 aa16.09■□□□□ 0.17
Ssh1-201ENSMUST00000077689 Frmpd1A2AKB4 1549 aa16.09■□□□□ 0.17
Ssh1-201ENSMUST00000077689 Kif15Q6P9L6 1387 aa16.08■□□□□ 0.16
Ssh1-201ENSMUST00000077689 Clip1Q922J3 1391 aa16.08■□□□□ 0.16
Ssh1-201ENSMUST00000077689 Plekhg3Q4VAC9 1341 aa16.06■□□□□ 0.16
Ssh1-201ENSMUST00000077689 Ercc6F8VPZ5 1481 aa16.05■□□□□ 0.16
Ssh1-201ENSMUST00000077689 Ppp4r2Q0VGB7 417 aa16.04■□□□□ 0.16
Ssh1-201ENSMUST00000077689 Wdr62Q3U3T8 1523 aa16.03■□□□□ 0.16
Ssh1-201ENSMUST00000077689 Znf710Q3U288 666 aa16.03■□□□□ 0.16
Ssh1-201ENSMUST00000077689 Hsp90aa1P07901 733 aaKnown RBP16.01■□□□□ 0.15
Ssh1-201ENSMUST00000077689 Pak3Q61036 559 aa15.99■□□□□ 0.15
Ssh1-201ENSMUST00000077689 4933416C03RikQ3V063 378 aa15.99■□□□□ 0.15
Ssh1-201ENSMUST00000077689 Rtn4Q99P72 1162 aaKnown RBP15.98■□□□□ 0.15
Ssh1-201ENSMUST00000077689 TnnQ80Z71 1560 aa15.97■□□□□ 0.15
Ssh1-201ENSMUST00000077689 Gtf3c5Q8R2T8 520 aa15.96■□□□□ 0.15
Ssh1-201ENSMUST00000077689 Taok2Q6ZQ29 1240 aa15.95■□□□□ 0.14
Ssh1-201ENSMUST00000077689 PtprkP35822 1457 aa15.94■□□□□ 0.14
Ssh1-201ENSMUST00000077689 Wdr43Q6ZQL4 677 aaKnown RBP15.93■□□□□ 0.14
Ssh1-201ENSMUST00000077689 Stra8P70278 393 aa15.92■□□□□ 0.14
Ssh1-201ENSMUST00000077689 Lamc3Q9R0B6 1581 aa15.91■□□□□ 0.14
Ssh1-201ENSMUST00000077689 AampJ3QN89 436 aa15.9■□□□□ 0.14
Ssh1-201ENSMUST00000077689 Kcnn1Q9EQR3 537 aa15.9■□□□□ 0.14
Ssh1-201ENSMUST00000077689 Arhgap35Q91YM2 1499 aa15.9■□□□□ 0.14
Ssh1-201ENSMUST00000077689 Ccdc18Q640L5 1455 aa15.87■□□□□ 0.13
Ssh1-201ENSMUST00000077689 Ubl4bQ9CQ84 188 aa15.86■□□□□ 0.13
Ssh1-201ENSMUST00000077689 Eea1Q8BL66 1411 aa15.85■□□□□ 0.13
Ssh1-201ENSMUST00000077689 Npm1Q61937 292 aaKnown RBP15.85■□□□□ 0.13
Ssh1-201ENSMUST00000077689 Eif4g1Q6NZJ6 1600 aaKnown RBP15.85■□□□□ 0.13
Ssh1-201ENSMUST00000077689 Setd5Q5XJV7 1441 aa15.84■□□□□ 0.13
Ssh1-201ENSMUST00000077689 NrkQ9R0G8 1455 aa15.84■□□□□ 0.13
Ssh1-201ENSMUST00000077689 BccipQ9CWI3 316 aa15.83■□□□□ 0.12
Ssh1-201ENSMUST00000077689 DaxxO35613 739 aa15.83■□□□□ 0.12
Ssh1-201ENSMUST00000077689 Shroom4Q1W617 1475 aa15.82■□□□□ 0.12
Ssh1-201ENSMUST00000077689 Camsap1A2AHC3 1581 aa15.82■□□□□ 0.12
Ssh1-201ENSMUST00000077689 Ccer2J3QPU5 274 aa15.82■□□□□ 0.12
Ssh1-201ENSMUST00000077689 CatipB9EKE5 520 aa15.81■□□□□ 0.12
Ssh1-201ENSMUST00000077689 Znf692Q3U381 531 aa15.8■□□□□ 0.12
Ssh1-201ENSMUST00000077689 Phldb1Q6PDH0 1371 aaKnown RBP15.8■□□□□ 0.12
Ssh1-201ENSMUST00000077689 Egfem1Q8C088 590 aa15.79■□□□□ 0.12
Ssh1-201ENSMUST00000077689 Liat1Q810M6 228 aa15.77■□□□□ 0.12
Ssh1-201ENSMUST00000077689 NgefQ8CHT1 710 aa15.77■□□□□ 0.12
Ssh1-201ENSMUST00000077689 Cux2P70298 1426 aa15.77■□□□□ 0.12
Ssh1-201ENSMUST00000077689 Slc24a1Q91WD8 1130 aa15.75■□□□□ 0.11
Ssh1-201ENSMUST00000077689 Grin2bQ01097 1482 aa15.75■□□□□ 0.11
Ssh1-201ENSMUST00000077689 Arap1Q4LDD4 1452 aa15.75■□□□□ 0.11
Ssh1-201ENSMUST00000077689 Unc13aQ4KUS2 1712 aa15.75■□□□□ 0.11
Ssh1-201ENSMUST00000077689 NeflP08551 543 aa15.74■□□□□ 0.11
Ssh1-201ENSMUST00000077689 Zbtb4Q5F293 982 aa15.73■□□□□ 0.11
Ssh1-201ENSMUST00000077689 Baz1bQ9Z277 1479 aa15.73■□□□□ 0.11
Ssh1-201ENSMUST00000077689 Ipo9Q91YE6 1041 aa15.72■□□□□ 0.11
Ssh1-201ENSMUST00000077689 Eif5bQ05D44 1216 aaKnown RBP15.71■□□□□ 0.11
Ssh1-201ENSMUST00000077689 Map3k1P53349 1493 aa15.7■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Washc2Q6PGL7 1334 aa15.69■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Pdcl3Q8BVF2 240 aa15.69■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Scaf1Q5U4C3 1256 aaKnown RBP15.68■□□□□ 0.1
Ssh1-201ENSMUST00000077689 BlmO88700 1416 aa15.67■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Ncapd3Q6ZQK0 1506 aa15.67■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Mroh2bQ7M6Y6 1581 aa15.67■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Lmod2Q3UHZ5 550 aa15.67■□□□□ 0.1
Ssh1-201ENSMUST00000077689 DmtnQ9WV69 405 aa15.66■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Arhgef5E9Q7D5 1581 aa15.65■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Znf316Q6PGE4 1016 aa15.65■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Eid3Q3V124 375 aa15.65■□□□□ 0.1
Ssh1-201ENSMUST00000077689 Dnttip2Q8R2M2 758 aaKnown RBP15.64■□□□□ 0.09
Ssh1-201ENSMUST00000077689 LrpprcQ6PB66 1392 aaKnown RBP15.64■□□□□ 0.09
Ssh1-201ENSMUST00000077689 Slc4a3P16283 1227 aa15.63■□□□□ 0.09
Ssh1-201ENSMUST00000077689 Rpap1Q80TE0 1409 aa15.63■□□□□ 0.09
Ssh1-201ENSMUST00000077689 Iqcf3Q9D498 203 aa15.63■□□□□ 0.09
Ssh1-201ENSMUST00000077689 Fam50aQ9WV03 339 aaKnown RBP15.62■□□□□ 0.09
Ssh1-201ENSMUST00000077689 Thoc2B1AZI6 1594 aaKnown RBP15.6■□□□□ 0.09
Ssh1-201ENSMUST00000077689 Armcx1Q9CX83 456 aa15.59■□□□□ 0.09
Ssh1-201ENSMUST00000077689 Efcab5A0JP43 1406 aa15.59■□□□□ 0.09
Ssh1-201ENSMUST00000077689 Chrna2Q91X60 512 aa15.59■□□□□ 0.09
Ssh1-201ENSMUST00000077689 Gtf2a1Q99PM3 378 aa15.57■□□□□ 0.08
Ssh1-201ENSMUST00000077689 Carmil1Q6EDY6 1374 aa15.57■□□□□ 0.08
Ssh1-201ENSMUST00000077689 Naip1Q9QWK5 1403 aa15.57■□□□□ 0.08
Ssh1-201ENSMUST00000077689 Duox2A2AQ99 1517 aa15.56■□□□□ 0.08
Ssh1-201ENSMUST00000077689 Rbm10Q99KG3 930 aaKnown RBP15.56■□□□□ 0.08
Ssh1-201ENSMUST00000077689 PogzQ8BZH4 1409 aaKnown RBP15.55■□□□□ 0.08
Ssh1-201ENSMUST00000077689 Tiam1Q60610 1591 aa15.55■□□□□ 0.08
Ssh1-201ENSMUST00000077689 AqrQ8CFQ3 1481 aaKnown RBP15.54■□□□□ 0.08
Ssh1-201ENSMUST00000077689 TimelessQ9R1X4 1197 aa15.53■□□□□ 0.08
Ssh1-201ENSMUST00000077689 Ankrd26Q811D2 1581 aa15.53■□□□□ 0.08
Ssh1-201ENSMUST00000077689 Dhx29Q6PGC1 1365 aaKnown RBP15.51■□□□□ 0.07
Ssh1-201ENSMUST00000077689 P3h3Q8CG70 732 aa15.51■□□□□ 0.07
Ssh1-201ENSMUST00000077689 ChgaP26339 463 aaKnown RBP15.5■□□□□ 0.07
Ssh1-201ENSMUST00000077689 Vgll3P85442 326 aa15.48■□□□□ 0.07
Ssh1-201ENSMUST00000077689 Pcf11G3X9Z4 1553 aa15.48■□□□□ 0.07
Ssh1-201ENSMUST00000077689 CntlnA2AM05 1397 aa15.48■□□□□ 0.07
Ssh1-201ENSMUST00000077689 Fam135aQ6NS59 1506 aa15.48■□□□□ 0.07
Ssh1-201ENSMUST00000077689 Cux1P53564 1515 aa15.48■□□□□ 0.07
Ssh1-201ENSMUST00000077689 Rrp9Q91WM3 475 aaKnown RBP15.46■□□□□ 0.07
Ssh1-201ENSMUST00000077689 Aebp1Q640N1 1128 aa15.46■□□□□ 0.06
Ssh1-201ENSMUST00000077689 Erich3F6QRE9 1637 aa15.45■□□□□ 0.06
Ssh1-201ENSMUST00000077689 Rad54l2Q99NG0 1466 aa15.44■□□□□ 0.06
Ssh1-201ENSMUST00000077689 Slx4Q6P1D7 1565 aa15.44■□□□□ 0.06
Ssh1-201ENSMUST00000077689 AU015836B2RUM3 263 aa15.43■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms