RNA–Protein interactions for RNA: ENSMUST00000051442.6

Pcdhb16-201, Transcript of MCG141291, mousemouse

APPRIS P1 BASIC

Gene Pcdhb16, Length 5,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb16-201ENSMUST00000051442 Polr3glQ8R0C0 218 aa16.45■□□□□ 0.22
Pcdhb16-201ENSMUST00000051442 Crybg2B7ZCC2 1516 aa16.45■□□□□ 0.22
Pcdhb16-201ENSMUST00000051442 Ccdc88bQ4QRL3 1481 aa16.44■□□□□ 0.22
Pcdhb16-201ENSMUST00000051442 Anks4bQ8K3X6 423 aa16.42■□□□□ 0.22
Pcdhb16-201ENSMUST00000051442 Fmn1Q05860 1466 aa16.42■□□□□ 0.22
Pcdhb16-201ENSMUST00000051442 Gm38655A0A286YDK6 273 aa16.41■□□□□ 0.22
Pcdhb16-201ENSMUST00000051442 Aplp2Q06335 707 aa16.39■□□□□ 0.21
Pcdhb16-201ENSMUST00000051442 Rgl3Q3UYI5 709 aa16.39■□□□□ 0.21
Pcdhb16-201ENSMUST00000051442 Mrs2Q5NCE8 434 aa16.38■□□□□ 0.21
Pcdhb16-201ENSMUST00000051442 Bcl11aQ9QYE3 773 aa16.34■□□□□ 0.21
Pcdhb16-201ENSMUST00000051442 Cep162Q6ZQ06 1403 aa16.33■□□□□ 0.21
Pcdhb16-201ENSMUST00000051442 CftrP26361 1476 aa16.33■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 Safb2Q80YR5 991 aaKnown RBP16.32■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 Cecr2E9Q2Z1 1453 aa16.3■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 Aebp2Q9Z248 504 aaKnown RBP16.3■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 ScribQ80U72 1612 aa16.3■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 Upf2A2AT37 1269 aaKnown RBP16.3■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 1700123L14RikQ3V2K7 440 aa16.29■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 Mtus2Q3UHD3 1353 aa16.29■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 Rad21Q61550 635 aaKnown RBP16.29■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 Calr4Q3TQS0 420 aa16.27■□□□□ 0.2
Pcdhb16-201ENSMUST00000051442 Mia2Q91ZV0 1396 aa16.26■□□□□ 0.19
Pcdhb16-201ENSMUST00000051442 Smarca2Q6DIC0 1577 aa16.26■□□□□ 0.19
Pcdhb16-201ENSMUST00000051442 Rrp7aQ9D1C9 280 aaKnown RBP16.25■□□□□ 0.19
Pcdhb16-201ENSMUST00000051442 P3h3Q8CG70 732 aa16.24■□□□□ 0.19
Pcdhb16-201ENSMUST00000051442 Grwd1Q810D6 446 aaKnown RBP16.24■□□□□ 0.19
Pcdhb16-201ENSMUST00000051442 Kif27Q7M6Z4 1394 aa16.22■□□□□ 0.19
Pcdhb16-201ENSMUST00000051442 Mroh3A0A1D5RM54 893 aa16.21■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Kdm2aP59997 1161 aa16.2■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Cux2P70298 1426 aa16.2■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Atad2bE9Q166 1460 aaKnown RBP16.19■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Aebp1Q640N1 1128 aa16.19■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Synj1Q8CHC4 1574 aa16.18■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Card11Q8CIS0 1159 aa16.18■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Rangap1P46061 589 aaKnown RBP16.17■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Ppp4r2Q0VGB7 417 aa16.17■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Srpk2O54781 681 aaKnown RBP16.16■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Phldb1Q6PDH0 1371 aaKnown RBP16.16■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 Cwc22Q8C5N3 908 aaKnown RBP16.15■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 IqubQ8CDK3 788 aa16.15■□□□□ 0.18
Pcdhb16-201ENSMUST00000051442 DaxxO35613 739 aa16.13■□□□□ 0.17
Pcdhb16-201ENSMUST00000051442 Baz1bQ9Z277 1479 aa16.13■□□□□ 0.17
Pcdhb16-201ENSMUST00000051442 Smarca4Q3TKT4 1613 aaKnown RBP16.12■□□□□ 0.17
Pcdhb16-201ENSMUST00000051442 Gm20521D3Z5F7 333 aa16.12■□□□□ 0.17
Pcdhb16-201ENSMUST00000051442 Rpap1Q80TE0 1409 aa16.11■□□□□ 0.17
Pcdhb16-201ENSMUST00000051442 ArxO35085 564 aa16.1■□□□□ 0.17
Pcdhb16-201ENSMUST00000051442 Hspa5P20029 655 aaKnown RBP16.09■□□□□ 0.17
Pcdhb16-201ENSMUST00000051442 Wdr43Q6ZQL4 677 aaKnown RBP16.09■□□□□ 0.17
Pcdhb16-201ENSMUST00000051442 Fyco1Q8VDC1 1437 aa16.08■□□□□ 0.17
Pcdhb16-201ENSMUST00000051442 CntlnA2AM05 1397 aa16.08■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 Stk24Q99KH8 431 aa16.06■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 AknaQ80VW7 1404 aa16.06■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 Ofd1Q80Z25 1017 aa16.05■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 Map4P27546 1125 aaKnown RBP16.04■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 Rapgef2Q8CHG7 1496 aa16.03■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 Exosc9Q9JHI7 438 aaKnown RBP16.03■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 Carmil1Q6EDY6 1374 aa16.02■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 Cttnbp2B9EJA2 1648 aa16.02■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 Pkd2O35245 966 aa16.02■□□□□ 0.16
Pcdhb16-201ENSMUST00000051442 Trim26Q99PN3 545 aa16.01■□□□□ 0.15
Pcdhb16-201ENSMUST00000051442 Arhgap35Q91YM2 1499 aa16■□□□□ 0.15
Pcdhb16-201ENSMUST00000051442 Cabp1Q9JLK7 227 aa15.99■□□□□ 0.15
Pcdhb16-201ENSMUST00000051442 Stag3O70576 1240 aa15.97■□□□□ 0.15
Pcdhb16-201ENSMUST00000051442 LrpprcQ6PB66 1392 aaKnown RBP15.96■□□□□ 0.15
Pcdhb16-201ENSMUST00000051442 Arid3cA6PWV5 409 aa15.96■□□□□ 0.15
Pcdhb16-201ENSMUST00000051442 Fgd1P52734 960 aa15.96■□□□□ 0.15
Pcdhb16-201ENSMUST00000051442 Mphosph9A6H5Y1 991 aa15.94■□□□□ 0.14
Pcdhb16-201ENSMUST00000051442 Fam71e1A1L3C1 212 aa15.93■□□□□ 0.14
Pcdhb16-201ENSMUST00000051442 Ppp1r18Q8BQ30 594 aa15.93■□□□□ 0.14
Pcdhb16-201ENSMUST00000051442 Dhx57Q6P5D3 1388 aaKnown RBP15.93■□□□□ 0.14
Pcdhb16-201ENSMUST00000051442 Trak1Q6PD31 939 aa15.92■□□□□ 0.14
Pcdhb16-201ENSMUST00000051442 Iqgap2Q3UQ44 1575 aa15.91■□□□□ 0.14
Pcdhb16-201ENSMUST00000051442 Rundc1Q0VDN7 615 aa15.91■□□□□ 0.14
Pcdhb16-201ENSMUST00000051442 Lemd3Q9WU40 921 aa15.9■□□□□ 0.14
Pcdhb16-201ENSMUST00000051442 Dhx29Q6PGC1 1365 aaKnown RBP15.88■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 Mapk8ip3Q9ESN9 1337 aa15.88■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 Neurod2Q62414 383 aa15.87■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 MyclP10166 368 aa15.86■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 Ifit1bl1D3Z6F0 470 aa15.85■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 Cnga1P29974 684 aa15.85■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 Wwc2Q6NXJ0 1187 aa15.84■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 Apbb1Q9QXJ1 710 aa15.83■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 Plekhh2Q8C115 1491 aa15.83■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 Ccnb3Q810T2 1396 aa15.83■□□□□ 0.13
Pcdhb16-201ENSMUST00000051442 NgefQ8CHT1 710 aa15.83■□□□□ 0.12
Pcdhb16-201ENSMUST00000051442 Sin3aQ60520 1274 aaKnown RBP15.82■□□□□ 0.12
Pcdhb16-201ENSMUST00000051442 Irx6Q9ER75 438 aa15.82■□□□□ 0.12
Pcdhb16-201ENSMUST00000051442 Ccdc9Q8VC31 543 aaKnown RBP15.81■□□□□ 0.12
Pcdhb16-201ENSMUST00000051442 Nup155Q99P88 1391 aaKnown RBP15.81■□□□□ 0.12
Pcdhb16-201ENSMUST00000051442 Fhad1A6PWD2 1420 aa15.81■□□□□ 0.12
Pcdhb16-201ENSMUST00000051442 Trim30dE9PWL0 497 aa15.8■□□□□ 0.12
Pcdhb16-201ENSMUST00000051442 Gtf2e1Q9D0D5 440 aa15.8■□□□□ 0.12
Pcdhb16-201ENSMUST00000051442 Ythdc1E9Q5K9 736 aaKnown RBP15.78■□□□□ 0.12
Pcdhb16-201ENSMUST00000051442 Iqcf3Q9D498 203 aa15.76■□□□□ 0.11
Pcdhb16-201ENSMUST00000051442 Hsp90ab1P11499 724 aaKnown RBP15.76■□□□□ 0.11
Pcdhb16-201ENSMUST00000051442 Kif3bQ61771 747 aa15.76■□□□□ 0.11
Pcdhb16-201ENSMUST00000051442 Zfp777B9EKF4 885 aa15.75■□□□□ 0.11
Pcdhb16-201ENSMUST00000051442 UacaQ8CGB3 1411 aa15.75■□□□□ 0.11
Pcdhb16-201ENSMUST00000051442 Sart1Q9Z315 806 aaKnown RBP15.75■□□□□ 0.11
Pcdhb16-201ENSMUST00000051442 Tmf1B9EKI3 1091 aa15.74■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms