RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Cwc22Q8C5N3 908 aaKnown RBP8.59□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Fgd1P52734 960 aa8.59□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Fkbp15Q6P9Q6 1216 aaKnown RBP8.59□□□□□ -1.03
Scn1a-201ENSMUST00000077489 Mia2Q91ZV0 1396 aa8.58□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Mrs2Q5NCE8 434 aa8.58□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Chmp4bQ9D8B3 224 aaKnown RBP8.58□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Ythdc1E9Q5K9 736 aaKnown RBP8.57□□□□□ -1.04
Scn1a-201ENSMUST00000077489 CatipB9EKE5 520 aa8.57□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Mapk8ip2Q9ERE9 830 aa8.57□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Chic2Q9D9G3 165 aa8.57□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Prdm10Q3UTQ7 1184 aa8.57□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Zfp777B9EKF4 885 aa8.56□□□□□ -1.04
Scn1a-201ENSMUST00000077489 IqubQ8CDK3 788 aa8.55□□□□□ -1.04
Scn1a-201ENSMUST00000077489 ArxO35085 564 aa8.55□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Rad21Q61550 635 aaKnown RBP8.55□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Hsp90ab1P11499 724 aaKnown RBP8.54□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Trim44Q9QXA7 346 aa8.54□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Kif15Q6P9L6 1387 aa8.54□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Mbd3Q9Z2D8 285 aaKnown RBP8.54□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Htatsf1Q8BGC0 757 aa8.53□□□□□ -1.04
Scn1a-201ENSMUST00000077489 Arid4bA2CG63 1314 aaKnown RBP8.52□□□□□ -1.05
Scn1a-201ENSMUST00000077489 DekQ7TNV0 380 aaKnown RBP8.51□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Safb2Q80YR5 991 aaKnown RBP8.51□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Mtus2Q3UHD3 1353 aa8.5□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Map7O88735 730 aa8.5□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Ofd1Q80Z25 1017 aa8.49□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Srpk2O54781 681 aaKnown RBP8.48□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Ppm1gQ61074 542 aa8.48□□□□□ -1.05
Scn1a-201ENSMUST00000077489 CanxP35564 591 aaKnown RBP8.48□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Card11Q8CIS0 1159 aa8.48□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Gm38655A0A286YDK6 273 aa8.47□□□□□ -1.05
Scn1a-201ENSMUST00000077489 NudcO35685 332 aaKnown RBP8.47□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Adam1bQ8R534 806 aa8.47□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Rgl3Q3UYI5 709 aa8.47□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Ccdc27Q3V036 639 aa8.46□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Mapk8ip3Q9ESN9 1337 aa8.46□□□□□ -1.05
Scn1a-201ENSMUST00000077489 PtmaP26350 111 aa8.46□□□□□ -1.05
Scn1a-201ENSMUST00000077489 Iqcf3Q9D498 203 aa8.46□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Trim30dE9PWL0 497 aa8.44□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Kdm5dQ62240 1548 aa8.44□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Fmn1Q05860 1466 aa8.44□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Gm20521D3Z5F7 333 aa8.42□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Mroh3A0A1D5RM54 893 aa8.42□□□□□ -1.06
Scn1a-201ENSMUST00000077489 PtmsQ9D0J8 101 aaKnown RBP8.41□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Pds5bQ4VA53 1446 aaKnown RBP8.41□□□□□ -1.06
Scn1a-201ENSMUST00000077489 P3h3Q8CG70 732 aa8.4□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Exosc9Q9JHI7 438 aaKnown RBP8.4□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Rangap1P46061 589 aaKnown RBP8.4□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Arhgap27A2AB59 869 aa8.4□□□□□ -1.06
Scn1a-201ENSMUST00000077489 KnstrnQ9D9Z1 312 aaKnown RBP8.4□□□□□ -1.06
Scn1a-201ENSMUST00000077489 Fhad1A6PWD2 1420 aa8.4□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Arhgap35Q91YM2 1499 aa8.39□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Znf326O88291 580 aa8.39□□□□□ -1.07
Scn1a-201ENSMUST00000077489 HnrnpuQ8VEK3 800 aaKnown RBP8.39□□□□□ -1.07
Scn1a-201ENSMUST00000077489 MccE9PWI3 1003 aa8.38□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Trim26Q99PN3 545 aa8.38□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Fyco1Q8VDC1 1437 aa8.38□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Plcb2A3KGF7 1181 aa8.37□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Dhx57Q6P5D3 1388 aaKnown RBP8.37□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Stag3O70576 1240 aa8.36□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Crybg2B7ZCC2 1516 aa8.36□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Pde3bQ61409 1100 aa8.35□□□□□ -1.07
Scn1a-201ENSMUST00000077489 PnnO35691 725 aaKnown RBP8.35□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Rrp7aQ9D1C9 280 aaKnown RBP8.35□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Vsig10D3YX43 558 aa8.35□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Casc1Q6TDU8 730 aa8.35□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Cep162Q6ZQ06 1403 aa8.34□□□□□ -1.07
Scn1a-201ENSMUST00000077489 CntlnA2AM05 1397 aa8.34□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Fam71e1A1L3C1 212 aa8.34□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Gm6268A2A3U9 297 aa8.34□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Rwdd1Q9CQK7 243 aa8.34□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Kif27Q7M6Z4 1394 aa8.34□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Kdm2aP59997 1161 aa8.34□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Grwd1Q810D6 446 aaKnown RBP8.34□□□□□ -1.07
Scn1a-201ENSMUST00000077489 Aebp2Q9Z248 504 aaKnown RBP8.34□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Eif4g2Q62448 906 aaKnown RBP8.33□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Lmod3E9QA62 571 aa8.33□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Gm973E9Q295 1059 aa8.33□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Bcl11aQ9QYE3 773 aa8.32□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Rock2P70336 1388 aa8.32□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Tcerg1Q8CGF7 1100 aaKnown RBP8.31□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Tmf1B9EKI3 1091 aa8.31□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Plppr3Q7TPB0 716 aa8.31□□□□□ -1.08
Scn1a-201ENSMUST00000077489 1700123L14RikQ3V2K7 440 aa8.3□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Neurod2Q62414 383 aa8.3□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Pes1Q9EQ61 584 aaKnown RBP8.3□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Rsph4aQ8BYM7 716 aa8.29□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Sart3Q9JLI8 962 aaKnown RBP8.29□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Baz1bQ9Z277 1479 aa8.29□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Calcoco2A2A6M5 331 aa8.28□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Hsp90b1P08113 802 aaKnown RBP8.28□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Stard8Q8K031 1019 aa8.28□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Stk24Q99KH8 431 aa8.28□□□□□ -1.08
Scn1a-201ENSMUST00000077489 EspnQ9ET47 871 aa8.28□□□□□ -1.08
Scn1a-201ENSMUST00000077489 Wwc2Q6NXJ0 1187 aa8.27□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Smarce1O54941 411 aaKnown RBP8.27□□□□□ -1.09
Scn1a-201ENSMUST00000077489 AampJ3QN89 436 aa8.27□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Map4P27546 1125 aaKnown RBP8.27□□□□□ -1.09
Scn1a-201ENSMUST00000077489 Irx3P81067 507 aa8.27□□□□□ -1.09
Scn1a-201ENSMUST00000077489 4933402E13RikQ9D4D2 429 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms