RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Hsp90ab1P11499 724 aaKnown RBP18.83■□□□□ 0.61
Col7a1-201ENSMUST00000026740 Ifnlr1Q8CGK5 535 aa18.8■□□□□ 0.6
Col7a1-201ENSMUST00000026740 Map7O88735 730 aa18.75■□□□□ 0.59
Col7a1-201ENSMUST00000026740 Trim30dE9PWL0 497 aa18.72■□□□□ 0.59
Col7a1-201ENSMUST00000026740 Calcoco2A2A6M5 331 aa18.71■□□□□ 0.59
Col7a1-201ENSMUST00000026740 CanxP35564 591 aaKnown RBP18.71■□□□□ 0.59
Col7a1-201ENSMUST00000026740 Csrnp3P59055 597 aa18.71■□□□□ 0.59
Col7a1-201ENSMUST00000026740 Safb2Q80YR5 991 aaKnown RBP18.7■□□□□ 0.58
Col7a1-201ENSMUST00000026740 Ppm1gQ61074 542 aa18.68■□□□□ 0.58
Col7a1-201ENSMUST00000026740 Gm973E9Q295 1059 aa18.68■□□□□ 0.58
Col7a1-201ENSMUST00000026740 PtmsQ9D0J8 101 aaKnown RBP18.67■□□□□ 0.58
Col7a1-201ENSMUST00000026740 Rad21Q61550 635 aaKnown RBP18.66■□□□□ 0.58
Col7a1-201ENSMUST00000026740 Ccdc27Q3V036 639 aa18.65■□□□□ 0.58
Col7a1-201ENSMUST00000026740 Mrs2Q5NCE8 434 aa18.64■□□□□ 0.58
Col7a1-201ENSMUST00000026740 Eid3Q3V124 375 aa18.64■□□□□ 0.57
Col7a1-201ENSMUST00000026740 IqubQ8CDK3 788 aa18.63■□□□□ 0.57
Col7a1-201ENSMUST00000026740 Casc1Q6TDU8 730 aa18.62■□□□□ 0.57
Col7a1-201ENSMUST00000026740 BlmO88700 1416 aa18.6■□□□□ 0.57
Col7a1-201ENSMUST00000026740 Mbd3Q9Z2D8 285 aaKnown RBP18.59■□□□□ 0.57
Col7a1-201ENSMUST00000026740 Vsig10D3YX43 558 aa18.59■□□□□ 0.57
Col7a1-201ENSMUST00000026740 Iqcf3Q9D498 203 aa18.59■□□□□ 0.57
Col7a1-201ENSMUST00000026740 Abcc8B2RUS7 1588 aa18.58■□□□□ 0.56
Col7a1-201ENSMUST00000026740 Rangap1P46061 589 aaKnown RBP18.58■□□□□ 0.56
Col7a1-201ENSMUST00000026740 Cwc22Q8C5N3 908 aaKnown RBP18.56■□□□□ 0.56
Col7a1-201ENSMUST00000026740 Mapk8ip2Q9ERE9 830 aa18.55■□□□□ 0.56
Col7a1-201ENSMUST00000026740 MccE9PWI3 1003 aa18.55■□□□□ 0.56
Col7a1-201ENSMUST00000026740 Tnnt2P50752 301 aa18.54■□□□□ 0.56
Col7a1-201ENSMUST00000026740 Eif4g2Q62448 906 aaKnown RBP18.54■□□□□ 0.56
Col7a1-201ENSMUST00000026740 Wwc2Q6NXJ0 1187 aa18.54■□□□□ 0.56
Col7a1-201ENSMUST00000026740 Pde3bQ61409 1100 aa18.53■□□□□ 0.56
Col7a1-201ENSMUST00000026740 Plcb2A3KGF7 1181 aa18.53■□□□□ 0.56
Col7a1-201ENSMUST00000026740 Pes1Q9EQ61 584 aaKnown RBP18.52■□□□□ 0.55
Col7a1-201ENSMUST00000026740 Mapk8ip3Q9ESN9 1337 aa18.51■□□□□ 0.55
Col7a1-201ENSMUST00000026740 KnstrnQ9D9Z1 312 aaKnown RBP18.51■□□□□ 0.55
Col7a1-201ENSMUST00000026740 NudcO35685 332 aaKnown RBP18.49■□□□□ 0.55
Col7a1-201ENSMUST00000026740 Mak16Q8BGS0 296 aaKnown RBP18.49■□□□□ 0.55
Col7a1-201ENSMUST00000026740 SetQ9EQU5 289 aaKnown RBP18.49■□□□□ 0.55
Col7a1-201ENSMUST00000026740 Dnai2A2AC93 623 aa18.49■□□□□ 0.55
Col7a1-201ENSMUST00000026740 P3h3Q8CG70 732 aa18.46■□□□□ 0.55
Col7a1-201ENSMUST00000026740 Exosc9Q9JHI7 438 aaKnown RBP18.46■□□□□ 0.55
Col7a1-201ENSMUST00000026740 Fkbp15Q6P9Q6 1216 aaKnown RBP18.45■□□□□ 0.54
Col7a1-201ENSMUST00000026740 Gm6268A2A3U9 297 aa18.45■□□□□ 0.54
Col7a1-201ENSMUST00000026740 Sall2Q9QX96 1004 aa18.45■□□□□ 0.54
Col7a1-201ENSMUST00000026740 Ofd1Q80Z25 1017 aa18.45■□□□□ 0.54
Col7a1-201ENSMUST00000026740 Ccdc18Q640L5 1455 aa18.44■□□□□ 0.54
Col7a1-201ENSMUST00000026740 Trim26Q99PN3 545 aa18.4■□□□□ 0.54
Col7a1-201ENSMUST00000026740 Tpm3-rs7D3Z2H9 248 aa18.39■□□□□ 0.53
Col7a1-201ENSMUST00000026740 AU015836B2RUM3 263 aa18.39■□□□□ 0.53
Col7a1-201ENSMUST00000026740 HnrnpuQ8VEK3 800 aaKnown RBP18.39■□□□□ 0.53
Col7a1-201ENSMUST00000026740 Cald1E9QA15 768 aaKnown RBP18.38■□□□□ 0.53
Col7a1-201ENSMUST00000026740 Srpk2O54781 681 aaKnown RBP18.38■□□□□ 0.53
Col7a1-201ENSMUST00000026740 Setd5Q5XJV7 1441 aa18.38■□□□□ 0.53
Col7a1-201ENSMUST00000026740 Mia2Q91ZV0 1396 aa18.37■□□□□ 0.53
Col7a1-201ENSMUST00000026740 Plppr3Q7TPB0 716 aa18.37■□□□□ 0.53
Col7a1-201ENSMUST00000026740 MsnP26041 577 aaKnown RBP18.35■□□□□ 0.53
Col7a1-201ENSMUST00000026740 Chic2Q9D9G3 165 aa18.34■□□□□ 0.53
Col7a1-201ENSMUST00000026740 Eea1Q8BL66 1411 aa18.33■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Ubl4bQ9CQ84 188 aa18.32■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Arid4bA2CG63 1314 aaKnown RBP18.31■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Gm38655A0A286YDK6 273 aa18.31■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Rgl3Q3UYI5 709 aa18.31■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Fhad1A6PWD2 1420 aa18.3■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Sh3bp5Q9Z131 463 aa18.3■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Irx3P81067 507 aa18.3■□□□□ 0.52
Col7a1-201ENSMUST00000026740 RdxP26043 583 aaKnown RBP18.29■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Mtus2Q3UHD3 1353 aa18.29■□□□□ 0.52
Col7a1-201ENSMUST00000026740 4933402E13RikQ9D4D2 429 aa18.28■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Ercc6F8VPZ5 1481 aa18.27■□□□□ 0.52
Col7a1-201ENSMUST00000026740 Mroh3A0A1D5RM54 893 aa18.27■□□□□ 0.51
Col7a1-201ENSMUST00000026740 R3hcc1Q8BSI6 488 aa18.26■□□□□ 0.51
Col7a1-201ENSMUST00000026740 Card11Q8CIS0 1159 aa18.26■□□□□ 0.51
Col7a1-201ENSMUST00000026740 Hsp90b1P08113 802 aaKnown RBP18.26■□□□□ 0.51
Col7a1-201ENSMUST00000026740 Map7d2A2AG50 781 aa18.24■□□□□ 0.51
Col7a1-201ENSMUST00000026740 Sart3Q9JLI8 962 aaKnown RBP18.24■□□□□ 0.51
Col7a1-201ENSMUST00000026740 Smarce1O54941 411 aaKnown RBP18.23■□□□□ 0.51
Col7a1-201ENSMUST00000026740 Erich6bQ9D4S6 220 aa18.23■□□□□ 0.51
Col7a1-201ENSMUST00000026740 Anapc15P60007 132 aa18.22■□□□□ 0.51
Col7a1-201ENSMUST00000026740 Rsf1E9PWW9 1441 aaKnown RBP18.22■□□□□ 0.51
Col7a1-201ENSMUST00000026740 Baz1aO88379 1555 aa18.19■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Rwdd1Q9CQK7 243 aa18.19■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Znf316Q6PGE4 1016 aa18.19■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Gm20521D3Z5F7 333 aa18.18■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Clstn1Q9EPL2 979 aa18.18■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Irx6Q9ER75 438 aa18.16■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Rassf8Q8CJ96 419 aa18.15■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Kdm2aP59997 1161 aa18.15■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Stag3O70576 1240 aa18.14■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Nol10Q5RJG1 687 aaKnown RBP18.14■□□□□ 0.5
Col7a1-201ENSMUST00000026740 Fam71e1A1L3C1 212 aa18.13■□□□□ 0.49
Col7a1-201ENSMUST00000026740 NacadQ5SWP3 1504 aa18.12■□□□□ 0.49
Col7a1-201ENSMUST00000026740 Atp6v1dP57746 247 aa18.11■□□□□ 0.49
Col7a1-201ENSMUST00000026740 Rtf1A2AQ19 715 aaKnown RBP18.11■□□□□ 0.49
Col7a1-201ENSMUST00000026740 Tcerg1Q8CGF7 1100 aaKnown RBP18.1■□□□□ 0.49
Col7a1-201ENSMUST00000026740 Dnttip2Q8R2M2 758 aaKnown RBP18.1■□□□□ 0.49
Col7a1-201ENSMUST00000026740 Rrp12Q6P5B0 1295 aaKnown RBP18.1■□□□□ 0.49
Col7a1-201ENSMUST00000026740 Pcmtd1P59913 357 aa18.09■□□□□ 0.49
Col7a1-201ENSMUST00000026740 Cspp1B2RX88 1205 aa18.08■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Tpm3P21107 285 aaKnown RBP18.07■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Ftsj3Q9DBE9 838 aaKnown RBP18.07■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Dnai1Q8C0M8 701 aa18.07■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms