RNA–Protein interactions for RNA: ENSMUST00000060896.4

Col6a6-201, Transcript of Collagen alpha-6(VI) chain, mousemouse

TSL 1 (best) BASIC

Gene Col6a6, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-201ENSMUST00000060896 Ccdc18Q640L5 1455 aa9.79□□□□□ -0.84
Col6a6-201ENSMUST00000060896 Unc13aQ4KUS2 1712 aa9.78□□□□□ -0.84
Col6a6-201ENSMUST00000060896 Stra8P70278 393 aa9.74□□□□□ -0.85
Col6a6-201ENSMUST00000060896 Cux2P70298 1426 aa9.74□□□□□ -0.85
Col6a6-201ENSMUST00000060896 NrdcQ8BHG1 1161 aa9.74□□□□□ -0.85
Col6a6-201ENSMUST00000060896 Amer1Q7TS75 1132 aa9.73□□□□□ -0.85
Col6a6-201ENSMUST00000060896 Hspa5P20029 655 aaKnown RBP9.73□□□□□ -0.85
Col6a6-201ENSMUST00000060896 Os9Q8K2C7 672 aa9.73□□□□□ -0.85
Col6a6-201ENSMUST00000060896 Arhgap27A2AB59 869 aa9.71□□□□□ -0.85
Col6a6-201ENSMUST00000060896 Anks4bQ8K3X6 423 aa9.71□□□□□ -0.86
Col6a6-201ENSMUST00000060896 Mrc2Q64449 1479 aa9.7□□□□□ -0.86
Col6a6-201ENSMUST00000060896 Prdm10Q3UTQ7 1184 aa9.7□□□□□ -0.86
Col6a6-201ENSMUST00000060896 1700123L14RikQ3V2K7 440 aa9.7□□□□□ -0.86
Col6a6-201ENSMUST00000060896 Erich6D3Z6S9 713 aa9.7□□□□□ -0.86
Col6a6-201ENSMUST00000060896 Aebp1Q640N1 1128 aa9.68□□□□□ -0.86
Col6a6-201ENSMUST00000060896 PtprkP35822 1457 aa9.65□□□□□ -0.86
Col6a6-201ENSMUST00000060896 Rgl3Q3UYI5 709 aa9.65□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Sin3aQ60520 1274 aaKnown RBP9.64□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Pelp1Q9DBD5 1123 aaKnown RBP9.63□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Top2bQ64511 1612 aa9.63□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Tnnt3Q9QZ47 272 aa9.62□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Ccer2J3QPU5 274 aa9.61□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Top2aQ01320 1528 aaKnown RBP9.61□□□□□ -0.87
Col6a6-201ENSMUST00000060896 LrpprcQ6PB66 1392 aaKnown RBP9.6□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Grwd1Q810D6 446 aaKnown RBP9.6□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Mrs2Q5NCE8 434 aa9.6□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Rpap1Q80TE0 1409 aa9.59□□□□□ -0.87
Col6a6-201ENSMUST00000060896 Cabp1Q9JLK7 227 aa9.58□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Dhx29Q6PGC1 1365 aaKnown RBP9.57□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Kif27Q7M6Z4 1394 aa9.57□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Arhgap35Q91YM2 1499 aa9.57□□□□□ -0.88
Col6a6-201ENSMUST00000060896 P3h3Q8CG70 732 aa9.56□□□□□ -0.88
Col6a6-201ENSMUST00000060896 SafbD3YXK2 937 aaKnown RBP9.56□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Plppr3Q7TPB0 716 aa9.55□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Anp32bQ9EST5 272 aaKnown RBP9.54□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Carmil1Q6EDY6 1374 aa9.54□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Rad54l2Q99NG0 1466 aa9.54□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Arap1Q4LDD4 1452 aa9.53□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Bcl11aQ9QYE3 773 aa9.53□□□□□ -0.88
Col6a6-201ENSMUST00000060896 Shroom4Q1W617 1475 aa9.51□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Lamc3Q9R0B6 1581 aa9.51□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Rrp7aQ9D1C9 280 aaKnown RBP9.51□□□□□ -0.89
Col6a6-201ENSMUST00000060896 CntlnA2AM05 1397 aa9.51□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Pkd2O35245 966 aa9.51□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Rad21Q61550 635 aaKnown RBP9.5□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Wwc2Q6NXJ0 1187 aa9.5□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Ccnb3Q810T2 1396 aa9.5□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Atp1b4Q99ME6 356 aa9.49□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Fyco1Q8VDC1 1437 aa9.49□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Ttbk1Q6PCN3 1308 aa9.49□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Mtus2Q3UHD3 1353 aa9.48□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Mphosph9A6H5Y1 991 aa9.48□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Mia2Q91ZV0 1396 aa9.47□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Trak1Q6PD31 939 aa9.47□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Kdm2aP59997 1161 aa9.47□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Calr4Q3TQS0 420 aa9.47□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Naip1Q9QWK5 1403 aa9.46□□□□□ -0.89
Col6a6-201ENSMUST00000060896 AknaQ80VW7 1404 aa9.46□□□□□ -0.89
Col6a6-201ENSMUST00000060896 Zfp644E9QA22 1323 aa9.46□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Duox2A2AQ99 1517 aa9.45□□□□□ -0.9
Col6a6-201ENSMUST00000060896 TnnQ80Z71 1560 aa9.45□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Grin2bQ01097 1482 aa9.45□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Arid3cA6PWV5 409 aa9.44□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Aplp2Q06335 707 aa9.44□□□□□ -0.9
Col6a6-201ENSMUST00000060896 WrnO09053 1401 aa9.43□□□□□ -0.9
Col6a6-201ENSMUST00000060896 AqrQ8CFQ3 1481 aaKnown RBP9.43□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Ppp4r2Q0VGB7 417 aa9.43□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Gm13697A2AK42 830 aa9.43□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Card11Q8CIS0 1159 aa9.43□□□□□ -0.9
Col6a6-201ENSMUST00000060896 NeflP08551 543 aa9.42□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Ncapd3Q6ZQK0 1506 aa9.42□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Efcab5A0JP43 1406 aa9.42□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Rangap1P46061 589 aaKnown RBP9.42□□□□□ -0.9
Col6a6-201ENSMUST00000060896 NrkQ9R0G8 1455 aa9.41□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Map4P27546 1125 aaKnown RBP9.41□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Mroh2bQ7M6Y6 1581 aa9.41□□□□□ -0.9
Col6a6-201ENSMUST00000060896 Camsap1A2AHC3 1581 aa9.39□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Rundc1Q0VDN7 615 aa9.39□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Polr3glQ8R0C0 218 aa9.39□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Nlrp6Q91WS2 869 aa9.39□□□□□ -0.91
Col6a6-201ENSMUST00000060896 PogzQ8BZH4 1409 aaKnown RBP9.39□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Anp32aO35381 247 aa9.39□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Mroh3A0A1D5RM54 893 aa9.38□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Arhgef5E9Q7D5 1581 aa9.38□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Stk24Q99KH8 431 aa9.37□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Ecm2Q5FW85 670 aa9.37□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Exoc6Q8R313 802 aa9.37□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Clstn2Q9ER65 966 aa9.36□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Ift140E9PY46 1464 aa9.36□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Fam71e1A1L3C1 212 aa9.35□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Urb2E9Q7L1 1524 aaKnown RBP9.35□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Ofd1Q80Z25 1017 aa9.35□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Tdrd9Q14BI7 1383 aa9.35□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Slc4a3P16283 1227 aa9.34□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Eif4g1Q6NZJ6 1600 aaKnown RBP9.34□□□□□ -0.91
Col6a6-201ENSMUST00000060896 Usp47Q8BY87 1376 aa9.33□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Ifit1bl1D3Z6F0 470 aa9.33□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Cnga1P29974 684 aa9.33□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Cux1P53564 1515 aa9.33□□□□□ -0.92
Col6a6-201ENSMUST00000060896 Sart1Q9Z315 806 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 101.2 ms