RNA–Protein interactions for RNA: ENSMUST00000035340.13

Usp54-202, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-202ENSMUST00000035340 Anp32aO35381 247 aa10.34□□□□□ -0.75
Usp54-202ENSMUST00000035340 Eid3Q3V124 375 aa10.34□□□□□ -0.75
Usp54-202ENSMUST00000035340 Srpk2O54781 681 aaKnown RBP10.34□□□□□ -0.75
Usp54-202ENSMUST00000035340 Rsph4aQ8BYM7 716 aa10.33□□□□□ -0.76
Usp54-202ENSMUST00000035340 Supt5hO55201 1082 aaKnown RBP10.32□□□□□ -0.76
Usp54-202ENSMUST00000035340 Mia2Q91ZV0 1396 aa10.29□□□□□ -0.76
Usp54-202ENSMUST00000035340 Fgd1P52734 960 aa10.28□□□□□ -0.76
Usp54-202ENSMUST00000035340 Cwc22Q8C5N3 908 aaKnown RBP10.28□□□□□ -0.76
Usp54-202ENSMUST00000035340 Ppp1r18Q8BQ30 594 aa10.28□□□□□ -0.76
Usp54-202ENSMUST00000035340 Mroh3A0A1D5RM54 893 aa10.28□□□□□ -0.76
Usp54-202ENSMUST00000035340 MyclP10166 368 aa10.26□□□□□ -0.77
Usp54-202ENSMUST00000035340 Rrp7aQ9D1C9 280 aaKnown RBP10.26□□□□□ -0.77
Usp54-202ENSMUST00000035340 Iqcf3Q9D498 203 aa10.25□□□□□ -0.77
Usp54-202ENSMUST00000035340 Exosc9Q9JHI7 438 aaKnown RBP10.25□□□□□ -0.77
Usp54-202ENSMUST00000035340 Dhx57Q6P5D3 1388 aaKnown RBP10.25□□□□□ -0.77
Usp54-202ENSMUST00000035340 Gm20521D3Z5F7 333 aa10.25□□□□□ -0.77
Usp54-202ENSMUST00000035340 Phldb1Q6PDH0 1371 aaKnown RBP10.24□□□□□ -0.77
Usp54-202ENSMUST00000035340 Fmn1Q05860 1466 aa10.24□□□□□ -0.77
Usp54-202ENSMUST00000035340 Rgl3Q3UYI5 709 aa10.24□□□□□ -0.77
Usp54-202ENSMUST00000035340 Chmp4bQ9D8B3 224 aaKnown RBP10.24□□□□□ -0.77
Usp54-202ENSMUST00000035340 Crybg2B7ZCC2 1516 aa10.23□□□□□ -0.77
Usp54-202ENSMUST00000035340 Sycp2Q9CUU3 1500 aa10.23□□□□□ -0.77
Usp54-202ENSMUST00000035340 Hsp90aa1P07901 733 aaKnown RBP10.23□□□□□ -0.77
Usp54-202ENSMUST00000035340 Kif27Q7M6Z4 1394 aa10.22□□□□□ -0.77
Usp54-202ENSMUST00000035340 Arid4bA2CG63 1314 aaKnown RBP10.2□□□□□ -0.78
Usp54-202ENSMUST00000035340 Eif4g2Q62448 906 aaKnown RBP10.19□□□□□ -0.78
Usp54-202ENSMUST00000035340 Mapk8ip3Q9ESN9 1337 aa10.19□□□□□ -0.78
Usp54-202ENSMUST00000035340 Lemd3Q9WU40 921 aa10.18□□□□□ -0.78
Usp54-202ENSMUST00000035340 Mrs2Q5NCE8 434 aa10.18□□□□□ -0.78
Usp54-202ENSMUST00000035340 AknaQ80VW7 1404 aa10.18□□□□□ -0.78
Usp54-202ENSMUST00000035340 Card11Q8CIS0 1159 aa10.18□□□□□ -0.78
Usp54-202ENSMUST00000035340 Stag3O70576 1240 aa10.17□□□□□ -0.78
Usp54-202ENSMUST00000035340 Kdm2aP59997 1161 aa10.17□□□□□ -0.78
Usp54-202ENSMUST00000035340 Atad2bE9Q166 1460 aaKnown RBP10.17□□□□□ -0.78
Usp54-202ENSMUST00000035340 NudcO35685 332 aaKnown RBP10.16□□□□□ -0.78
Usp54-202ENSMUST00000035340 Cux2P70298 1426 aa10.15□□□□□ -0.78
Usp54-202ENSMUST00000035340 Rad21Q61550 635 aaKnown RBP10.15□□□□□ -0.78
Usp54-202ENSMUST00000035340 Znf326O88291 580 aa10.14□□□□□ -0.79
Usp54-202ENSMUST00000035340 HdgfP51859 237 aaKnown RBP10.14□□□□□ -0.79
Usp54-202ENSMUST00000035340 Stk24Q99KH8 431 aa10.14□□□□□ -0.79
Usp54-202ENSMUST00000035340 DaxxO35613 739 aa10.13□□□□□ -0.79
Usp54-202ENSMUST00000035340 Mapk8ip2Q9ERE9 830 aa10.12□□□□□ -0.79
Usp54-202ENSMUST00000035340 Fyco1Q8VDC1 1437 aa10.11□□□□□ -0.79
Usp54-202ENSMUST00000035340 CntlnA2AM05 1397 aa10.1□□□□□ -0.79
Usp54-202ENSMUST00000035340 Map4P27546 1125 aaKnown RBP10.1□□□□□ -0.79
Usp54-202ENSMUST00000035340 Rpap1Q80TE0 1409 aa10.1□□□□□ -0.79
Usp54-202ENSMUST00000035340 Grwd1Q810D6 446 aaKnown RBP10.09□□□□□ -0.79
Usp54-202ENSMUST00000035340 Calr4Q3TQS0 420 aa10.09□□□□□ -0.79
Usp54-202ENSMUST00000035340 Carmil1Q6EDY6 1374 aa10.08□□□□□ -0.8
Usp54-202ENSMUST00000035340 Aebp1Q640N1 1128 aa10.08□□□□□ -0.8
Usp54-202ENSMUST00000035340 Fhad1A6PWD2 1420 aa10.07□□□□□ -0.8
Usp54-202ENSMUST00000035340 Rangap1P46061 589 aaKnown RBP10.07□□□□□ -0.8
Usp54-202ENSMUST00000035340 Baz1bQ9Z277 1479 aa10.06□□□□□ -0.8
Usp54-202ENSMUST00000035340 Stard8Q8K031 1019 aa10.06□□□□□ -0.8
Usp54-202ENSMUST00000035340 Arid3cA6PWV5 409 aa10.06□□□□□ -0.8
Usp54-202ENSMUST00000035340 NgefQ8CHT1 710 aa10.05□□□□□ -0.8
Usp54-202ENSMUST00000035340 Cep162Q6ZQ06 1403 aa10.05□□□□□ -0.8
Usp54-202ENSMUST00000035340 Gm6268A2A3U9 297 aa10.05□□□□□ -0.8
Usp54-202ENSMUST00000035340 Pabpn1Q8CCS6 302 aaKnown RBP10.05□□□□□ -0.8
Usp54-202ENSMUST00000035340 Aplp2Q06335 707 aa10.04□□□□□ -0.8
Usp54-202ENSMUST00000035340 CftrP26361 1476 aa10.04□□□□□ -0.8
Usp54-202ENSMUST00000035340 Ggt6Q6PDE7 497 aa10.04□□□□□ -0.8
Usp54-202ENSMUST00000035340 Psme1P97371 249 aa10.04□□□□□ -0.8
Usp54-202ENSMUST00000035340 Sall2Q9QX96 1004 aa10.03□□□□□ -0.8
Usp54-202ENSMUST00000035340 WrnO09053 1401 aa10.03□□□□□ -0.8
Usp54-202ENSMUST00000035340 Gtf2e1Q9D0D5 440 aa10.02□□□□□ -0.8
Usp54-202ENSMUST00000035340 Arhgap35Q91YM2 1499 aa10.02□□□□□ -0.81
Usp54-202ENSMUST00000035340 Wdr43Q6ZQL4 677 aaKnown RBP10.02□□□□□ -0.81
Usp54-202ENSMUST00000035340 Map7O88735 730 aa10.01□□□□□ -0.81
Usp54-202ENSMUST00000035340 Csrnp3P59055 597 aa10.01□□□□□ -0.81
Usp54-202ENSMUST00000035340 Pde3bQ61409 1100 aa10.01□□□□□ -0.81
Usp54-202ENSMUST00000035340 Anks4bQ8K3X6 423 aa10.01□□□□□ -0.81
Usp54-202ENSMUST00000035340 MlecQ6ZQI3 291 aaKnown RBP10.01□□□□□ -0.81
Usp54-202ENSMUST00000035340 Ofd1Q80Z25 1017 aa10.01□□□□□ -0.81
Usp54-202ENSMUST00000035340 Trim26Q99PN3 545 aa10.01□□□□□ -0.81
Usp54-202ENSMUST00000035340 Smarca4Q3TKT4 1613 aaKnown RBP10.01□□□□□ -0.81
Usp54-202ENSMUST00000035340 Irx6Q9ER75 438 aa10.01□□□□□ -0.81
Usp54-202ENSMUST00000035340 Rtf1A2AQ19 715 aaKnown RBP10□□□□□ -0.81
Usp54-202ENSMUST00000035340 LrpprcQ6PB66 1392 aaKnown RBP10□□□□□ -0.81
Usp54-202ENSMUST00000035340 Mbd3Q9Z2D8 285 aaKnown RBP10□□□□□ -0.81
Usp54-202ENSMUST00000035340 ArxO35085 564 aa10□□□□□ -0.81
Usp54-202ENSMUST00000035340 HnrnpuQ8VEK3 800 aaKnown RBP10□□□□□ -0.81
Usp54-202ENSMUST00000035340 Smarca2Q6DIC0 1577 aa9.99□□□□□ -0.81
Usp54-202ENSMUST00000035340 Txndc2Q6P902 515 aa9.99□□□□□ -0.81
Usp54-202ENSMUST00000035340 Plekhh2Q8C115 1491 aa9.98□□□□□ -0.81
Usp54-202ENSMUST00000035340 Ppp4r2Q0VGB7 417 aa9.98□□□□□ -0.81
Usp54-202ENSMUST00000035340 Ncoa2Q61026 1462 aa9.97□□□□□ -0.81
Usp54-202ENSMUST00000035340 Pkd2O35245 966 aa9.97□□□□□ -0.81
Usp54-202ENSMUST00000035340 Tmf1B9EKI3 1091 aa9.97□□□□□ -0.81
Usp54-202ENSMUST00000035340 Nup155Q99P88 1391 aaKnown RBP9.95□□□□□ -0.82
Usp54-202ENSMUST00000035340 Hsp90ab1P11499 724 aaKnown RBP9.95□□□□□ -0.82
Usp54-202ENSMUST00000035340 Sart3Q9JLI8 962 aaKnown RBP9.94□□□□□ -0.82
Usp54-202ENSMUST00000035340 Dhx29Q6PGC1 1365 aaKnown RBP9.94□□□□□ -0.82
Usp54-202ENSMUST00000035340 Dnai2A2AC93 623 aa9.94□□□□□ -0.82
Usp54-202ENSMUST00000035340 Kif3bQ61771 747 aa9.94□□□□□ -0.82
Usp54-202ENSMUST00000035340 CenpjQ569L8 1344 aa9.93□□□□□ -0.82
Usp54-202ENSMUST00000035340 Pes1Q9EQ61 584 aaKnown RBP9.93□□□□□ -0.82
Usp54-202ENSMUST00000035340 UacaQ8CGB3 1411 aa9.93□□□□□ -0.82
Usp54-202ENSMUST00000035340 Nol10Q5RJG1 687 aaKnown RBP9.93□□□□□ -0.82
Usp54-202ENSMUST00000035340 PnnO35691 725 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 6.7 ms