RNA–Protein interactions for RNA: ENSMUST00000071370.6

Pcdh17-201, Transcript of Protocadherin 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh17, Length 11,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17-201ENSMUST00000071370 Htatsf1Q8BGC0 757 aa10.04□□□□□ -0.8
Pcdh17-201ENSMUST00000071370 4933402E13RikQ9D4D2 429 aa10.03□□□□□ -0.8
Pcdh17-201ENSMUST00000071370 P3h3Q8CG70 732 aa10.02□□□□□ -0.81
Pcdh17-201ENSMUST00000071370 Fgd1P52734 960 aa10.01□□□□□ -0.81
Pcdh17-201ENSMUST00000071370 Clip1Q922J3 1391 aa10.01□□□□□ -0.81
Pcdh17-201ENSMUST00000071370 Mapk8ip2Q9ERE9 830 aa9.99□□□□□ -0.81
Pcdh17-201ENSMUST00000071370 Eea1Q8BL66 1411 aa9.99□□□□□ -0.81
Pcdh17-201ENSMUST00000071370 Ppp4r2Q0VGB7 417 aa9.98□□□□□ -0.81
Pcdh17-201ENSMUST00000071370 Mbd3Q9Z2D8 285 aaKnown RBP9.97□□□□□ -0.81
Pcdh17-201ENSMUST00000071370 Fam71e1A1L3C1 212 aa9.97□□□□□ -0.81
Pcdh17-201ENSMUST00000071370 DekQ7TNV0 380 aaKnown RBP9.96□□□□□ -0.81
Pcdh17-201ENSMUST00000071370 Ppm1gQ61074 542 aa9.96□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Trim44Q9QXA7 346 aa9.95□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 AU015836B2RUM3 263 aa9.95□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Adam1bQ8R534 806 aa9.94□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Rad21Q61550 635 aaKnown RBP9.94□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Irx6Q9ER75 438 aa9.93□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Vsig10D3YX43 558 aa9.93□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Lmod3E9QA62 571 aa9.93□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Golga3P55937 1487 aa9.92□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Ubl4bQ9CQ84 188 aa9.9□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Mia2Q91ZV0 1396 aa9.9□□□□□ -0.82
Pcdh17-201ENSMUST00000071370 Clstn2Q9ER65 966 aa9.9□□□□□ -0.83
Pcdh17-201ENSMUST00000071370 Eid3Q3V124 375 aa9.88□□□□□ -0.83
Pcdh17-201ENSMUST00000071370 Trim26Q99PN3 545 aa9.88□□□□□ -0.83
Pcdh17-201ENSMUST00000071370 NacadQ5SWP3 1504 aa9.88□□□□□ -0.83
Pcdh17-201ENSMUST00000071370 Arid4bA2CG63 1314 aaKnown RBP9.87□□□□□ -0.83
Pcdh17-201ENSMUST00000071370 Crybg2B7ZCC2 1516 aa9.86□□□□□ -0.83
Pcdh17-201ENSMUST00000071370 Cwc22Q8C5N3 908 aaKnown RBP9.85□□□□□ -0.83
Pcdh17-201ENSMUST00000071370 Tcerg1Q8CGF7 1100 aaKnown RBP9.85□□□□□ -0.83
Pcdh17-201ENSMUST00000071370 IqubQ8CDK3 788 aa9.84□□□□□ -0.83
Pcdh17-201ENSMUST00000071370 Rtn4Q99P72 1162 aaKnown RBP9.83□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 PtmsQ9D0J8 101 aaKnown RBP9.83□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 Clstn1Q9EPL2 979 aa9.83□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 PnnO35691 725 aaKnown RBP9.82□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 Chic2Q9D9G3 165 aa9.82□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 MyclP10166 368 aa9.82□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 CanxP35564 591 aaKnown RBP9.81□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 Chmp4bQ9D8B3 224 aaKnown RBP9.8□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 Ipo9Q91YE6 1041 aa9.79□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 Mrs2Q5NCE8 434 aa9.79□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 Exosc9Q9JHI7 438 aaKnown RBP9.78□□□□□ -0.84
Pcdh17-201ENSMUST00000071370 Tnnt2P50752 301 aa9.77□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Hsp90ab1P11499 724 aaKnown RBP9.76□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 PtmaP26350 111 aa9.75□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Pes1Q9EQ61 584 aaKnown RBP9.75□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 BlmO88700 1416 aa9.74□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Map7O88735 730 aa9.74□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 NgefQ8CHT1 710 aa9.74□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Mapk8ip3Q9ESN9 1337 aa9.73□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Ddrgk1Q80WW9 315 aa9.72□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 AampJ3QN89 436 aa9.72□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Kdm2aP59997 1161 aa9.72□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Gm38655A0A286YDK6 273 aa9.72□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Rrp12Q6P5B0 1295 aaKnown RBP9.72□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Gm6268A2A3U9 297 aa9.72□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Ccdc18Q640L5 1455 aa9.71□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Setd5Q5XJV7 1441 aa9.71□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Gtf3c3Q3TMP1 882 aa9.71□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Ofd1Q80Z25 1017 aa9.71□□□□□ -0.85
Pcdh17-201ENSMUST00000071370 Supt16hQ920B9 1047 aa9.71□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Iqcf3Q9D498 203 aa9.71□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Rgl3Q3UYI5 709 aa9.71□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Srpk2O54781 681 aaKnown RBP9.71□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Trim30dE9PWL0 497 aa9.7□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Aebp2Q9Z248 504 aaKnown RBP9.7□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Eif4g2Q62448 906 aaKnown RBP9.69□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Zfp777B9EKF4 885 aa9.68□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Fmn1Q05860 1466 aa9.68□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Smarca2Q6DIC0 1577 aa9.68□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Pdcl3Q8BVF2 240 aa9.67□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Dnai1Q8C0M8 701 aa9.67□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Ggt6Q6PDE7 497 aa9.67□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Rsf1E9PWW9 1441 aaKnown RBP9.67□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Map7d2A2AG50 781 aa9.67□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Gm20521D3Z5F7 333 aa9.67□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Calcoco2A2A6M5 331 aa9.66□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Fyco1Q8VDC1 1437 aa9.65□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Fhad1A6PWD2 1420 aa9.65□□□□□ -0.86
Pcdh17-201ENSMUST00000071370 Plcb2A3KGF7 1181 aa9.65□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Pknox2Q8BG99 474 aa9.65□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Rock2P70336 1388 aa9.64□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Sh3bp5Q9Z131 463 aa9.64□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Mroh3A0A1D5RM54 893 aa9.64□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 1700019A02RikA0A087WPV9 146 aa9.64□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Stag3O70576 1240 aa9.64□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Ankrd36D3Z4K0 1415 aa9.64□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Baz1bQ9Z277 1479 aa9.64□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Q8BT18 775 aa9.63□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Mre11Q61216 706 aa9.63□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 EspnQ9ET47 871 aa9.62□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Glipr1l2Q9CQ35 332 aa9.62□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 KnstrnQ9D9Z1 312 aaKnown RBP9.62□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Arhgap35Q91YM2 1499 aa9.61□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Isy1Q69ZQ2 285 aaKnown RBP9.61□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Arhgap27A2AB59 869 aa9.61□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 MsnP26041 577 aaKnown RBP9.61□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Grwd1Q810D6 446 aaKnown RBP9.6□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Rassf8Q8CJ96 419 aa9.6□□□□□ -0.87
Pcdh17-201ENSMUST00000071370 Casc1Q6TDU8 730 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 146.5 ms