RNA–Protein interactions for RNA: ENSMUST00000044053.12

Shprh-201, Transcript of E3 ubiquitin-protein ligase SHPRH, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Shprh, Length 9,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shprh-201ENSMUST00000044053 Clip1Q922J3 1391 aa8.23□□□□□ -1.09
Shprh-201ENSMUST00000044053 Gtf3c3Q3TMP1 882 aa8.22□□□□□ -1.09
Shprh-201ENSMUST00000044053 Rad21Q61550 635 aaKnown RBP8.21□□□□□ -1.1
Shprh-201ENSMUST00000044053 Upf2A2AT37 1269 aaKnown RBP8.21□□□□□ -1.1
Shprh-201ENSMUST00000044053 Nlrp6Q91WS2 869 aa8.2□□□□□ -1.1
Shprh-201ENSMUST00000044053 Slc4a3P16283 1227 aa8.19□□□□□ -1.1
Shprh-201ENSMUST00000044053 Spryd3E9Q9B3 442 aa8.19□□□□□ -1.1
Shprh-201ENSMUST00000044053 Cep164Q5DU05 1446 aa8.19□□□□□ -1.1
Shprh-201ENSMUST00000044053 Npm1Q61937 292 aaKnown RBP8.19□□□□□ -1.1
Shprh-201ENSMUST00000044053 Fkbp15Q6P9Q6 1216 aaKnown RBP8.19□□□□□ -1.1
Shprh-201ENSMUST00000044053 Atp1b4Q99ME6 356 aa8.19□□□□□ -1.1
Shprh-201ENSMUST00000044053 DekQ7TNV0 380 aaKnown RBP8.18□□□□□ -1.1
Shprh-201ENSMUST00000044053 Plcd4Q8K3R3 807 aa8.18□□□□□ -1.1
Shprh-201ENSMUST00000044053 Trim26Q99PN3 545 aa8.18□□□□□ -1.1
Shprh-201ENSMUST00000044053 Chic2Q9D9G3 165 aa8.18□□□□□ -1.1
Shprh-201ENSMUST00000044053 NacadQ5SWP3 1504 aa8.18□□□□□ -1.1
Shprh-201ENSMUST00000044053 CanxP35564 591 aaKnown RBP8.17□□□□□ -1.1
Shprh-201ENSMUST00000044053 Crybg2B7ZCC2 1516 aa8.16□□□□□ -1.1
Shprh-201ENSMUST00000044053 IbspQ61711 324 aa8.15□□□□□ -1.1
Shprh-201ENSMUST00000044053 Trim44Q9QXA7 346 aa8.15□□□□□ -1.1
Shprh-201ENSMUST00000044053 Arid4bA2CG63 1314 aaKnown RBP8.14□□□□□ -1.11
Shprh-201ENSMUST00000044053 Plppr3Q7TPB0 716 aa8.13□□□□□ -1.11
Shprh-201ENSMUST00000044053 Baz1aO88379 1555 aa8.13□□□□□ -1.11
Shprh-201ENSMUST00000044053 Mrs2Q5NCE8 434 aa8.12□□□□□ -1.11
Shprh-201ENSMUST00000044053 Supt16hQ920B9 1047 aa8.11□□□□□ -1.11
Shprh-201ENSMUST00000044053 Brd4Q9ESU6 1400 aaKnown RBP8.1□□□□□ -1.11
Shprh-201ENSMUST00000044053 Nolc1E9Q5C9 702 aaKnown RBP8.1□□□□□ -1.11
Shprh-201ENSMUST00000044053 Znf316Q6PGE4 1016 aa8.1□□□□□ -1.11
Shprh-201ENSMUST00000044053 BlmO88700 1416 aa8.1□□□□□ -1.11
Shprh-201ENSMUST00000044053 Gm13697A2AK42 830 aa8.1□□□□□ -1.11
Shprh-201ENSMUST00000044053 Tnnt2P50752 301 aa8.09□□□□□ -1.11
Shprh-201ENSMUST00000044053 Hsp90ab1P11499 724 aaKnown RBP8.07□□□□□ -1.12
Shprh-201ENSMUST00000044053 Dnttip2Q8R2M2 758 aaKnown RBP8.06□□□□□ -1.12
Shprh-201ENSMUST00000044053 Trim30dE9PWL0 497 aa8.05□□□□□ -1.12
Shprh-201ENSMUST00000044053 Dbr1Q923B1 550 aa8.04□□□□□ -1.12
Shprh-201ENSMUST00000044053 Apbb1Q9QXJ1 710 aa8.03□□□□□ -1.12
Shprh-201ENSMUST00000044053 AU015836B2RUM3 263 aa8.03□□□□□ -1.12
Shprh-201ENSMUST00000044053 B4galnt3Q6L8S8 986 aa8.02□□□□□ -1.12
Shprh-201ENSMUST00000044053 Rgl3Q3UYI5 709 aa8.02□□□□□ -1.13
Shprh-201ENSMUST00000044053 Gm13695A2AK44 830 aa8.01□□□□□ -1.13
Shprh-201ENSMUST00000044053 PtmaP26350 111 aa8.01□□□□□ -1.13
Shprh-201ENSMUST00000044053 Plcb2A3KGF7 1181 aa8□□□□□ -1.13
Shprh-201ENSMUST00000044053 Ipo9Q91YE6 1041 aa8□□□□□ -1.13
Shprh-201ENSMUST00000044053 ChgaP26339 463 aaKnown RBP7.99□□□□□ -1.13
Shprh-201ENSMUST00000044053 Grwd1Q810D6 446 aaKnown RBP7.99□□□□□ -1.13
Shprh-201ENSMUST00000044053 Podxl2Q8CAE9 603 aa7.98□□□□□ -1.13
Shprh-201ENSMUST00000044053 Ecm2Q5FW85 670 aa7.97□□□□□ -1.13
Shprh-201ENSMUST00000044053 Ofd1Q80Z25 1017 aa7.97□□□□□ -1.13
Shprh-201ENSMUST00000044053 Setd5Q5XJV7 1441 aa7.97□□□□□ -1.13
Shprh-201ENSMUST00000044053 Erich6bQ9D4S6 220 aa7.97□□□□□ -1.13
Shprh-201ENSMUST00000044053 Rsf1E9PWW9 1441 aaKnown RBP7.95□□□□□ -1.14
Shprh-201ENSMUST00000044053 Irx6Q9ER75 438 aa7.95□□□□□ -1.14
Shprh-201ENSMUST00000044053 Armcx1Q9CX83 456 aa7.95□□□□□ -1.14
Shprh-201ENSMUST00000044053 Kdm5dQ62240 1548 aa7.94□□□□□ -1.14
Shprh-201ENSMUST00000044053 Kdm2aP59997 1161 aa7.94□□□□□ -1.14
Shprh-201ENSMUST00000044053 Htatsf1Q8BGC0 757 aa7.94□□□□□ -1.14
Shprh-201ENSMUST00000044053 Znf692Q3U381 531 aa7.93□□□□□ -1.14
Shprh-201ENSMUST00000044053 Ubl4bQ9CQ84 188 aa7.93□□□□□ -1.14
Shprh-201ENSMUST00000044053 Neurod2Q62414 383 aa7.93□□□□□ -1.14
Shprh-201ENSMUST00000044053 Wwc2Q6NXJ0 1187 aa7.92□□□□□ -1.14
Shprh-201ENSMUST00000044053 Znf326O88291 580 aa7.92□□□□□ -1.14
Shprh-201ENSMUST00000044053 Ccer2J3QPU5 274 aa7.9□□□□□ -1.14
Shprh-201ENSMUST00000044053 Adam1bQ8R534 806 aa7.9□□□□□ -1.15
Shprh-201ENSMUST00000044053 Hspa5P20029 655 aaKnown RBP7.9□□□□□ -1.15
Shprh-201ENSMUST00000044053 TimelessQ9R1X4 1197 aa7.89□□□□□ -1.15
Shprh-201ENSMUST00000044053 ScribQ80U72 1612 aa7.88□□□□□ -1.15
Shprh-201ENSMUST00000044053 Ppm1gQ61074 542 aa7.87□□□□□ -1.15
Shprh-201ENSMUST00000044053 Ipo4Q8VI75 1082 aa7.87□□□□□ -1.15
Shprh-201ENSMUST00000044053 Tcerg1Q8CGF7 1100 aaKnown RBP7.87□□□□□ -1.15
Shprh-201ENSMUST00000044053 Fgd1P52734 960 aa7.87□□□□□ -1.15
Shprh-201ENSMUST00000044053 Dnai1Q8C0M8 701 aa7.86□□□□□ -1.15
Shprh-201ENSMUST00000044053 Rrp12Q6P5B0 1295 aaKnown RBP7.86□□□□□ -1.15
Shprh-201ENSMUST00000044053 Sin3aQ60520 1274 aaKnown RBP7.86□□□□□ -1.15
Shprh-201ENSMUST00000044053 Fbxo2Q80UW2 297 aa7.86□□□□□ -1.15
Shprh-201ENSMUST00000044053 Golga3P55937 1487 aa7.85□□□□□ -1.15
Shprh-201ENSMUST00000044053 Pak3Q61036 559 aa7.85□□□□□ -1.15
Shprh-201ENSMUST00000044053 Pdcl3Q8BVF2 240 aa7.85□□□□□ -1.15
Shprh-201ENSMUST00000044053 Eea1Q8BL66 1411 aa7.85□□□□□ -1.15
Shprh-201ENSMUST00000044053 Card11Q8CIS0 1159 aa7.84□□□□□ -1.15
Shprh-201ENSMUST00000044053 SlkO54988 1233 aa7.84□□□□□ -1.16
Shprh-201ENSMUST00000044053 Hmgb3O54879 200 aaKnown RBP7.83□□□□□ -1.16
Shprh-201ENSMUST00000044053 Senp3Q9EP97 568 aaKnown RBP7.83□□□□□ -1.16
Shprh-201ENSMUST00000044053 Sycp2Q9CUU3 1500 aa7.83□□□□□ -1.16
Shprh-201ENSMUST00000044053 Smarca2Q6DIC0 1577 aa7.83□□□□□ -1.16
Shprh-201ENSMUST00000044053 Cnga1P29974 684 aa7.83□□□□□ -1.16
Shprh-201ENSMUST00000044053 Ccdc88bQ4QRL3 1481 aa7.83□□□□□ -1.16
Shprh-201ENSMUST00000044053 MsnP26041 577 aaKnown RBP7.82□□□□□ -1.16
Shprh-201ENSMUST00000044053 Plagl1Q9JLQ4 704 aa7.82□□□□□ -1.16
Shprh-201ENSMUST00000044053 Ubap1lG3UW59 384 aa7.82□□□□□ -1.16
Shprh-201ENSMUST00000044053 Gpatch11Q3UFS4 262 aa7.82□□□□□ -1.16
Shprh-201ENSMUST00000044053 1700019A02RikA0A087WPV9 146 aa7.82□□□□□ -1.16
Shprh-201ENSMUST00000044053 Gm6268A2A3U9 297 aa7.81□□□□□ -1.16
Shprh-201ENSMUST00000044053 Pes1Q9EQ61 584 aaKnown RBP7.81□□□□□ -1.16
Shprh-201ENSMUST00000044053 CalrP14211 416 aaKnown RBP7.81□□□□□ -1.16
Shprh-201ENSMUST00000044053 SetQ9EQU5 289 aaKnown RBP7.81□□□□□ -1.16
Shprh-201ENSMUST00000044053 Cc2d2aQ8CFW7 1633 aa7.81□□□□□ -1.16
Shprh-201ENSMUST00000044053 Samd1D3YXK1 519 aa7.81□□□□□ -1.16
Shprh-201ENSMUST00000044053 Kif15Q6P9L6 1387 aa7.8□□□□□ -1.16
Shprh-201ENSMUST00000044053 Mroh3A0A1D5RM54 893 aa7.8□□□□□ -1.16
Shprh-201ENSMUST00000044053 Plin1Q8CGN5 517 aa7.79□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms