RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Hsp90ab1P11499 724 aaKnown RBP18,83■□□□□ 0,61
Col7a1-201ENSMUST00000026740 Ifnlr1Q8CGK5 535 aa18,8■□□□□ 0,6
Col7a1-201ENSMUST00000026740 Map7O88735 730 aa18,75■□□□□ 0,59
Col7a1-201ENSMUST00000026740 Trim30dE9PWL0 497 aa18,72■□□□□ 0,59
Col7a1-201ENSMUST00000026740 Calcoco2A2A6M5 331 aa18,71■□□□□ 0,59
Col7a1-201ENSMUST00000026740 CanxP35564 591 aaKnown RBP18,71■□□□□ 0,59
Col7a1-201ENSMUST00000026740 Csrnp3P59055 597 aa18,71■□□□□ 0,59
Col7a1-201ENSMUST00000026740 Safb2Q80YR5 991 aaKnown RBP18,7■□□□□ 0,58
Col7a1-201ENSMUST00000026740 Ppm1gQ61074 542 aa18,68■□□□□ 0,58
Col7a1-201ENSMUST00000026740 Gm973E9Q295 1059 aa18,68■□□□□ 0,58
Col7a1-201ENSMUST00000026740 PtmsQ9D0J8 101 aaKnown RBP18,67■□□□□ 0,58
Col7a1-201ENSMUST00000026740 Rad21Q61550 635 aaKnown RBP18,66■□□□□ 0,58
Col7a1-201ENSMUST00000026740 Ccdc27Q3V036 639 aa18,65■□□□□ 0,58
Col7a1-201ENSMUST00000026740 Mrs2Q5NCE8 434 aa18,64■□□□□ 0,58
Col7a1-201ENSMUST00000026740 Eid3Q3V124 375 aa18,64■□□□□ 0,57
Col7a1-201ENSMUST00000026740 IqubQ8CDK3 788 aa18,63■□□□□ 0,57
Col7a1-201ENSMUST00000026740 Casc1Q6TDU8 730 aa18,62■□□□□ 0,57
Col7a1-201ENSMUST00000026740 BlmO88700 1416 aa18,6■□□□□ 0,57
Col7a1-201ENSMUST00000026740 Mbd3Q9Z2D8 285 aaKnown RBP18,59■□□□□ 0,57
Col7a1-201ENSMUST00000026740 Vsig10D3YX43 558 aa18,59■□□□□ 0,57
Col7a1-201ENSMUST00000026740 Iqcf3Q9D498 203 aa18,59■□□□□ 0,57
Col7a1-201ENSMUST00000026740 Abcc8B2RUS7 1588 aa18,58■□□□□ 0,56
Col7a1-201ENSMUST00000026740 Rangap1P46061 589 aaKnown RBP18,58■□□□□ 0,56
Col7a1-201ENSMUST00000026740 Cwc22Q8C5N3 908 aaKnown RBP18,56■□□□□ 0,56
Col7a1-201ENSMUST00000026740 Mapk8ip2Q9ERE9 830 aa18,55■□□□□ 0,56
Col7a1-201ENSMUST00000026740 MccE9PWI3 1003 aa18,55■□□□□ 0,56
Col7a1-201ENSMUST00000026740 Tnnt2P50752 301 aa18,54■□□□□ 0,56
Col7a1-201ENSMUST00000026740 Eif4g2Q62448 906 aaKnown RBP18,54■□□□□ 0,56
Col7a1-201ENSMUST00000026740 Wwc2Q6NXJ0 1187 aa18,54■□□□□ 0,56
Col7a1-201ENSMUST00000026740 Pde3bQ61409 1100 aa18,53■□□□□ 0,56
Col7a1-201ENSMUST00000026740 Plcb2A3KGF7 1181 aa18,53■□□□□ 0,56
Col7a1-201ENSMUST00000026740 Pes1Q9EQ61 584 aaKnown RBP18,52■□□□□ 0,55
Col7a1-201ENSMUST00000026740 Mapk8ip3Q9ESN9 1337 aa18,51■□□□□ 0,55
Col7a1-201ENSMUST00000026740 KnstrnQ9D9Z1 312 aaKnown RBP18,51■□□□□ 0,55
Col7a1-201ENSMUST00000026740 NudcO35685 332 aaKnown RBP18,49■□□□□ 0,55
Col7a1-201ENSMUST00000026740 Mak16Q8BGS0 296 aaKnown RBP18,49■□□□□ 0,55
Col7a1-201ENSMUST00000026740 SetQ9EQU5 289 aaKnown RBP18,49■□□□□ 0,55
Col7a1-201ENSMUST00000026740 Dnai2A2AC93 623 aa18,49■□□□□ 0,55
Col7a1-201ENSMUST00000026740 P3h3Q8CG70 732 aa18,46■□□□□ 0,55
Col7a1-201ENSMUST00000026740 Exosc9Q9JHI7 438 aaKnown RBP18,46■□□□□ 0,55
Col7a1-201ENSMUST00000026740 Fkbp15Q6P9Q6 1216 aaKnown RBP18,45■□□□□ 0,54
Col7a1-201ENSMUST00000026740 Gm6268A2A3U9 297 aa18,45■□□□□ 0,54
Col7a1-201ENSMUST00000026740 Sall2Q9QX96 1004 aa18,45■□□□□ 0,54
Col7a1-201ENSMUST00000026740 Ofd1Q80Z25 1017 aa18,45■□□□□ 0,54
Col7a1-201ENSMUST00000026740 Ccdc18Q640L5 1455 aa18,44■□□□□ 0,54
Col7a1-201ENSMUST00000026740 Trim26Q99PN3 545 aa18,4■□□□□ 0,54
Col7a1-201ENSMUST00000026740 Tpm3-rs7D3Z2H9 248 aa18,39■□□□□ 0,53
Col7a1-201ENSMUST00000026740 AU015836B2RUM3 263 aa18,39■□□□□ 0,53
Col7a1-201ENSMUST00000026740 HnrnpuQ8VEK3 800 aaKnown RBP18,39■□□□□ 0,53
Col7a1-201ENSMUST00000026740 Cald1E9QA15 768 aaKnown RBP18,38■□□□□ 0,53
Col7a1-201ENSMUST00000026740 Srpk2O54781 681 aaKnown RBP18,38■□□□□ 0,53
Col7a1-201ENSMUST00000026740 Setd5Q5XJV7 1441 aa18,38■□□□□ 0,53
Col7a1-201ENSMUST00000026740 Mia2Q91ZV0 1396 aa18,37■□□□□ 0,53
Col7a1-201ENSMUST00000026740 Plppr3Q7TPB0 716 aa18,37■□□□□ 0,53
Col7a1-201ENSMUST00000026740 MsnP26041 577 aaKnown RBP18,35■□□□□ 0,53
Col7a1-201ENSMUST00000026740 Chic2Q9D9G3 165 aa18,34■□□□□ 0,53
Col7a1-201ENSMUST00000026740 Eea1Q8BL66 1411 aa18,33■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Ubl4bQ9CQ84 188 aa18,32■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Arid4bA2CG63 1314 aaKnown RBP18,31■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Gm38655A0A286YDK6 273 aa18,31■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Rgl3Q3UYI5 709 aa18,31■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Fhad1A6PWD2 1420 aa18,3■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Sh3bp5Q9Z131 463 aa18,3■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Irx3P81067 507 aa18,3■□□□□ 0,52
Col7a1-201ENSMUST00000026740 RdxP26043 583 aaKnown RBP18,29■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Mtus2Q3UHD3 1353 aa18,29■□□□□ 0,52
Col7a1-201ENSMUST00000026740 4933402E13RikQ9D4D2 429 aa18,28■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Ercc6F8VPZ5 1481 aa18,27■□□□□ 0,52
Col7a1-201ENSMUST00000026740 Mroh3A0A1D5RM54 893 aa18,27■□□□□ 0,51
Col7a1-201ENSMUST00000026740 R3hcc1Q8BSI6 488 aa18,26■□□□□ 0,51
Col7a1-201ENSMUST00000026740 Card11Q8CIS0 1159 aa18,26■□□□□ 0,51
Col7a1-201ENSMUST00000026740 Hsp90b1P08113 802 aaKnown RBP18,26■□□□□ 0,51
Col7a1-201ENSMUST00000026740 Map7d2A2AG50 781 aa18,24■□□□□ 0,51
Col7a1-201ENSMUST00000026740 Sart3Q9JLI8 962 aaKnown RBP18,24■□□□□ 0,51
Col7a1-201ENSMUST00000026740 Smarce1O54941 411 aaKnown RBP18,23■□□□□ 0,51
Col7a1-201ENSMUST00000026740 Erich6bQ9D4S6 220 aa18,23■□□□□ 0,51
Col7a1-201ENSMUST00000026740 Anapc15P60007 132 aa18,22■□□□□ 0,51
Col7a1-201ENSMUST00000026740 Rsf1E9PWW9 1441 aaKnown RBP18,22■□□□□ 0,51
Col7a1-201ENSMUST00000026740 Baz1aO88379 1555 aa18,19■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Rwdd1Q9CQK7 243 aa18,19■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Znf316Q6PGE4 1016 aa18,19■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Gm20521D3Z5F7 333 aa18,18■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Clstn1Q9EPL2 979 aa18,18■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Irx6Q9ER75 438 aa18,16■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Rassf8Q8CJ96 419 aa18,15■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Kdm2aP59997 1161 aa18,15■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Stag3O70576 1240 aa18,14■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Nol10Q5RJG1 687 aaKnown RBP18,14■□□□□ 0,5
Col7a1-201ENSMUST00000026740 Fam71e1A1L3C1 212 aa18,13■□□□□ 0,49
Col7a1-201ENSMUST00000026740 NacadQ5SWP3 1504 aa18,12■□□□□ 0,49
Col7a1-201ENSMUST00000026740 Atp6v1dP57746 247 aa18,11■□□□□ 0,49
Col7a1-201ENSMUST00000026740 Rtf1A2AQ19 715 aaKnown RBP18,11■□□□□ 0,49
Col7a1-201ENSMUST00000026740 Tcerg1Q8CGF7 1100 aaKnown RBP18,1■□□□□ 0,49
Col7a1-201ENSMUST00000026740 Dnttip2Q8R2M2 758 aaKnown RBP18,1■□□□□ 0,49
Col7a1-201ENSMUST00000026740 Rrp12Q6P5B0 1295 aaKnown RBP18,1■□□□□ 0,49
Col7a1-201ENSMUST00000026740 Pcmtd1P59913 357 aa18,09■□□□□ 0,49
Col7a1-201ENSMUST00000026740 Cspp1B2RX88 1205 aa18,08■□□□□ 0,48
Col7a1-201ENSMUST00000026740 Tpm3P21107 285 aaKnown RBP18,07■□□□□ 0,48
Col7a1-201ENSMUST00000026740 Ftsj3Q9DBE9 838 aaKnown RBP18,07■□□□□ 0,48
Col7a1-201ENSMUST00000026740 Dnai1Q8C0M8 701 aa18,07■□□□□ 0,48
Retrieved 100 of 22,080 RNA–protein pairs in 11,1 ms